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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:1562444..1566144- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_002060-T1 ID=KJC3_002060-T1|Name=KJC3_002060-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3701bp|location=Sequence derived from alignment at ch2:1562444..1566144- (Aspergillus niger KJC3)
CAGCCTCGCCCTCCAGAAAGAGTCCCTTTTCTTTCAATCGGGCAACCACA
CCCAGCTCCGTAGATTCACTGGGTGAGGGGCTCTCTGCCGTTATCCTGAT
TATTCTCCGAAGAGTGAGACTGCAGGTCCGGCGCTCATCATGCCACCTAC
TGTAAGCTTCTCGCCGCGAGCGACGACCCCGACCCCGTTATCGATCAACT
CACCATTGTACCGAAACTTGCCCATGCGGTATAGAACGATGTCATCGCTG
ATATGTACTGACAATCCTCCAGTTTAGATCCTCTCGCTCTGGTCGCCAAT
TCGGCGATGGCGCCAACCGTAACAGAAGTCAGATCGATCACGATGTTTTC
GAGGGGCTCCCTGTACGACGCTGGACACGTCAAACCCAGACCGTCTCGCA
AGTTCCCAAGGCCGAAGGTACAGAAGCTGTCGTGCAGGGTCCGGGGGGGA
AGTCAACCATCCCAGAACACCCAATGCCCCGAGACAGTCACCTGTTGAGT
CCCATGAGCAGAGCCCTCCTGCGAGCTGCGCGAGCCGGATGCATCTACAT
CCGCCAAGCGTCAAAAGACTCCGAAGACGAAGAGAAAGAAGCGACTGATG
GAGAGGAACAGCCACTTATCCAGAGCACCGAACGCAGTTTCGTCACGCGC
AAGTGGTCCGCAGTACCGAGACACCTAGAATCATCAGAAGTTGAATTCCT
CGCCAAACGACGACCGGGTTTACCATCTCTATACGGTGCTGCTGCTGGGT
CTACGGATGGAAATAATGCTCCTGCGCCGATGAGGAGGACCAAGTTCAAG
AAGGTCGATCCGGCGACCGGAAATATCTCGATTTATGAAGCATGGGTACC
CGAGGGACACAAGATTGAAGGGGAGATCACTGATGGGTCTCAAGTTTCAG
CTGAAAACAGCGCGGTCACTGTGACTCCTGAGGCGCCAGCGCCCGGTACG
GTCATTGAGGGAGTTGGGGTTGTCAACGCCGAGGGTGTGGTAGTCGCAGA
TACAAACTCCGCAGCTGTCATGACTCCTCCAAAAAGACGGCCTCCTCCCC
CAAAGCGCAAGGCGAAGGGCTTTGGAAAGGGACGGAGAAAGAAGGTCATG
TTTGCTCCTGGCGATGGCGCGGATGCCGCCACGGTCCATGGTTCCAATGG
CTCCGGAGTGGATGGCGCTGCAGAATATGCCAAGGACGGGGATGCGTCCC
GCATGTCTGGTGACCAGAATGGACAAGAAGAGGACGATGAGGAGGGCGAG
GAGGGCGAGGAGGGCGATGAGAGCGACGAGGGTGATGAGTCTATGCTAGA
GGCAAAGACTCCGGAAACTCCAGTTCAGCGTCCCAGCACTGAGCCGCCGA
CCGACTCGACGCCTGTGCCCACACCGGCCCCGGCAACTGAACCAGCTGCC
