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KJC3_002093-T1, KJC3_002093-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_002093-T1
Unique NameKJC3_002093-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:1650505..1651470-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_002093-T1 ID=KJC3_002093-T1|Name=KJC3_002093-T1|organism=Aspergillus niger KJC3|type=mRNA|length=966bp|location=Sequence derived from alignment at ch2:1650505..1651470- (Aspergillus niger KJC3)
ATGCAGTCATGTGACAGGCTCACCCTTGAGGCTGTCGGCGAATCACGGGA
CCAGGGCACAAGCCCTGACAACCACAACTCGCTAAGCGACACCACCCCAG
ATCCCAGAGCAACTTCGATACGCCCAGCGACGACGACAACGACAACCAGC
CCTTCAACGGAATCGCCAGGTAGGTCCATTTTGCGCCCTCACGTGGGATT
ATTGTCATTTTTCCCCAGGCCGGGAATTTTTTTTTTATCTGGATTTTTCG
TCGCTAACAAATTGTGCCATATAGTTCCACATAATTCAAGATGAGTACGT
GCCAACGCGATATACCACCGCCCAGTCCGATCTATCGACGAGAACAATAT
CCAGACTGACATACCGATTCTGTTTACAGCGAAGGGTACCTCCAGCTTCG
GAAAGCGCCACAACAAGACTCACACTCTTTGCCGGCGTTGTGGTCAGTAT
TTTACACTACTCCGAAAATTTATATATATCCTCCGGGCGGAAATTATTAT
ATACGGGATATCTCTACAATCAACGGAACGGGAGAGAAGGAACGGAATAA
TAAATGACTGCCGGGAGAGATATATATGAAGGTTATCGGGAAACGACCAG
ATGGGCTAATACGTTCGGATTGAATTCAGGCCGCCGCTCCTTCCACGTCC
AGAAGTCGACTTGCTCCAACTGCGGTTACCCTGCCGCTAAGACTCGCAAG
TGTACGAATCCTTTTCCCCAAAATCCCACCATCGAAGAACAGCCGCTGGT
TCCTTGAAACCTTGGATACGGATTGTATGAAAGTGTTTGGATGAACATAT
TGGCTTACGAAGTTCGTTTTATACAGTCAACTGGAGCGAGAAGGCCAAGC
GCAGAAAGACCACCGGCTCCGGCAGAATGCGTCACCTCAAGGAGGTCCAC
CGCCGCTTCCACAACGGCTTCCAGGTCGGCACCCCCAAGGGCGCTCGTGG
TCCCGAGAACCACTAG
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Coding sequence (CDS) from alignment at ch2:1650505..1651470-

>KJC3_002093-T1 ID=KJC3_002093-T1|Name=KJC3_002093-T1|organism=Aspergillus niger KJC3|type=CDS|length=1776bp|location=Sequence derived from alignment at ch2:1650505..1651470- (Aspergillus niger KJC3)
TCAACTGGAGCGAGAAGGCCAAGCGCAGAAAGACCACCGGCTCCGGCAGA
ATGCGTCACCTCAAGGAGGTCCACCGCCGCTTCCACAACGGCTTCCAGGT
CGGCACCCCCAAGGGCGCTCGTGGTCCCGAGAACCACTAGGCCGCCGCTC
CTTCCACGTCCAGAAGTCGACTTGCTCCAACTGCGGTTACCCTGCCGCTA
AGACTCGCAAGTCGAAGGGTACCTCCAGCTTCGGAAAGCGCCACAACAAG
ACTCACACTCTTTGCCGGCGTTGTGATGCAGTCATGTGACAGGCTCACCC
TTGAGGCTGTCGGCGAATCACGGGACCAGGGCACAAGCCCTGACAACCAC
AACTCGCTAAGCGACACCACCCCAGATCCCAGAGCAACTTCGATACGCCC
AGCGACGACGACAACGACAACCAGCCCTTCAACGGAATCGCCAGTCAACT
