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KJC3_002061-T1, KJC3_002061-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_002061-T1
Unique NameKJC3_002061-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:1566334..1567369-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_002061-T1 ID=KJC3_002061-T1|Name=KJC3_002061-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1036bp|location=Sequence derived from alignment at ch2:1566334..1567369- (Aspergillus niger KJC3)
ATAGCATCGCCTAGCTGGACCCCCGCGTTAGCGGCCGAGAACCGATTAGA
AATCCAGAATCCCTGTATCTGGAGTCCCTTTCAGCATCATCATCAACGAC
ATCATCTTCAGCCCGTCTTAATTTCCCATTTATACAAAGTTTATAATCGC
ATCTCTCCACTCATATTTGCCCATTATGTCTGTGCCGACCATGCAGCGTG
AAACGGCCTTCCAGGTCCGGTCTCTGGTATGCCCACCCTGCTGAAACTAG
ATTGCGCGAAATCCCTCCTACCCTTGTATCGCAGTGGCATTGGGGCTAAC
CAGTCTATCTCATGCGGACAGTTCCGCTCTTTGCTCCGTCAATCCTCCCA
GTTCTCGAACTACAACTTCCGCGAGTATGCCCGCCGGCGCACGTTGGATG
CCTTCCGCGAGCACCAGAAGGAGTCCGAGGACCGACGGATACAGGAGTTG
ATCCAGGATGGACTACAGAACTTGCGGATGATGAAGGTCAGTATATATTC
TCGGATAGACATGATTAGATGTGCCCGCGTTTGCCTCTACTACGCAGGCC
GTGGGCTCTGAGTCAAAGCGGGGGTTGACGCTAGTAAACGAGCTGCTAAT
ACTTTTGCAGAGGCAAACCGTTATCAGTCAGTTCTACCAGCTAGATCGTT
TGGTTGTTGAGGGTCAGAAGACTGTGAGTATCCGGGGAACCTGTCTATGA
TTGCCATGAAACTAAAATCTATCGATAGGGTAAGCAGACTGGCACGGAAG
GGAACATTGTTCGCCAGAAGGATACTGGGTAAGATGCATCCTTCGTTATT
CAAACCTTTTGGGCCATGCTGACGTGTAAATAGTTGGGACTAAACGCCCA
ACGGGGGTCATTTGTTTTTCGCAGCGAGAGTACGGAGTTGAGGGGAATCC
AGCACCAAGACGATATCAATATCATTTGGGGCCATTTGAGCCGATGGCCC
GAAGATGAAGGAATAGCATAGATCGAAGGGGTTCTGTATTTTTATTGAAA
GCCACTGCGCTTTAGGTAGCGATTCTTACTCTGACT
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Coding sequence (CDS) from alignment at ch2:1566334..1567369-

>KJC3_002061-T1 ID=KJC3_002061-T1|Name=KJC3_002061-T1|organism=Aspergillus niger KJC3|type=CDS|length=1332bp|location=Sequence derived from alignment at ch2:1566334..1567369- (Aspergillus niger KJC3)
GGTAAGCAGACTGGCACGGAAGGGAACATTGTTCGCCAGAAGGATACTGG
GTAAAGGCAAACCGTTATCAGTCAGTTCTACCAGCTAGATCGTTTGGTTG
TTGAGGGTCAGAAGACTTTCCGCTCTTTGCTCCGTCAATCCTCCCAGTTC
TCGAACTACAACTTCCGCGAGTATGCCCGCCGGCGCACGTTGGATGCCTT
CCGCGAGCACCAGAAGGAGTCCGAGGACCGACGGATACAGGAGTTGATCC
AGGATGGACTACAGAACTTGCGGATGATGAAGATGTCTGTGCCGACCATG
CAGCGTGAAACGGCCTTCCAGGTCCGGTCTCTGGGTAAGCAGACTGGCAC
GGAAGGGAACATTGTTCGCCAGAAGGATACTGGGTAAAGGCAAACCGTTA
TCAGTCAGTTCTACCAGCTAGATCGTTTGGTTGTTGAGGGTCAGAAGACT
TTCCGCTCTTTGCTCCGTCAATCCTCCCAGTTCTCGAACTACAACTTCCG
CGAGTATGCCCGCCGGCGCACGTTGGATGCCTTCCGCGAGCACCAGAAGG
AGTCCGAGGACCGACGGATACAGGAGTTGATCCAGGATGGACTACAGAAC
TTGCGGATGATGAAGATGTCTGTGCCGACCATGCAGCGTGAAACGGCCTT
CCAGGTCCGGTCTCTGGGTAAGCAGACTGGCACGGAAGGGAACATTGTTC
GCCAGAAGGATACTGGGTAAAGGCAAACCGTTATCAGTCAGTTCTACCAG
CTAGATCGTTTGGTTGTTGAGGGTCAGAAGACTTTCCGCTCTTTGCTCCG
TCAATCCTCCCAGTTCTCGAACTACAACTTCCGCGAGTATGCCCGCCGGC
GCACGTTGGATGCCTTCCGCGAGCACCAGAAGGAGTCCGAGGACCGACGG
ATACAGGAGTTGATCCAGGATGGACTACAGAACTTGCGGATGATGAAGAT
GTCTGTGCCGACCATGCAGCGTGAAACGGCCTTCCAGGTCCGGTCTCTGG
GTAAGCAGACTGGCACGGAAGGGAACATTGTTCGCCAGAAGGATACTGGG
TAAAGGCAAACCGTTATCAGTCAGTTCTACCAGCTAGATCGTTTGGTTGT
TGAGGGTCAGAAGACTTTCCGCTCTTTGCTCCGTCAATCCTCCCAGTTCT
CGAACTACAACTTCCGCGAGTATGCCCGCCGGCGCACGTTGGATGCCTTC
CGCGAGCACCAGAAGGAGTCCGAGGACCGACGGATACAGGAGTTGATCCA
GGATGGACTACAGAACTTGCGGATGATGAAGATGTCTGTGCCGACCATGC
AGCGTGAAACGGCCTTCCAGGTCCGGTCTCTG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_002061KJC3_002061Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002061-T1KJC3_002061-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002061-T1.cdsKJC3_002061-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002061-T1.utr3p1KJC3_002061-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002061-T1.exon4KJC3_002061-T1.exon4Aspergillus niger KJC3exon
KJC3_002061-T1.exon3KJC3_002061-T1.exon3Aspergillus niger KJC3exon
KJC3_002061-T1.exon2KJC3_002061-T1.exon2Aspergillus niger KJC3exon
KJC3_002061-T1.exon1KJC3_002061-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002061-T1.utr5p1KJC3_002061-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR008011
DBxrefPFAM:PF05347
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:1566334..1567369 -
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