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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:1628215..1631097+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_002087-T2 ID=KJC3_002087-T2|Name=KJC3_002087-T2|organism=Aspergillus niger KJC3|type=mRNA|length=2883bp|location=Sequence derived from alignment at ch2:1628215..1631097+ (Aspergillus niger KJC3)
CATGGAACCTGAATTGAACTTAGTATATATATATAGTACAGTAAGCATAC
TGTAGTAGTACTAGTAAGCCCGCGGCAATCATTGCGGAAGGTCATTGGAC
TGTCGTGCGTAGAAAAAGTCAAGTAGATAACTAGATCATAGATCCGACAG
TCACTTGAATAACTAACAGTCAATATCTGTTAGTAAACAAGCCTCAAGTC
CAGTGATGGTTGTATTATACTACTTAGAATGTGGTCTCGGTCGGGCCCGG
CGAGGAAGCTACAAAGGCGGGGAACTTCGAGACTTTGGCCCCAGGCTCCG
ATAGGCGCGGAAGCTCTCCATTCCTCGCTCACCTTCATCCTCTCCCATCT
CTTATCTCCATCGGTCTTCTAGCACGCAGTCGATCCTCGTTTACCTCTCT
GTTCTCGATATTTCTAGATACCCCAAATTGCGGCGAGGTTCAGTTCGTTC
ATAATGTCTGACGATGATGATTTCATGCAAGATTCGGGTGATGAGGAGTA
AGCCTGTGTTGTCCCTTCAACCTGCCGGTGTTCGCGGCCGCTAATCAGCT
GAACTATCACAGGTACGACTTCGAGTACGAAGATGCGGACGATGACGAAT
CGGGAGATGTCGGTATCGAGAACAAATACTATAATGCCAAACAGATGAAG
ATAGACAACCCGGAGGAGGCCATCGATGAATTCTTGGGAGTTCCGGATCT
AGAACAAGACAAGGGTGACTGGTAAGAGGCGTGGACGTCAGTGATGGTTC
AGACAAGGTGCTGACGGTAGCCAAGGGGGTTCAAAGGACTGAAGCAGGCT
ATCAAGTTGGAATTCAAGCTTGGGAGATATAGCGATGTAAGCGCCCCTTG
GCTCACTGATGATGTGATACTGACTCTTCAGGCCGTTGAACACTACAGAG
AGCTCCTCACTTACGTCAAGTCGGCCGTCACTCGTAATTACTCCGAAAAG
TCCATCAACAACATGCTAGATTATATCGAGAAGGGTTCGGATGATGACAC
AGCTTACCAGTGCATGGAGGAATTCTATTCTTTGACCCTGCGCTCATTCC
AAAATACCAACAACGAGCGACTATGGTTGAAGACAAACATCAAGTTGGCA
CGTCTTTGGCTGGAACGAAAAGAGTACGGCCAGCTGAGCAAGAAGGTGCG
GGAGTTGCATCGGGCATGCCAGCGAGAAGATGGAACCGACGATCCGAGTA
AAGGAACATATCTCCTCGAACTATACGCCCTTGAGATACAGATGTATGCC
GAGACGAAGAATAACAAACGACTAAAAGCGCTCTACCAGCGTGCCCTTCG
CGTTCGGTCGGCGGTGCCGCACCCCAAGATCATGGGAATCATCCGAGAAT
GCGGAGGGAAAATGCATATGAGCGAGGAAAACTGGGAGGAAGCGCAGAGC
GACTTCTTCGAGTCATTCCGGAACTACGATGAGGCGGGCTCAATACAGCG
AATCCAGGTGCTCAAGTATCTCGTGTTGACCACGATGCTGATGAAATCGG
ATATCAACCCATTTTATTCCCAAGAAACCAAGCCGTACAAGAACGACCCC
CGCATATCCGCTATGACCGATCTAGTCGATGCATTCCAACGCGACGACAT