GGAGCGAGAAGGCCAAGCGCAGAAAGACCACCGGCTCCGGCAGAATGCGT
CACCTCAAGGAGGTCCACCGCCGCTTCCACAACGGCTTCCAGGTCGGCAC
CCCCAAGGGCGCTCGTGGTCCCGAGAACCACTAGGCCGCCGCTCCTTCCA
CGTCCAGAAGTCGACTTGCTCCAACTGCGGTTACCCTGCCGCTAAGACTC
GCAAGTCGAAGGGTACCTCCAGCTTCGGAAAGCGCCACAACAAGACTCAC
ACTCTTTGCCGGCGTTGTGATGCAGTCATGTGACAGGCTCACCCTTGAGG
CTGTCGGCGAATCACGGGACCAGGGCACAAGCCCTGACAACCACAACTCG
CTAAGCGACACCACCCCAGATCCCAGAGCAACTTCGATACGCCCAGCGAC
GACGACAACGACAACCAGCCCTTCAACGGAATCGCCAGTCAACTGGAGCG
AGAAGGCCAAGCGCAGAAAGACCACCGGCTCCGGCAGAATGCGTCACCTC
AAGGAGGTCCACCGCCGCTTCCACAACGGCTTCCAGGTCGGCACCCCCAA
GGGCGCTCGTGGTCCCGAGAACCACTAGGCCGCCGCTCCTTCCACGTCCA
GAAGTCGACTTGCTCCAACTGCGGTTACCCTGCCGCTAAGACTCGCAAGT
CGAAGGGTACCTCCAGCTTCGGAAAGCGCCACAACAAGACTCACACTCTT
TGCCGGCGTTGTGATGCAGTCATGTGACAGGCTCACCCTTGAGGCTGTCG
GCGAATCACGGGACCAGGGCACAAGCCCTGACAACCACAACTCGCTAAGC
GACACCACCCCAGATCCCAGAGCAACTTCGATACGCCCAGCGACGACGAC
AACGACAACCAGCCCTTCAACGGAATCGCCAGTCAACTGGAGCGAGAAGG
CCAAGCGCAGAAAGACCACCGGCTCCGGCAGAATGCGTCACCTCAAGGAG
GTCCACCGCCGCTTCCACAACGGCTTCCAGGTCGGCACCCCCAAGGGCGC
TCGTGGTCCCGAGAACCACTAGGCCGCCGCTCCTTCCACGTCCAGAAGTC
GACTTGCTCCAACTGCGGTTACCCTGCCGCTAAGACTCGCAAGTCGAAGG
GTACCTCCAGCTTCGGAAAGCGCCACAACAAGACTCACACTCTTTGCCGG
CGTTGTGATGCAGTCATGTGACAGGCTCACCCTTGAGGCTGTCGGCGAAT
CACGGGACCAGGGCACAAGCCCTGACAACCACAACTCGCTAAGCGACACC
ACCCCAGATCCCAGAGCAACTTCGATACGCCCAGCGACGACGACAACGAC
AACCAGCCCTTCAACGGAATCGCCAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RPL37KJC3_002093Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002093-T1KJC3_002093-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002093-T1.cdsKJC3_002093-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002093-T1.exon4KJC3_002093-T1.exon4Aspergillus niger KJC3exon
KJC3_002093-T1.exon3KJC3_002093-T1.exon3Aspergillus niger KJC3exon
KJC3_002093-T1.exon2KJC3_002093-T1.exon2Aspergillus niger KJC3exon
KJC3_002093-T1.exon1KJC3_002093-T1.exon1Aspergillus niger KJC3exon


Properties
Property NameValue
DBxrefInterPro:IPR011332
DBxrefInterPro:IPR018267
DBxrefInterPro:IPR001569
DBxrefInterPro:IPR011331
DBxrefPFAM:PF01907
Product60S ribosomal protein L37
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:1650505..1651470 -
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