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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:1543363..1546884+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_002054-T1 ID=KJC3_002054-T1|Name=KJC3_002054-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3522bp|location=Sequence derived from alignment at ch2:1543363..1546884+ (Aspergillus niger KJC3)
TGTTACTCTCTGGTCGTCGTCGTCGACCTCTTCTTATTCTCCTCATTTGT
TCTTCCCCCCGGTCGCTGACCACCTTTTTCTATCTATAATCTACTTTTAA
CTAATTTTACTAGCTTACACTAATCTTCCCACTAAATTCCATCATCTGCC
TTGACGAAAGAGGGGTTACGTCCACTGATTACCCGCTAAGACGTCTCTCC
CTTCCTTTATCTCCCTCAACCGGCTCTCGCCTCCAGTTAATCGTCATCCT
TCCGGTCTATCCTTCCCTACTTATCGCAGCCTCTCGTTCATCCACCCCCT
CTTTCAGCGGCTTCCGCTCTCTATCGAATTGCATTTCGCTCCTTTTCTGC
GACTCAATGCTTCGTTCCCCGACTGGCTGATTCCTCTCCAGTCTGCGCGC
TGGCGGGGACGTCACGTTACTGCTTCCCCCCCTGCTTTAATCCTTTCATG
CATATACCCTCAACCAGCCCTTGTCTCTGCCAGGATTTGCAGATGCGAAG
CGTTGCCGGTCTGTTATATACGTGGTTGTGATACGCGCCTCCTTCTGCTG
TGATACCCTGTTCTGCTGCATCTGCCGTGTCGACATCTCACGATCACCAT
GGCCGAGTATGTATATTCACGCACCTCCAATGCAGTTAGCCTATGCTGTG
TTTGCTTGCTAATATTGGTGGCAGTTTTATTGCTTTCCATACTTATTACT
CTCGCCACAACTTCCTATCCCCGTCTACGATGCTGCCACGCCCCACCAGC
CACAAACGGTCGAATTCCTCCGAGAACAATTCTCTCTCCCCCGACAAGAC
CGTCACGAAAGCCAGATCCACCAATGATTTGTCTGGAACTGCCACTGCGA
AACCGACACCGGGCGTCCGCTCGTCCAGTGTCGGCAATTTCCAGGAAACC
AGCTTTAGCACTCTGAAAGACCCCAGACTTGCGAGCCACTCGGAAGACTC
GGAGACGCCAGAGTCAACTCAGTCGCATCATCCAGACCTGAGCAATGAGG
TTGCAGCGTTGAGCGTCAAGTTGGTCCAGGCGATCAACAATCAGACAACG
CTCGATGACAACCTAGTTGCCACTCGTCAGGAATTGGAGCAGGCACAAGC
CAAGATCCGAGTCCTTGAGTTGGAAAACGAAAAGTACCAGCGAGACATTG
ATCAGGAAGTCTTGATCAAGAAGTCCGACGTGGACTACGAGATGTTGCGC
TTACAAGCTGCCTTGGCTGAAGAGAAGGCTCAGCGCGCCCTTGTGGAAAA
GGAGAAGAAGGGCATTGAACAAGAATTAGAAACACTAACTGCCGCGCTTT
TTGAAGAGGCCAACAAGGTAAGCTCCCTCGGCGTTTGTACGGTTGAGTCG
ATCAATTGACTTATTACCTTTTGAACAGATGGTCGCAGCGGCCAAGCTTG
AGCGTGAGGCCGTAGAAAAGAAAAACGAGCAGCTGCGCTCGCAAGTCAAA
GATACCGAAGCACTGCTTGCATCGCATCAAGAACAATTGGCCGAGTTAAA
GTCCGTCTTGCAGGGACTCAACATCGCCAAGGAGGATAGTGAGACTCGCA
CAATCATCTCGACAGCTCCGTCATCACCAACTATGCCGCGGCATCCTTTG
CACATCAGCAAGAATTCTGATATCCCCGACATACCAGAGGAGATCCCAAC
TCTAGAAGAGCTCACTCCAGGACCGTCCACCAGTTTCCCCCATCTGATCA
AGCCGGTCTGTCGAACCGATATTCAAGCTTACGAGGATTTTCGGGAACTC
TTCACTACATCTCGAGCTTCCAAGCCTGCCAGTCGGGCCACAAGTGGGTC