CCACGCCTACGAAGCCATCCTTAGCAAAAACCCGGACGTCCTGGCCGATC
CCTTCATCGCCGAGAATATTGACGAGGTCAGCCGAAACATGCGGACGAAG
GCTGTTCTCAAACTGATCGCACCGTACACACGATTCACCCTTAAGTTCAT
CTCGAAACACATCCGGGTCTCGGTACCCGAGGTACAAGACATCCTGAGCT
TCCTGATCCTGGACAAGAAGCTCAATGCCAAGATCGACCAGGAAAACGGG
ATTGTGGAGGTTGAAAGCGCTAGCGACGTGGACCGGTTGCGGGCACTGCA
GGAGTGGAACGCATCATTGCGGTCTCTTTGGCAGGCGACCTTGAACGACG
GGGAGGGATTCAGGGAAGATCCCGCACAGCTGCACGGTATGAGAGGTGGA
GGGCCCATGTTCCAACCCGGGTTTGGAGATGAACCGCATGCAGGATTACG
CGCTGGTGGTCGCCGACTGCGGGGTGGACACAGAGGCAGAGGCGGCGGCG
GAGGGCCTGGAACGAAACTCGGCCTGGGAGGCGTCTAGAGAGGGAAATGC
ATTGTTCCATCCAGTCATCCCACCAAACCATCTCTGCGTCATAGCCCATA
CAAGATAGAGAAACACACCGGGTTACGAAGTAAGGATAAGGAATGAAATC
ATGACACACAACATCCATCCATCCATCCATCCATCAATCAATCAATCATC
ACACCCTACAGACCAAACCAAAACAATGATATCATAGCATACCAATGCGC
ACGGCATCTAGATAGCCCATCCATAAGCCACCAAGACACTAGAATCACCA
AAAGGACCAGGGGGTGTGGCAGCGGACCATGGAACATGAAACTTTTTCCA
CCTTCCTCCAACCAGACTACAGTAAGTATGTAGGAGTCAAAGCACCAAGC
CACAAATTTCTATTCGTTTTTTTGTGTTCACCAGGCACAAGCACAACAGC
AAGATGCAGAGAGGTACTTTTGTCAATCACTCACACACAGACTCACACGG
ATAACTAAATCATGCTCTTCCTCCTCCCTAAGCCGGCTGACATTTAGTCA
AGTGAAGTAAGTAACACCCGGAAACCGTCTGACCAAATCACATACATTAA
TACATACATAGTACAACCCATACTCACACAACATCCTAGACAATAATAAA
TCAAGTAAAACCCCTGTTATCCCGAGGCGCCACAACCCTTTCCCCCCCTC
TCCCAATCGGCGTCGTGACAGGTCAAGTCAGGTTCATATCCCGGCTCGGG
TTTTGGTCCAGAGAACGAGGGACCATGTGGGAG back to topCoding sequence (CDS) from alignment at ch2:1628215..1631097+ >KJC3_002087-T2 ID=KJC3_002087-T2|Name=KJC3_002087-T2|organism=Aspergillus niger KJC3|type=CDS|length=6084bp|location=Sequence derived from alignment at ch2:1628215..1631097+ (Aspergillus niger KJC3)
ATGTCTGACGATGATGATTTCATGCAAGATTCGGGTGATGAGGAGTACGA
CTTCGAGTACGAAGATGCGGACGATGACGAATCGGGAGATGTCGGTATCG
AGAACAAATACTATAATGCCAAACAGATGAAGATAGACAACCCGGAGGAG
GCCATCGATGAATTCTTGGGAGTTCCGGATCTAGAACAAGACAAGGGTGA
CTGGGGGTTCAAAGGACTGAAGCAGGCTATCAAGTTGGAATTCAAGCTTG
GGAGATATAGCGATGCCGTTGAACACTACAGAGAGCTCCTCACTTACGTC
AAGTCGGCCGTCACTCGTAATTACTCCGAAAAGTCCATCAACAACATGCT
AGATTATATCGAGAAGGGTTCGGATGATGACACAGCTTACCAGTGCATGG
AGGAATTCTATTCTTTGACCCTGCGCTCATTCCAAAATACCAACAACGAG