AAAGCTGATTCCACAGAGGCGGCGTTGCCAACCCCTGAGCTTCCTTCAGC
TGCTCCAGAACCGGCTCCAGCACCGGCTCCAGAAACAGTTGCAGAGCCAG
CTGCCCCACCCCCTCAGCCAGATCAACCATCAGTCGCTGCTGAACCTCCT
TCACAAGCTGCTGCTATCCAGCCCACACCAGAGGCTCCCGGGCAGACGAG
TGAGGCATCAGGACAGAAAGAAGATGTGGAGATGACCGAAGCTTACCCCT
CAATACCTGGTCCTGAGGAAAGTGTATCTGCAACCCCTCAGTCATTTCCA
GCTACTCAGCAACAGGAGCCTGCTTCTGGCGCTGAAGATGTTACGACCTT
GCCATCCCAGGAAGCCCCCCAACCTCCCGTTGCGGAAGCATCGTCAGTCG
TGCCAACCTCAGAGCAGCCTGTCGATAAAGAGCCAGTAGATGAGCCAGTG
CAGCCAGATAAGACAAGTACTGATACTGCTCAGCCGCCGGCACAAGATGA
CCAGATTATGGATACGACCATGGAGGATGTTGAACCTCTCCAACAAACCG
CACAGGATCAAGCGGCGGTTCCCCCGCCGGCGGAACAACCGATTCCCGAG
CAAGCAGCTCAGACTAGTAATGTTGTTGCAGAGAACAAGGAAGTTGACCT
CTTGGGTACTTTGGAGGCGAGTCTGAGCCAGCCGCCGGGCGAGGAACAGG
GTGACAACCGAGGGACAGACATTGAGATGGAAATGGATGCACCTTCCCAC
ATTGAGCAGCTTGCTGCTACGGAAACAGCTGAGCCTCTTGCGGATAAGCC
AGGGGAGCTTGAGACGCAAGCAGCAGAGGATACTACCGTGGCTGCAGAGA
CTGCCGTTGAACCAGCTGCAGTGCCCGCTGAACCACTCGACGAACAGCAT
ACCGAAAAACCGTCCGAGACACCTGCACCGCAGCCTATCGAACAACTCCC
CGAAGCTCCAGCAGAGCAAGTGGAAGAGCCGGCAGGCGAGCCGGTCATGG
AACGGCCAGTGAAGTCGGAATCACCTGCTCAGCCAGAGCAACATACGCAA
TTAGAGCCACCTGTTCGGCCAGAACAGCCTATGCAGGAAGAGCCTGTACA
GGCAGTTGAACCTGTGCAGTCAGAGCAGCCAGAGCAACCTAAGCCACCTG
TTCAGCCGGAACAGCCTGTGCAGGCGGAGCCTGTAGAGCCAGCGGAGTCT
GCGCAGCCAGAGCAACCGGAGCAACCAGAAGGGACTCAGCAATACGAGCA
GCCTGCGCAACCATTGCAGCAAGAGCAACCCCAAGAGCATGCCCCATCAC
AAGCTTCTGAGGAAGTTCCAGCCCAGTCTGCAGAGCCGACACCCCAGACT
GCAACCGAGCAGCAGCCCGAGCAGACCGAACAGACACAGACCGAGCAGGC
GCCTGCTGAGCTACCGTCAGAGCCACAAGCAGATGAACCACCAAAAGCAC
TAGAGGAGCATGTTCCCGTTAACGCAGAGGAACCAGCCGCTCCCAAGGTA
GAAGAACAAGGAACACCCCTCGTCCCACCTCAACAACCAGAGGAACCCCA
GCCACCCAAAGAACCTACGCCGCCCGCATTACCTGCTACAGAGGCACCAC
AGCAACAGCCAGAGCCAGTACCGGCGCCACAGCCCCCAGCTGAAGAACCT
CAAGCTGAAGAAAAACCAACCCAAGAAGGTCCAGCTGAGGCTGAATCCAA
GGAGCCGGAACCTATCTCTGAAGCCGAACCCACCCCAGCCGAAGCCCCCT
CTGCACCTCCCATCCCTGCGCCTGAGCCTGAGCCCGAGCCCACCCCCGAG