TTACACTGGCTTGAACGTCATGAGCTTGGCTAGTGGGTTCGGTTCAGCGT
CGTCATCTCCCGCCAAATCTCAAACACATTCTCCTAATGGAAGCGTGTCT
TCCCCACAGCCCGTGACTTCCCATATTCCTCTCAAGGAGACCCGCTTCTA
CAAGCGCGTGCTTTCGGAAGACATCGAACCGACCCTCCGGCTTGATGCTG
CGCCCGGGATCTCATGGCTAACGCGGCGCTCAGTATTGAGCGGGATCTGC
GATGGAACTCTCCTGGTCGAGCCCATGCCGCCTTCAGCAAAGAAATATGA
GTTTCCTTGTTCAATGTGTGGCGAGCGCCGAAACGGTCCCACCAACGAGA
GGACCCATCGGTTCCGGACGTCCGATAGCGAGACCGCCCAGCGATATCCG
CTGTGTGTACTGTGTTTAGAGAGAGTCCGTTCCAGCTGCGAGTTCACTGG
ATACCTCCGTCTCATCCTTGACGGCCATGTCCGCATTGGCGATGCCGAAG
AGGAGAAGGATGCATGGGATGAAACTATCCGGCTAAGAGAGAGAATGTTC
TGGTCACGCATCGGAGGTGGAATTATCCCTTTGTTTGCTCACGCCAATGG
CTTCCAAGGCAATATCCCTACATCTACTGAAAATGTTGAGGCTCCGGTTG
CCGATGGTCGTGATGATTGCCAGCGGTCAATCATCTCCACCGTCCCCGAG
GATATCACCATAGAAACAAAGAACCTAGACGAGATTGACGAGCACAACCA
TGACGAGGGTTCCGTGGCTGACGATCCGTTTGTGTCTGCTCCCTCCGAGT
CAGAATCTACAGCCAGCAGCGCGGCGGTCTCTCCCACGGATGCTAGCGCA
CCCGTCGTGAAGACAGACCTCGTTGATGACATGCACGAACAGCCTGATGT
GCAGGTTGTCGTTCCTGAACCTACACATGATGAAGCTGATAGCGTTAAGC
TCCCAACTCAAGTTGAGGAGACGCCAATCAACCACGACACCACAAAACAT
GGTGATAACTGATATGATCAATGCTGATTTGACCCACGATTCTTATCGTT
CGATGACGCGGACGTTCTACCGTTGTCTTGCACTCTACTTGGGTTTCGAT
TTCGGGTTCCGACTACATTTGCGCGGTCCCACCCTTTTTCAAACTTCATC
TTCTTCCCATATACCGGTATAATTCAGCCATGCCTGCTTGCTTAATTCCT
CACCGATCCTGTCCTTTGCATCCGAGACATATTATCAGTCAAGAGCGGCA
TGGGGTATGTATTATTAATACCTTGTTCTTTCTTGTTTCTCCTTTGTATA
CATATTTTCGTTTCTATTGGGTTTGATTTCAATTCTTGTGTATCTCGTTT
TCCCCCAAGTTTCTTTACCTTTTCGCGTTTGTACCTCCTTGCACCTCTTG
TTCGCTAAACGCTATCGGGATGCAAATGTTTTCGATGCGCGAAGGTACTC
CTGGATGAACTACGACCTCGCATTTCAGTGAATTCTGCGTTTCTTTGTTA
CATGGAATAGGGTCCTTCCGGCCCTTTCCAATTCTGCAGCATACATTTCT
TTCTGTTGCTATTCCCCCGGTGCATCCAATTGCGATTGTTCCTTTTTACG
CGATATACATGGTGGCAGAGATCTCAAGATCATGGGGCGGAAGATGCAGA
AATTCAAGGCGGTGGCTTTACCTGCACATGGTAGCATTAGGTAAAGCAAA
AATTCATGATATACTCGAGATA back to topCoding sequence (CDS) from alignment at ch2:1543363..1546884+ >KJC3_002054-T1 ID=KJC3_002054-T1|Name=KJC3_002054-T1|organism=Aspergillus niger KJC3|type=CDS|length=6255bp|location=Sequence derived from alignment at ch2:1543363..1546884+ (Aspergillus niger KJC3)
ATGGCCGATTTTATTGCTTTCCATACTTATTACTCTCGCCACAACTTCCT
ATCCCCGTCTACGATGCTGCCACGCCCCACCAGCCACAAACGGTCGAATT
CCTCCGAGAACAATTCTCTCTCCCCCGACAAGACCGTCACGAAAGCCAGA