CGACTATGGTTGAAGACAAACATCAAGTTGGCACGTCTTTGGCTGGAACG
AAAAGAGTACGGCCAGCTGAGCAAGAAGGTGCGGGAGTTGCATCGGGCAT
GCCAGCGAGAAGATGGAACCGACGATCCGAGTAAAGGAACATATCTCCTC
GAACTATACGCCCTTGAGATACAGATGTATGCCGAGACGAAGAATAACAA
ACGACTAAAAGCGCTCTACCAGCGTGCCCTTCGCGTTCGGTCGGCGGTGC
CGCACCCCAAGATCATGGGAATCATCCGAGAATGCGGAGGGAAAATGCAT
ATGAGCGAGGAAAACTGGGAGGAAGCGCAGAGCGACTTCTTCGAGTCATT
CCGGAACTACGATGAGGCGGGCTCAATACAGCGAATCCAGGTGCTCAAGT
ATCTCGTGTTGACCACGATGCTGATGAAATCGGATATCAACCCATTTTAT
TCCCAAGAAACCAAGCCGTACAAGAACGACCCCCGCATATCCGCTATGAC
CGATCTAGTCGATGCATTCCAACGCGACGACATCCACGCCTACGAAGCCA
TCCTTAGCAAAAACCCGGACGTCCTGGCCGATCCCTTCATCGCCGAGAAT
ATTGACGAGGTCAGCCGAAACATGCGGACGAAGGCTGTTCTCAAACTGAT
CGCACCGTACACACGATTCACCCTTAAGTTCATCTCGAAACACATCCGGG
TCTCGGTACCCGAGGTACAAGACATCCTGAGCTTCCTGATCCTGGACAAG
AAGCTCAATGCCAAGATCGACCAGGAAAACGGGATTGTGGAGGTTGAAAG
CGCTAGCGACGTGGACCGGTTGCGGGCACTGCAGGAGTGGAACGCATCAT
TGCGGTCTCTTTGGCAGGCGACCTTGAACGACGGGGAGGGATTCAGGGAA
GATCCCGCACAGCTGCACGGTATGAGAGGTGGAGGGCCCATGTTCCAACC
CGGGTTTGGAGATGAACCGCATGCAGGATTACGCGCTGGTGGTCGCCGAC
TGCGGGGTGGACACAGAGGCAGAGGCGGCGGCGGAGGGCCTGGAACGAAA
CTCGGCCTGGGAGGCGTCTAGATGTCTGACGATGATGATTTCATGCAAGA
TTCGGGTGATGAGGAGTACGACTTCGAGTACGAAGATGCGGACGATGACG
AATCGGGAGATGTCGGTATCGAGAACAAATACTATAATGCCAAACAGATG
AAGATAGACAACCCGGAGGAGGCCATCGATGAATTCTTGGGAGTTCCGGA
TCTAGAACAAGACAAGGGTGACTGGGGGTTCAAAGGACTGAAGCAGGCTA
TCAAGTTGGAATTCAAGCTTGGGAGATATAGCGATGCCGTTGAACACTAC
AGAGAGCTCCTCACTTACGTCAAGTCGGCCGTCACTCGTAATTACTCCGA
AAAGTCCATCAACAACATGCTAGATTATATCGAGAAGGGTTCGGATGATG
ACACAGCTTACCAGTGCATGGAGGAATTCTATTCTTTGACCCTGCGCTCA
TTCCAAAATACCAACAACGAGCGACTATGGTTGAAGACAAACATCAAGTT
GGCACGTCTTTGGCTGGAACGAAAAGAGTACGGCCAGCTGAGCAAGAAGG
TGCGGGAGTTGCATCGGGCATGCCAGCGAGAAGATGGAACCGACGATCCG
AGTAAAGGAACATATCTCCTCGAACTATACGCCCTTGAGATACAGATGTA
TGCCGAGACGAAGAATAACAAACGACTAAAAGCGCTCTACCAGCGTGCCC
TTCGCGTTCGGTCGGCGGTGCCGCACCCCAAGATCATGGGAATCATCCGA
GAATGCGGAGGGAAAATGCATATGAGCGAGGAAAACTGGGAGGAAGCGCA
GAGCGACTTCTTCGAGTCATTCCGGAACTACGATGAGGCGGGCTCAATAC
AGCGAATCCAGGTGCTCAAGTATCTCGTGTTGACCACGATGCTGATGAAA
TCGGATATCAACCCATTTTATTCCCAAGAAACCAAGCCGTACAAGAACGA