CAACCAGCCCAGGAGACGACCAAACCCGAGGAGGCAGAGCAGCAAGAGCA
ACAACCACCAGCTGATACCAAGACGGCATGAGAGGTCTCAGGCCCATATC
CAATAAAATATACAGGCGGACACGCTTAGAAGACATACTCGTCTTTTCTT
TCCTTTTCTTCTATTTTCTTAGAACTAGGAATTTTTCTTTAAACCTACAG
TTCAGGCGCAAGCTAGGAAACGGTGCTATTGGCGTGCAATCACGGGGACC
TGGAATGAATTTTTTATTTATTTATTTATCATCACTGTGAAACTTAACAT
ACACGGTATATGTATGGCCTGGCCATTGGGCCTACTATTTTTATATTTCT
TTTTTCTCTGTTATTGTATCATAGGAGTATATCTTTTTTTCCCCTTCTTC
TCTTTTCTTAGAGGAACTTTTACTTTCACGTCTCTTGTTCGGTGTAGCGT
ATTACAGTACACATGGCATATAGTCTCTGAAAGTAGTTGCGTATGACAGG
C back to topCoding sequence (CDS) from alignment at ch2:1562444..1566144- >KJC3_002060-T1 ID=KJC3_002060-T1|Name=KJC3_002060-T1|organism=Aspergillus niger KJC3|type=CDS|length=6042bp|location=Sequence derived from alignment at ch2:1562444..1566144- (Aspergillus niger KJC3)
TTTAGATCCTCTCGCTCTGGTCGCCAATTCGGCGATGGCGCCAACCGTAA
CAGAAGTCAGATCGATCACGATGTTTTCGAGGGGCTCCCTGTACGACGCT
GGACACGTCAAACCCAGACCGTCTCGCAAGTTCCCAAGGCCGAAGGTACA
GAAGCTGTCGTGCAGGGTCCGGGGGGGAAGTCAACCATCCCAGAACACCC
AATGCCCCGAGACAGTCACCTGTTGAGTCCCATGAGCAGAGCCCTCCTGC
GAGCTGCGCGAGCCGGATGCATCTACATCCGCCAAGCGTCAAAAGACTCC
GAAGACGAAGAGAAAGAAGCGACTGATGGAGAGGAACAGCCACTTATCCA
GAGCACCGAACGCAGTTTCGTCACGCGCAAGTGGTCCGCAGTACCGAGAC
ACCTAGAATCATCAGAAGTTGAATTCCTCGCCAAACGACGACCGGGTTTA
CCATCTCTATACGGTGCTGCTGCTGGGTCTACGGATGGAAATAATGCTCC
TGCGCCGATGAGGAGGACCAAGTTCAAGAAGGTCGATCCGGCGACCGGAA
ATATCTCGATTTATGAAGCATGGGTACCCGAGGGACACAAGATTGAAGGG
GAGATCACTGATGGGTCTCAAGTTTCAGCTGAAAACAGCGCGGTCACTGT
GACTCCTGAGGCGCCAGCGCCCGGTACGGTCATTGAGGGAGTTGGGGTTG
TCAACGCCGAGGGTGTGGTAGTCGCAGATACAAACTCCGCAGCTGTCATG
ACTCCTCCAAAAAGACGGCCTCCTCCCCCAAAGCGCAAGGCGAAGGGCTT
TGGAAAGGGACGGAGAAAGAAGGTCATGTTTGCTCCTGGCGATGGCGCGG
ATGCCGCCACGGTCCATGGTTCCAATGGCTCCGGAGTGGATGGCGCTGCA
GAATATGCCAAGGACGGGGATGCGTCCCGCATGTCTGGTGACCAGAATGG
ACAAGAAGAGGACGATGAGGAGGGCGAGGAGGGCGAGGAGGGCGATGAGA