TCCACCAATGATTTGTCTGGAACTGCCACTGCGAAACCGACACCGGGCGT
CCGCTCGTCCAGTGTCGGCAATTTCCAGGAAACCAGCTTTAGCACTCTGA
AAGACCCCAGACTTGCGAGCCACTCGGAAGACTCGGAGACGCCAGAGTCA
ACTCAGTCGCATCATCCAGACCTGAGCAATGAGGTTGCAGCGTTGAGCGT
CAAGTTGGTCCAGGCGATCAACAATCAGACAACGCTCGATGACAACCTAG
TTGCCACTCGTCAGGAATTGGAGCAGGCACAAGCCAAGATCCGAGTCCTT
GAGTTGGAAAACGAAAAGTACCAGCGAGACATTGATCAGGAAGTCTTGAT
CAAGAAGTCCGACGTGGACTACGAGATGTTGCGCTTACAAGCTGCCTTGG
CTGAAGAGAAGGCTCAGCGCGCCCTTGTGGAAAAGGAGAAGAAGGGCATT
GAACAAGAATTAGAAACACTAACTGCCGCGCTTTTTGAAGAGGCCAACAA
GATGGTCGCAGCGGCCAAGCTTGAGCGTGAGGCCGTAGAAAAGAAAAACG
AGCAGCTGCGCTCGCAAGTCAAAGATACCGAAGCACTGCTTGCATCGCAT
CAAGAACAATTGGCCGAGTTAAAGTCCGTCTTGCAGGGACTCAACATCGC
CAAGGAGGATAGTGAGACTCGCACAATCATCTCGACAGCTCCGTCATCAC
CAACTATGCCGCGGCATCCTTTGCACATCAGCAAGAATTCTGATATCCCC
GACATACCAGAGGAGATCCCAACTCTAGAAGAGCTCACTCCAGGACCGTC
CACCAGTTTCCCCCATCTGATCAAGCCGGTCTGTCGAACCGATATTCAAG
CTTACGAGGATTTTCGGGAACTCTTCACTACATCTCGAGCTTCCAAGCCT
GCCAGTCGGGCCACAAGTGGGTCTTACACTGGCTTGAACGTCATGAGCTT
GGCTAGTGGGTTCGGTTCAGCGTCGTCATCTCCCGCCAAATCTCAAACAC
ATTCTCCTAATGGAAGCGTGTCTTCCCCACAGCCCGTGACTTCCCATATT
CCTCTCAAGGAGACCCGCTTCTACAAGCGCGTGCTTTCGGAAGACATCGA
ACCGACCCTCCGGCTTGATGCTGCGCCCGGGATCTCATGGCTAACGCGGC
GCTCAGTATTGAGCGGGATCTGCGATGGAACTCTCCTGGTCGAGCCCATG
CCGCCTTCAGCAAAGAAATATGAGTTTCCTTGTTCAATGTGTGGCGAGCG
CCGAAACGGTCCCACCAACGAGAGGACCCATCGGTTCCGGACGTCCGATA
GCGAGACCGCCCAGCGATATCCGCTGTGTGTACTGTGTTTAGAGAGAGTC
CGTTCCAGCTGCGAGTTCACTGGATACCTCCGTCTCATCCTTGACGGCCA
TGTCCGCATTGGCGATGCCGAAGAGGAGAAGGATGCATGGGATGAAACTA
TCCGGCTAAGAGAGAGAATGTTCTGGTCACGCATCGGAGGTGGAATTATC
CCTTTGTTTGCTCACGCCAATGGCTTCCAAGGCAATATCCCTACATCTAC
TGAAAATGTTGAGGCTCCGGTTGCCGATGGTCGTGATGATTGCCAGCGGT
CAATCATCTCCACCGTCCCCGAGGATATCACCATAGAAACAAAGAACCTA
GACGAGATTGACGAGCACAACCATGACGAGGGTTCCGTGGCTGACGATCC
GTTTGTGTCTGCTCCCTCCGAGTCAGAATCTACAGCCAGCAGCGCGGCGG
TCTCTCCCACGGATGCTAGCGCACCCGTCGTGAAGACAGACCTCGTTGAT
GACATGCACGAACAGCCTGATGTGCAGGTTGTCGTTCCTGAACCTACACA
TGATGAAGCTGATAGCGTTAAGCTCCCAACTCAAGTTGAGGAGACGCCAA
TCAACCACGACACCACAAAACATGGTGATAACTGAATGGCCGATTTTATT
GCTTTCCATACTTATTACTCTCGCCACAACTTCCTATCCCCGTCTACGAT
GCTGCCACGCCCCACCAGCCACAAACGGTCGAATTCCTCCGAGAACAATT
CTCTCTCCCCCGACAAGACCGTCACGAAAGCCAGATCCACCAATGATTTG
TCTGGAACTGCCACTGCGAAACCGACACCGGGCGTCCGCTCGTCCAGTGT