CCCCCGCATATCCGCTATGACCGATCTAGTCGATGCATTCCAACGCGACG
ACATCCACGCCTACGAAGCCATCCTTAGCAAAAACCCGGACGTCCTGGCC
GATCCCTTCATCGCCGAGAATATTGACGAGGTCAGCCGAAACATGCGGAC
GAAGGCTGTTCTCAAACTGATCGCACCGTACACACGATTCACCCTTAAGT
TCATCTCGAAACACATCCGGGTCTCGGTACCCGAGGTACAAGACATCCTG
AGCTTCCTGATCCTGGACAAGAAGCTCAATGCCAAGATCGACCAGGAAAA
CGGGATTGTGGAGGTTGAAAGCGCTAGCGACGTGGACCGGTTGCGGGCAC
TGCAGGAGTGGAACGCATCATTGCGGTCTCTTTGGCAGGCGACCTTGAAC
GACGGGGAGGGATTCAGGGAAGATCCCGCACAGCTGCACGGTATGAGAGG
TGGAGGGCCCATGTTCCAACCCGGGTTTGGAGATGAACCGCATGCAGGAT
TACGCGCTGGTGGTCGCCGACTGCGGGGTGGACACAGAGGCAGAGGCGGC
GGCGGAGGGCCTGGAACGAAACTCGGCCTGGGAGGCGTCTAGATGTCTGA
CGATGATGATTTCATGCAAGATTCGGGTGATGAGGAGTACGACTTCGAGT
ACGAAGATGCGGACGATGACGAATCGGGAGATGTCGGTATCGAGAACAAA
TACTATAATGCCAAACAGATGAAGATAGACAACCCGGAGGAGGCCATCGA
TGAATTCTTGGGAGTTCCGGATCTAGAACAAGACAAGGGTGACTGGGGGT
TCAAAGGACTGAAGCAGGCTATCAAGTTGGAATTCAAGCTTGGGAGATAT
AGCGATGCCGTTGAACACTACAGAGAGCTCCTCACTTACGTCAAGTCGGC
CGTCACTCGTAATTACTCCGAAAAGTCCATCAACAACATGCTAGATTATA
TCGAGAAGGGTTCGGATGATGACACAGCTTACCAGTGCATGGAGGAATTC
TATTCTTTGACCCTGCGCTCATTCCAAAATACCAACAACGAGCGACTATG
GTTGAAGACAAACATCAAGTTGGCACGTCTTTGGCTGGAACGAAAAGAGT
ACGGCCAGCTGAGCAAGAAGGTGCGGGAGTTGCATCGGGCATGCCAGCGA
GAAGATGGAACCGACGATCCGAGTAAAGGAACATATCTCCTCGAACTATA
CGCCCTTGAGATACAGATGTATGCCGAGACGAAGAATAACAAACGACTAA
AAGCGCTCTACCAGCGTGCCCTTCGCGTTCGGTCGGCGGTGCCGCACCCC
AAGATCATGGGAATCATCCGAGAATGCGGAGGGAAAATGCATATGAGCGA
GGAAAACTGGGAGGAAGCGCAGAGCGACTTCTTCGAGTCATTCCGGAACT
ACGATGAGGCGGGCTCAATACAGCGAATCCAGGTGCTCAAGTATCTCGTG
TTGACCACGATGCTGATGAAATCGGATATCAACCCATTTTATTCCCAAGA
AACCAAGCCGTACAAGAACGACCCCCGCATATCCGCTATGACCGATCTAG
TCGATGCATTCCAACGCGACGACATCCACGCCTACGAAGCCATCCTTAGC
AAAAACCCGGACGTCCTGGCCGATCCCTTCATCGCCGAGAATATTGACGA
GGTCAGCCGAAACATGCGGACGAAGGCTGTTCTCAAACTGATCGCACCGT
ACACACGATTCACCCTTAAGTTCATCTCGAAACACATCCGGGTCTCGGTA
CCCGAGGTACAAGACATCCTGAGCTTCCTGATCCTGGACAAGAAGCTCAA
TGCCAAGATCGACCAGGAAAACGGGATTGTGGAGGTTGAAAGCGCTAGCG
ACGTGGACCGGTTGCGGGCACTGCAGGAGTGGAACGCATCATTGCGGTCT
CTTTGGCAGGCGACCTTGAACGACGGGGAGGGATTCAGGGAAGATCCCGC
