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KJC3_002081-T1, KJC3_002081-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_002081-T1
Unique NameKJC3_002081-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:1616898..1618068-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_002081-T1 ID=KJC3_002081-T1|Name=KJC3_002081-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1171bp|location=Sequence derived from alignment at ch2:1616898..1618068- (Aspergillus niger KJC3)
ATGGAGTCAAAGGTGGAGAACGTCGAATCGCATAAGACGGTAGACGGTAG
ATTAATTGGACGGAAAAGCCGTTCGTGCATCCTGGCCTTGCGCTATCAGG
AGCATTGGAACCGAGTCGCAAGTCGTCCGGTGTCTGAATGGCAGGCACAT
GTCACCGGACCGGAAAACGTATGTCATGGCCGTATCTAAGCAGCGTATAT
TGGATTAGCGATAGAAAATGTATTTGTATGAGATTAGCAGTCTGCCGAGT
GGCGACAATGCGTCAACCACCGTAATCGATCTGCCCGTCCGAGTAACAGG
TAAATAGATAGTAGTACAAAGTAAGAAAGGGAGCTCCATCGAAGGACCTT
GGAGCATCTAGCAGCATCTGGCGGCTGATATAAGCAGCCCGTGATTGGTG
GAGAAGGCATCAGCCACAGGGGCCACTGCCGGGCGGTGGCAAAAGTGCTT
GTTCGGGCAGTATTAGCGAGAGGGTTGCAACCCTATGCGCCCCCAAACGG
GCCGCCGTGGGTGACGGCGTCGAGAATTCCCTTCAGCGCTCGCCATCTCC
ACGAGACCACCTTTTTGCTTTCACCCTCAAGCAGGCCATCTCCATCAGCG
CTACATTCAACTCCCTTCGCTGATCGACTTTTTGTCTCGTCAAGATGGTA
CGTTCTACCCCTTCGATGCCATCCCACAACCTGCCCGACATATCTCCCTG
CATGTTTGCATAGAAATGGCTGTCGCCGCTAGCCATCAGTGCACCCCGTC
GTCGCCACCATCCCGTCGCCGCAGGCATCTCGAAATTTTCATCGAAAGGA
AAGGAAGAATGTTGAACTGACGGATATCCCTTCGAAATAGGTTCTCGCGG
TCGACCTCCTCAACCCCGCGCCTCAGGCTGAGGCCCGCAAGCACAAGCTC
AAGGTATGAACAATCCGTATCGGGAAAAAAGTGATAGATAAGAAAGGGAA
GGGAATGGGTTGGCTGATATCGGTTATTACTTCGACAGACCCTTGTGCCT
GCTCCCCGCTCCTTCTTCATGGACGTCAAGTGCCCCGGCTGCTTCACCAT
CACCACCGTCTTCTCCCACGCCCAGACCGTCGTCGTCTGCGCTGGTTGCT
CGACCGTTCTGTGCCAGCCCACCGGTGGTAAGGCCCGTCTCACTGAGGGC
TGCTCTTTCCGCCGCAAGTAA
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Coding sequence (CDS) from alignment at ch2:1616898..1618068-

>KJC3_002081-T1 ID=KJC3_002081-T1|Name=KJC3_002081-T1|organism=Aspergillus niger KJC3|type=CDS|length=1242bp|location=Sequence derived from alignment at ch2:1616898..1618068- (Aspergillus niger KJC3)
ACCCTTGTGCCTGCTCCCCGCTCCTTCTTCATGGACGTCAAGTGCCCCGG
CTGCTTCACCATCACCACCGTCTTCTCCCACGCCCAGACCGTCGTCGTCT
GCGCTGGTTGCTCGACCGTTCTGTGCCAGCCCACCGGTGGTAAGGCCCGT
CTCACTGAGGGCTGCTCTTTCCGCCGCAAGTAAGTTCTCGCGGTCGACCT
CCTCAACCCCGCGCCTCAGGCTGAGGCCCGCAAGCACAAGCTCAAGATGG
AGTCAAAGGTGGAGAACGTCGAATCGCATAAGACGGTAGACGGTAGATTA
ATTGGACGGAAAAGCCGTTCGTGCATCCTGGCCTTGCGCTATCAGGAGCA
TTGGAACCGAGTCGCAAGTCGTCCGGTGTCTGAATGGCAGGCACATGTCA
CCGGACCGGAAAACACCCTTGTGCCTGCTCCCCGCTCCTTCTTCATGGAC
GTCAAGTGCCCCGGCTGCTTCACCATCACCACCGTCTTCTCCCACGCCCA
GACCGTCGTCGTCTGCGCTGGTTGCTCGACCGTTCTGTGCCAGCCCACCG
GTGGTAAGGCCCGTCTCACTGAGGGCTGCTCTTTCCGCCGCAAGTAAGTT
CTCGCGGTCGACCTCCTCAACCCCGCGCCTCAGGCTGAGGCCCGCAAGCA
CAAGCTCAAGATGGAGTCAAAGGTGGAGAACGTCGAATCGCATAAGACGG
TAGACGGTAGATTAATTGGACGGAAAAGCCGTTCGTGCATCCTGGCCTTG
CGCTATCAGGAGCATTGGAACCGAGTCGCAAGTCGTCCGGTGTCTGAATG
GCAGGCACATGTCACCGGACCGGAAAACACCCTTGTGCCTGCTCCCCGCT
CCTTCTTCATGGACGTCAAGTGCCCCGGCTGCTTCACCATCACCACCGTC
TTCTCCCACGCCCAGACCGTCGTCGTCTGCGCTGGTTGCTCGACCGTTCT
GTGCCAGCCCACCGGTGGTAAGGCCCGTCTCACTGAGGGCTGCTCTTTCC
GCCGCAAGTAAGTTCTCGCGGTCGACCTCCTCAACCCCGCGCCTCAGGCT
GAGGCCCGCAAGCACAAGCTCAAGATGGAGTCAAAGGTGGAGAACGTCGA
ATCGCATAAGACGGTAGACGGTAGATTAATTGGACGGAAAAGCCGTTCGT
GCATCCTGGCCTTGCGCTATCAGGAGCATTGGAACCGAGTCGCAAGTCGT
CCGGTGTCTGAATGGCAGGCACATGTCACCGGACCGGAAAAC
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_002081KJC3_002081Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002081-T1KJC3_002081-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002081-T1.cdsKJC3_002081-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002081-T1.exon3KJC3_002081-T1.exon3Aspergillus niger KJC3exon
KJC3_002081-T1.exon2KJC3_002081-T1.exon2Aspergillus niger KJC3exon
KJC3_002081-T1.exon1KJC3_002081-T1.exon1Aspergillus niger KJC3exon


Properties
Property NameValue
DBxrefInterPro:IPR011332
DBxrefInterPro:IPR000592
DBxrefPFAM:PF01667
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:1616898..1618068 -
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