CGGCAATTTCCAGGAAACCAGCTTTAGCACTCTGAAAGACCCCAGACTTG
CGAGCCACTCGGAAGACTCGGAGACGCCAGAGTCAACTCAGTCGCATCAT
CCAGACCTGAGCAATGAGGTTGCAGCGTTGAGCGTCAAGTTGGTCCAGGC
GATCAACAATCAGACAACGCTCGATGACAACCTAGTTGCCACTCGTCAGG
AATTGGAGCAGGCACAAGCCAAGATCCGAGTCCTTGAGTTGGAAAACGAA
AAGTACCAGCGAGACATTGATCAGGAAGTCTTGATCAAGAAGTCCGACGT
GGACTACGAGATGTTGCGCTTACAAGCTGCCTTGGCTGAAGAGAAGGCTC
AGCGCGCCCTTGTGGAAAAGGAGAAGAAGGGCATTGAACAAGAATTAGAA
ACACTAACTGCCGCGCTTTTTGAAGAGGCCAACAAGATGGTCGCAGCGGC
CAAGCTTGAGCGTGAGGCCGTAGAAAAGAAAAACGAGCAGCTGCGCTCGC
AAGTCAAAGATACCGAAGCACTGCTTGCATCGCATCAAGAACAATTGGCC
GAGTTAAAGTCCGTCTTGCAGGGACTCAACATCGCCAAGGAGGATAGTGA
GACTCGCACAATCATCTCGACAGCTCCGTCATCACCAACTATGCCGCGGC
ATCCTTTGCACATCAGCAAGAATTCTGATATCCCCGACATACCAGAGGAG
ATCCCAACTCTAGAAGAGCTCACTCCAGGACCGTCCACCAGTTTCCCCCA
TCTGATCAAGCCGGTCTGTCGAACCGATATTCAAGCTTACGAGGATTTTC
GGGAACTCTTCACTACATCTCGAGCTTCCAAGCCTGCCAGTCGGGCCACA
AGTGGGTCTTACACTGGCTTGAACGTCATGAGCTTGGCTAGTGGGTTCGG
TTCAGCGTCGTCATCTCCCGCCAAATCTCAAACACATTCTCCTAATGGAA
GCGTGTCTTCCCCACAGCCCGTGACTTCCCATATTCCTCTCAAGGAGACC
CGCTTCTACAAGCGCGTGCTTTCGGAAGACATCGAACCGACCCTCCGGCT
TGATGCTGCGCCCGGGATCTCATGGCTAACGCGGCGCTCAGTATTGAGCG
GGATCTGCGATGGAACTCTCCTGGTCGAGCCCATGCCGCCTTCAGCAAAG
AAATATGAGTTTCCTTGTTCAATGTGTGGCGAGCGCCGAAACGGTCCCAC
CAACGAGAGGACCCATCGGTTCCGGACGTCCGATAGCGAGACCGCCCAGC
GATATCCGCTGTGTGTACTGTGTTTAGAGAGAGTCCGTTCCAGCTGCGAG
TTCACTGGATACCTCCGTCTCATCCTTGACGGCCATGTCCGCATTGGCGA
TGCCGAAGAGGAGAAGGATGCATGGGATGAAACTATCCGGCTAAGAGAGA
GAATGTTCTGGTCACGCATCGGAGGTGGAATTATCCCTTTGTTTGCTCAC
GCCAATGGCTTCCAAGGCAATATCCCTACATCTACTGAAAATGTTGAGGC
TCCGGTTGCCGATGGTCGTGATGATTGCCAGCGGTCAATCATCTCCACCG
TCCCCGAGGATATCACCATAGAAACAAAGAACCTAGACGAGATTGACGAG
CACAACCATGACGAGGGTTCCGTGGCTGACGATCCGTTTGTGTCTGCTCC
CTCCGAGTCAGAATCTACAGCCAGCAGCGCGGCGGTCTCTCCCACGGATG
CTAGCGCACCCGTCGTGAAGACAGACCTCGTTGATGACATGCACGAACAG
CCTGATGTGCAGGTTGTCGTTCCTGAACCTACACATGATGAAGCTGATAG
CGTTAAGCTCCCAACTCAAGTTGAGGAGACGCCAATCAACCACGACACCA
CAAAACATGGTGATAACTGAATGGCCGATTTTATTGCTTTCCATACTTAT
TACTCTCGCCACAACTTCCTATCCCCGTCTACGATGCTGCCACGCCCCAC
CAGCCACAAACGGTCGAATTCCTCCGAGAACAATTCTCTCTCCCCCGACA
AGACCGTCACGAAAGCCAGATCCACCAATGATTTGTCTGGAACTGCCACT
GCGAAACCGACACCGGGCGTCCGCTCGTCCAGTGTCGGCAATTTCCAGGA
AACCAGCTTTAGCACTCTGAAAGACCCCAGACTTGCGAGCCACTCGGAAG