GCGACGAGGGTGATGAGTCTATGCTAGAGGCAAAGACTCCGGAAACTCCA
GTTCAGCGTCCCAGCACTGAGCCGCCGACCGACTCGACGCCTGTGCCCAC
ACCGGCCCCGGCAACTGAACCAGCTGCCAAAGCTGATTCCACAGAGGCGG
CGTTGCCAACCCCTGAGCTTCCTTCAGCTGCTCCAGAACCGGCTCCAGCA
CCGGCTCCAGAAACAGTTGCAGAGCCAGCTGCCCCACCCCCTCAGCCAGA
TCAACCATCAGTCGCTGCTGAACCTCCTTCACAAGCTGCTGCTATCCAGC
CCACACCAGAGGCTCCCGGGCAGACGAGTGAGGCATCAGGACAGAAAGAA
GATGTGGAGATGACCGAAGCTTACCCCTCAATACCTGGTCCTGAGGAAAG
TGTATCTGCAACCCCTCAGTCATTTCCAGCTACTCAGCAACAGGAGCCTG
CTTCTGGCGCTGAAGATGTTACGACCTTGCCATCCCAGGAAGCCCCCCAA
CCTCCCGTTGCGGAAGCATCGTCAGTCGTGCCAACCTCAGAGCAGCCTGT
CGATAAAGAGCCAGTAGATGAGCCAGTGCAGCCAGATAAGACAAGTACTG
ATACTGCTCAGCCGCCGGCACAAGATGACCAGATTATGGATACGACCATG
GAGGATGTTGAACCTCTCCAACAAACCGCACAGGATCAAGCGGCGGTTCC
CCCGCCGGCGGAACAACCGATTCCCGAGCAAGCAGCTCAGACTAGTAATG
TTGTTGCAGAGAACAAGGAAGTTGACCTCTTGGGTACTTTGGAGGCGAGT
CTGAGCCAGCCGCCGGGCGAGGAACAGGGTGACAACCGAGGGACAGACAT
TGAGATGGAAATGGATGCACCTTCCCACATTGAGCAGCTTGCTGCTACGG
AAACAGCTGAGCCTCTTGCGGATAAGCCAGGGGAGCTTGAGACGCAAGCA
GCAGAGGATACTACCGTGGCTGCAGAGACTGCCGTTGAACCAGCTGCAGT
GCCCGCTGAACCACTCGACGAACAGCATACCGAAAAACCGTCCGAGACAC
CTGCACCGCAGCCTATCGAACAACTCCCCGAAGCTCCAGCAGAGCAAGTG
GAAGAGCCGGCAGGCGAGCCGGTCATGGAACGGCCAGTGAAGTCGGAATC
ACCTGCTCAGCCAGAGCAACATACGCAATTAGAGCCACCTGTTCGGCCAG
AACAGCCTATGCAGGAAGAGCCTGTACAGGCAGTTGAACCTGTGCAGTCA
GAGCAGCCAGAGCAACCTAAGCCACCTGTTCAGCCGGAACAGCCTGTGCA
GGCGGAGCCTGTAGAGCCAGCGGAGTCTGCGCAGCCAGAGCAACCGGAGC
AACCAGAAGGGACTCAGCAATACGAGCAGCCTGCGCAACCATTGCAGCAA
GAGCAACCCCAAGAGCATGCCCCATCACAAGCTTCTGAGGAAGTTCCAGC
CCAGTCTGCAGAGCCGACACCCCAGACTGCAACCGAGCAGCAGCCCGAGC
AGACCGAACAGACACAGACCGAGCAGGCGCCTGCTGAGCTACCGTCAGAG
CCACAAGCAGATGAACCACCAAAAGCACTAGAGGAGCATGTTCCCGTTAA
CGCAGAGGAACCAGCCGCTCCCAAGGTAGAAGAACAAGGAACACCCCTCG
TCCCACCTCAACAACCAGAGGAACCCCAGCCACCCAAAGAACCTACGCCG
CCCGCATTACCTGCTACAGAGGCACCACAGCAACAGCCAGAGCCAGTACC
GGCGCCACAGCCCCCAGCTGAAGAACCTCAAGCTGAAGAAAAACCAACCC