ACAGCTGCACGGTATGAGAGGTGGAGGGCCCATGTTCCAACCCGGGTTTG
GAGATGAACCGCATGCAGGATTACGCGCTGGTGGTCGCCGACTGCGGGGT
GGACACAGAGGCAGAGGCGGCGGCGGAGGGCCTGGAACGAAACTCGGCCT
GGGAGGCGTCTAGATGTCTGACGATGATGATTTCATGCAAGATTCGGGTG
ATGAGGAGTACGACTTCGAGTACGAAGATGCGGACGATGACGAATCGGGA
GATGTCGGTATCGAGAACAAATACTATAATGCCAAACAGATGAAGATAGA
CAACCCGGAGGAGGCCATCGATGAATTCTTGGGAGTTCCGGATCTAGAAC
AAGACAAGGGTGACTGGGGGTTCAAAGGACTGAAGCAGGCTATCAAGTTG
GAATTCAAGCTTGGGAGATATAGCGATGCCGTTGAACACTACAGAGAGCT
CCTCACTTACGTCAAGTCGGCCGTCACTCGTAATTACTCCGAAAAGTCCA
TCAACAACATGCTAGATTATATCGAGAAGGGTTCGGATGATGACACAGCT
TACCAGTGCATGGAGGAATTCTATTCTTTGACCCTGCGCTCATTCCAAAA
TACCAACAACGAGCGACTATGGTTGAAGACAAACATCAAGTTGGCACGTC
TTTGGCTGGAACGAAAAGAGTACGGCCAGCTGAGCAAGAAGGTGCGGGAG
TTGCATCGGGCATGCCAGCGAGAAGATGGAACCGACGATCCGAGTAAAGG
AACATATCTCCTCGAACTATACGCCCTTGAGATACAGATGTATGCCGAGA
CGAAGAATAACAAACGACTAAAAGCGCTCTACCAGCGTGCCCTTCGCGTT
CGGTCGGCGGTGCCGCACCCCAAGATCATGGGAATCATCCGAGAATGCGG
AGGGAAAATGCATATGAGCGAGGAAAACTGGGAGGAAGCGCAGAGCGACT
TCTTCGAGTCATTCCGGAACTACGATGAGGCGGGCTCAATACAGCGAATC
CAGGTGCTCAAGTATCTCGTGTTGACCACGATGCTGATGAAATCGGATAT
CAACCCATTTTATTCCCAAGAAACCAAGCCGTACAAGAACGACCCCCGCA
TATCCGCTATGACCGATCTAGTCGATGCATTCCAACGCGACGACATCCAC
GCCTACGAAGCCATCCTTAGCAAAAACCCGGACGTCCTGGCCGATCCCTT
CATCGCCGAGAATATTGACGAGGTCAGCCGAAACATGCGGACGAAGGCTG
TTCTCAAACTGATCGCACCGTACACACGATTCACCCTTAAGTTCATCTCG
AAACACATCCGGGTCTCGGTACCCGAGGTACAAGACATCCTGAGCTTCCT
GATCCTGGACAAGAAGCTCAATGCCAAGATCGACCAGGAAAACGGGATTG
TGGAGGTTGAAAGCGCTAGCGACGTGGACCGGTTGCGGGCACTGCAGGAG
TGGAACGCATCATTGCGGTCTCTTTGGCAGGCGACCTTGAACGACGGGGA
GGGATTCAGGGAAGATCCCGCACAGCTGCACGGTATGAGAGGTGGAGGGC
CCATGTTCCAACCCGGGTTTGGAGATGAACCGCATGCAGGATTACGCGCT
GGTGGTCGCCGACTGCGGGGTGGACACAGAGGCAGAGGCGGCGGCGGAGG
GCCTGGAACGAAACTCGGCCTGGGAGGCGTCTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002087-T2.utr5p1 | KJC3_002087-T2.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036390 |
| DBxref | InterPro:IPR000717 |
| DBxref | PFAM:PF01399 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:1628215..1631097 + |
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