ACTCGGAGACGCCAGAGTCAACTCAGTCGCATCATCCAGACCTGAGCAAT
GAGGTTGCAGCGTTGAGCGTCAAGTTGGTCCAGGCGATCAACAATCAGAC
AACGCTCGATGACAACCTAGTTGCCACTCGTCAGGAATTGGAGCAGGCAC
AAGCCAAGATCCGAGTCCTTGAGTTGGAAAACGAAAAGTACCAGCGAGAC
ATTGATCAGGAAGTCTTGATCAAGAAGTCCGACGTGGACTACGAGATGTT
GCGCTTACAAGCTGCCTTGGCTGAAGAGAAGGCTCAGCGCGCCCTTGTGG
AAAAGGAGAAGAAGGGCATTGAACAAGAATTAGAAACACTAACTGCCGCG
CTTTTTGAAGAGGCCAACAAGATGGTCGCAGCGGCCAAGCTTGAGCGTGA
GGCCGTAGAAAAGAAAAACGAGCAGCTGCGCTCGCAAGTCAAAGATACCG
AAGCACTGCTTGCATCGCATCAAGAACAATTGGCCGAGTTAAAGTCCGTC
TTGCAGGGACTCAACATCGCCAAGGAGGATAGTGAGACTCGCACAATCAT
CTCGACAGCTCCGTCATCACCAACTATGCCGCGGCATCCTTTGCACATCA
GCAAGAATTCTGATATCCCCGACATACCAGAGGAGATCCCAACTCTAGAA
GAGCTCACTCCAGGACCGTCCACCAGTTTCCCCCATCTGATCAAGCCGGT
CTGTCGAACCGATATTCAAGCTTACGAGGATTTTCGGGAACTCTTCACTA
CATCTCGAGCTTCCAAGCCTGCCAGTCGGGCCACAAGTGGGTCTTACACT
GGCTTGAACGTCATGAGCTTGGCTAGTGGGTTCGGTTCAGCGTCGTCATC
TCCCGCCAAATCTCAAACACATTCTCCTAATGGAAGCGTGTCTTCCCCAC
AGCCCGTGACTTCCCATATTCCTCTCAAGGAGACCCGCTTCTACAAGCGC
GTGCTTTCGGAAGACATCGAACCGACCCTCCGGCTTGATGCTGCGCCCGG
GATCTCATGGCTAACGCGGCGCTCAGTATTGAGCGGGATCTGCGATGGAA
CTCTCCTGGTCGAGCCCATGCCGCCTTCAGCAAAGAAATATGAGTTTCCT
TGTTCAATGTGTGGCGAGCGCCGAAACGGTCCCACCAACGAGAGGACCCA
TCGGTTCCGGACGTCCGATAGCGAGACCGCCCAGCGATATCCGCTGTGTG
TACTGTGTTTAGAGAGAGTCCGTTCCAGCTGCGAGTTCACTGGATACCTC
CGTCTCATCCTTGACGGCCATGTCCGCATTGGCGATGCCGAAGAGGAGAA
GGATGCATGGGATGAAACTATCCGGCTAAGAGAGAGAATGTTCTGGTCAC
GCATCGGAGGTGGAATTATCCCTTTGTTTGCTCACGCCAATGGCTTCCAA
GGCAATATCCCTACATCTACTGAAAATGTTGAGGCTCCGGTTGCCGATGG
TCGTGATGATTGCCAGCGGTCAATCATCTCCACCGTCCCCGAGGATATCA
CCATAGAAACAAAGAACCTAGACGAGATTGACGAGCACAACCATGACGAG
GGTTCCGTGGCTGACGATCCGTTTGTGTCTGCTCCCTCCGAGTCAGAATC
TACAGCCAGCAGCGCGGCGGTCTCTCCCACGGATGCTAGCGCACCCGTCG
TGAAGACAGACCTCGTTGATGACATGCACGAACAGCCTGATGTGCAGGTT
GTCGTTCCTGAACCTACACATGATGAAGCTGATAGCGTTAAGCTCCCAAC
TCAAGTTGAGGAGACGCCAATCAACCACGACACCACAAAACATGGTGATA
ACTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002054-T1.utr5p1 | KJC3_002054-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002054-T1.utr3p1 | KJC3_002054-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR009449 |
| DBxref | PFAM:PF06428 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:1543363..1546884 + |
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