AAGAAGGTCCAGCTGAGGCTGAATCCAAGGAGCCGGAACCTATCTCTGAA
GCCGAACCCACCCCAGCCGAAGCCCCCTCTGCACCTCCCATCCCTGCGCC
TGAGCCTGAGCCCGAGCCCACCCCCGAGCAACCAGCCCAGGAGACGACCA
AACCCGAGGAGGCAGAGCAGCAAGAGCAACAACCACCAGCTGATACCAAG
ACGGCATGAATGCCACCTACTTTTAGATCCTCTCGCTCTGGTCGCCAATT
CGGCGATGGCGCCAACCGTAACAGAAGTCAGATCGATCACGATGTTTTCG
AGGGGCTCCCTGTACGACGCTGGACACGTCAAACCCAGACCGTCTCGCAA
GTTCCCAAGGCCGAAGGTACAGAAGCTGTCGTGCAGGGTCCGGGGGGGAA
GTCAACCATCCCAGAACACCCAATGCCCCGAGACAGTCACCTGTTGAGTC
CCATGAGCAGAGCCCTCCTGCGAGCTGCGCGAGCCGGATGCATCTACATC
CGCCAAGCGTCAAAAGACTCCGAAGACGAAGAGAAAGAAGCGACTGATGG
AGAGGAACAGCCACTTATCCAGAGCACCGAACGCAGTTTCGTCACGCGCA
AGTGGTCCGCAGTACCGAGACACCTAGAATCATCAGAAGTTGAATTCCTC
GCCAAACGACGACCGGGTTTACCATCTCTATACGGTGCTGCTGCTGGGTC
TACGGATGGAAATAATGCTCCTGCGCCGATGAGGAGGACCAAGTTCAAGA
AGGTCGATCCGGCGACCGGAAATATCTCGATTTATGAAGCATGGGTACCC
GAGGGACACAAGATTGAAGGGGAGATCACTGATGGGTCTCAAGTTTCAGC
TGAAAACAGCGCGGTCACTGTGACTCCTGAGGCGCCAGCGCCCGGTACGG
TCATTGAGGGAGTTGGGGTTGTCAACGCCGAGGGTGTGGTAGTCGCAGAT
ACAAACTCCGCAGCTGTCATGACTCCTCCAAAAAGACGGCCTCCTCCCCC
AAAGCGCAAGGCGAAGGGCTTTGGAAAGGGACGGAGAAAGAAGGTCATGT
TTGCTCCTGGCGATGGCGCGGATGCCGCCACGGTCCATGGTTCCAATGGC
TCCGGAGTGGATGGCGCTGCAGAATATGCCAAGGACGGGGATGCGTCCCG
CATGTCTGGTGACCAGAATGGACAAGAAGAGGACGATGAGGAGGGCGAGG
AGGGCGAGGAGGGCGATGAGAGCGACGAGGGTGATGAGTCTATGCTAGAG
GCAAAGACTCCGGAAACTCCAGTTCAGCGTCCCAGCACTGAGCCGCCGAC
CGACTCGACGCCTGTGCCCACACCGGCCCCGGCAACTGAACCAGCTGCCA
AAGCTGATTCCACAGAGGCGGCGTTGCCAACCCCTGAGCTTCCTTCAGCT
GCTCCAGAACCGGCTCCAGCACCGGCTCCAGAAACAGTTGCAGAGCCAGC
TGCCCCACCCCCTCAGCCAGATCAACCATCAGTCGCTGCTGAACCTCCTT
CACAAGCTGCTGCTATCCAGCCCACACCAGAGGCTCCCGGGCAGACGAGT
GAGGCATCAGGACAGAAAGAAGATGTGGAGATGACCGAAGCTTACCCCTC
AATACCTGGTCCTGAGGAAAGTGTATCTGCAACCCCTCAGTCATTTCCAG
CTACTCAGCAACAGGAGCCTGCTTCTGGCGCTGAAGATGTTACGACCTTG
CCATCCCAGGAAGCCCCCCAACCTCCCGTTGCGGAAGCATCGTCAGTCGT
