You are here

Home

KJC3_002050-T1, KJC3_002050-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_002050-T1
Unique NameKJC3_002050-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:1536747..1537976+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_002050-T1 ID=KJC3_002050-T1|Name=KJC3_002050-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1230bp|location=Sequence derived from alignment at ch2:1536747..1537976+ (Aspergillus niger KJC3)
ATGTCGACATGGATGCAGAATGCTGAAGAAGCGTCGAAAGATAGTGGGAA
GCGCCGACTATCTGGACGCATACATATCCTAGGCCTTGGGAATGTAGGCA
CATTCGTTGCCCACTCTCTCGCAAGTCGTCCGTCTCCTCCGCCTGTCACT
CTACTCTTGCATAACCCCAATCTGTACAAGTCATGGCTGGGGAGGAAAAA
GTGCTTAGCGATTAACTCGAATGGATTGGACGATATCAAGACGGGCTTCG
ATGTCAATGTCCTGAATGGCAAAACATGGCACGCATTCCCATACTGGGAT
AAAAACGGGAAGAACGGGGAAGCCATTGCTCGAGCAGACGAGATCGATGT
TGAAGGGTCCCTGGCCGAGTCTGTCCAAGATGAGGAGCGCATTGAATGCT
TGGTCGTTAGTGTCAAGGCGCCGGTGACAGCTATGGCTTTGGAATCTGTT
AAGCATCGTTTGACACCCGACTCTACGGTCCTACTACTTCAGAACGGCAT
GGGCGTCATCGATGAGCTCAACGAAAAGGTCTTCCCTGATCCCCGCAAAC
GCCCGAACTACATGCAAGGCATTGTCTCGCATGGGTTGGCTCGCAGGAAA
GAACCCTTCCAAGTCGCCCATACGGGCATCGGCACGACCATCCTGGGACC
GGCATTGCCCTCGAACTCAACATCTCCGATCAGTGAAAACGAGGATGACT
GGGCCGCTAGCACCAAGTATCTCCTGCGGACCATGACTCTCACTCCTCCA
CTGGTTGCTGTCGCGGAGACTCCGTCCGCTCTTATGCTCTACCAGCTTGA
GAAGTTGGCAATGAACGCTGTCATTAATCCGTTGACGGCATTGATGAACT
GCGAGAATGGCGAGCTTCTCTACAACTACAGTCTCACGCGCGTGACGCGA
TTGCTTCTTCATGAGATTTCGAGCGTGATCTGCGCCCTTCCCGAACTACA
GGGCATCCCTGGTATCGAGAGCCGATTCTCCCCGGAACGACTGCGCTGGA
TGGTTACTCAGCTTGCCAGCAAGACAGCAAAGAACCACAGCTCCATGCTG
CAGGACGTACGAGCCGGCAAGACGACCGAGATTGAATACCTAAACGGCTA
CATTGTGCGCAGAGGCGAAGAGCTCGGTATCAAGTGCGTGGTGAACTACA
TGATGAAGCACCTGGTTCTGGGCAAGCAGCACACGTCGAAGCAAAGAGAT
GCCAGCGCCATCCCGATCGACATTTTGTAG
back to top

Coding sequence (CDS) from alignment at ch2:1536747..1537976+

>KJC3_002050-T1 ID=KJC3_002050-T1|Name=KJC3_002050-T1|organism=Aspergillus niger KJC3|type=CDS|length=1230bp|location=Sequence derived from alignment at ch2:1536747..1537976+ (Aspergillus niger KJC3)
ATGTCGACATGGATGCAGAATGCTGAAGAAGCGTCGAAAGATAGTGGGAA
GCGCCGACTATCTGGACGCATACATATCCTAGGCCTTGGGAATGTAGGCA
CATTCGTTGCCCACTCTCTCGCAAGTCGTCCGTCTCCTCCGCCTGTCACT
CTACTCTTGCATAACCCCAATCTGTACAAGTCATGGCTGGGGAGGAAAAA
GTGCTTAGCGATTAACTCGAATGGATTGGACGATATCAAGACGGGCTTCG
ATGTCAATGTCCTGAATGGCAAAACATGGCACGCATTCCCATACTGGGAT
AAAAACGGGAAGAACGGGGAAGCCATTGCTCGAGCAGACGAGATCGATGT
TGAAGGGTCCCTGGCCGAGTCTGTCCAAGATGAGGAGCGCATTGAATGCT
TGGTCGTTAGTGTCAAGGCGCCGGTGACAGCTATGGCTTTGGAATCTGTT
AAGCATCGTTTGACACCCGACTCTACGGTCCTACTACTTCAGAACGGCAT
GGGCGTCATCGATGAGCTCAACGAAAAGGTCTTCCCTGATCCCCGCAAAC
GCCCGAACTACATGCAAGGCATTGTCTCGCATGGGTTGGCTCGCAGGAAA
GAACCCTTCCAAGTCGCCCATACGGGCATCGGCACGACCATCCTGGGACC
GGCATTGCCCTCGAACTCAACATCTCCGATCAGTGAAAACGAGGATGACT
GGGCCGCTAGCACCAAGTATCTCCTGCGGACCATGACTCTCACTCCTCCA
CTGGTTGCTGTCGCGGAGACTCCGTCCGCTCTTATGCTCTACCAGCTTGA
GAAGTTGGCAATGAACGCTGTCATTAATCCGTTGACGGCATTGATGAACT
GCGAGAATGGCGAGCTTCTCTACAACTACAGTCTCACGCGCGTGACGCGA
TTGCTTCTTCATGAGATTTCGAGCGTGATCTGCGCCCTTCCCGAACTACA
GGGCATCCCTGGTATCGAGAGCCGATTCTCCCCGGAACGACTGCGCTGGA
TGGTTACTCAGCTTGCCAGCAAGACAGCAAAGAACCACAGCTCCATGCTG
CAGGACGTACGAGCCGGCAAGACGACCGAGATTGAATACCTAAACGGCTA
CATTGTGCGCAGAGGCGAAGAGCTCGGTATCAAGTGCGTGGTGAACTACA
TGATGAAGCACCTGGTTCTGGGCAAGCAGCACACGTCGAAGCAAAGAGAT
GCCAGCGCCATCCCGATCGACATTTTGTAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
GO:00086772-dehydropantoate 2-reductase activity
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
GO:0015940pantothenate biosynthetic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_002050KJC3_002050Aspergillus niger KJC3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002050-T1.exon1KJC3_002050-T1.exon1Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002050-T1.cdsKJC3_002050-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002050-T1KJC3_002050-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR008927
DBxrefInterPro:IPR013332
DBxrefInterPro:IPR013328
DBxrefInterPro:IPR003710
DBxrefInterPro:IPR013752
DBxrefPFAM:PF08546
DBxrefPFAM:PF02558
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:1536747..1537976 +
Powered by Drupal