GCCAACCTCAGAGCAGCCTGTCGATAAAGAGCCAGTAGATGAGCCAGTGC
AGCCAGATAAGACAAGTACTGATACTGCTCAGCCGCCGGCACAAGATGAC
CAGATTATGGATACGACCATGGAGGATGTTGAACCTCTCCAACAAACCGC
ACAGGATCAAGCGGCGGTTCCCCCGCCGGCGGAACAACCGATTCCCGAGC
AAGCAGCTCAGACTAGTAATGTTGTTGCAGAGAACAAGGAAGTTGACCTC
TTGGGTACTTTGGAGGCGAGTCTGAGCCAGCCGCCGGGCGAGGAACAGGG
TGACAACCGAGGGACAGACATTGAGATGGAAATGGATGCACCTTCCCACA
TTGAGCAGCTTGCTGCTACGGAAACAGCTGAGCCTCTTGCGGATAAGCCA
GGGGAGCTTGAGACGCAAGCAGCAGAGGATACTACCGTGGCTGCAGAGAC
TGCCGTTGAACCAGCTGCAGTGCCCGCTGAACCACTCGACGAACAGCATA
CCGAAAAACCGTCCGAGACACCTGCACCGCAGCCTATCGAACAACTCCCC
GAAGCTCCAGCAGAGCAAGTGGAAGAGCCGGCAGGCGAGCCGGTCATGGA
ACGGCCAGTGAAGTCGGAATCACCTGCTCAGCCAGAGCAACATACGCAAT
TAGAGCCACCTGTTCGGCCAGAACAGCCTATGCAGGAAGAGCCTGTACAG
GCAGTTGAACCTGTGCAGTCAGAGCAGCCAGAGCAACCTAAGCCACCTGT
TCAGCCGGAACAGCCTGTGCAGGCGGAGCCTGTAGAGCCAGCGGAGTCTG
CGCAGCCAGAGCAACCGGAGCAACCAGAAGGGACTCAGCAATACGAGCAG
CCTGCGCAACCATTGCAGCAAGAGCAACCCCAAGAGCATGCCCCATCACA
AGCTTCTGAGGAAGTTCCAGCCCAGTCTGCAGAGCCGACACCCCAGACTG
CAACCGAGCAGCAGCCCGAGCAGACCGAACAGACACAGACCGAGCAGGCG
CCTGCTGAGCTACCGTCAGAGCCACAAGCAGATGAACCACCAAAAGCACT
AGAGGAGCATGTTCCCGTTAACGCAGAGGAACCAGCCGCTCCCAAGGTAG
AAGAACAAGGAACACCCCTCGTCCCACCTCAACAACCAGAGGAACCCCAG
CCACCCAAAGAACCTACGCCGCCCGCATTACCTGCTACAGAGGCACCACA
GCAACAGCCAGAGCCAGTACCGGCGCCACAGCCCCCAGCTGAAGAACCTC
AAGCTGAAGAAAAACCAACCCAAGAAGGTCCAGCTGAGGCTGAATCCAAG
GAGCCGGAACCTATCTCTGAAGCCGAACCCACCCCAGCCGAAGCCCCCTC
TGCACCTCCCATCCCTGCGCCTGAGCCTGAGCCCGAGCCCACCCCCGAGC
AACCAGCCCAGGAGACGACCAAACCCGAGGAGGCAGAGCAGCAAGAGCAA
CAACCACCAGCTGATACCAAGACGGCATGAATGCCACCTACT back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002060-T1.utr3p1 | KJC3_002060-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002060-T1.utr5p1 | KJC3_002060-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:1562444..1566144 - |
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