You are here

Home

KJC3_002106-T1, KJC3_002106-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_002106-T1
Unique NameKJC3_002106-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:1687760..1689085-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_002106-T1 ID=KJC3_002106-T1|Name=KJC3_002106-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1326bp|location=Sequence derived from alignment at ch2:1687760..1689085- (Aspergillus niger KJC3)
ATGGCTACCGAAGATGATAACTTCGATATTGACATCTATGGAGATGGCGG
GGGCTACAACGCCAATGAGCAGGGCGACTTTAAGCCCGAGGATGAGATGA
AACATGATGACACAGAGCTTATCCTAGATGCGCCGGAACCCACACAGAAC
GGGAACCCCAACCAAGGCGACGGCTCCTCCGATGGCACCGTCAAGCCGGA
CAGTGAAGGCGGCGCTCCCCATAGTGACCCTGTAACCCAGGCGGCAAACC
CGCAATCCGCGGCCAAGGACGCCCCTGCTCCCCAGCAGGGAGTCAAGCGC
AAGGAGCACGATGATCGACCGACAGACCCTGATGCTACCCCTGCTCTGCT
CATATCGGACTTGTATTGGTGGACCACGGATGACGACATCCGCGGCTGGG
TGTGCCAGGCGGACTGCGAGGATGAACTGAAGGACGTAACGTTCAGCGAA
CACAAAGTGAACGGTAAAAGCAAAGGGTAAGAGGGCAGCAGGAAGCTGGA
AGCAGCGGTGAAACATCAGTCCACTGACGTGGTGTTAATAGACAAGCGTT
CCTCGAATTCACCACTCTCCAGGCAGCTACAGCGACGAAACACAAGATCG
AGTCATTCAGCGCCGGCGGACAAACGCGCAAGCACATGGTCACCTACACC
AGCCCGCAACCGAACCCGTTCCGCACGCTGCCCAAGGATGCGCCGATGCG
CAAGGACAACCAGGCGCGCTCGATGTCCGGCGGCTTCAACTCGCCCAACC
CGAACATGAACTTTAGCGGTGGCATGAACAACATGGGCGGAGGCTATCGG
GGCGGACGCGGTGGATACAACAACCGCGGCGGCATGTCCGGCGGCATGGG
TGGTAACTTCGGCAACAACCGTAACTTCCAGAACCCGATGGGTGGCTTCC
AAGGGCCGATGGTGGGCGGAGGCTTCCAGGGTAATCCCATGGGGATGCAG
AACTACGGCTTCAACAACCGCGGGGGCATGATGGGCGGTATGCGCGGTGG
CCCTGGAGGCATGCGCGGTCGTGGTGGTGGCATGGCAGGACCCAATATGA
TGGGGATGCCCGGAATGAATCCGATGGGAGGGATGGGGATGAATGCGATG
CCGGGGGCAATGAATCCGATGATGGGAGGTATGACGGGCAACATGGGGAT
GCAGGGTGAGTAGATTCCAGCATAGTGTGCGTGTGCTTTATGCTGATAGC
AGAGCAGGACAAGGTGGATTCCAGGGCCCCAACCCAGCCTTTAACCAGGG
ATTCTTTCCTCCCAACCAGGGCGTCGGCGATGGATCATGGAACCCTCATG
GGGCCAAGCGCAGTCGCCAGGAGTGA
back to top

Coding sequence (CDS) from alignment at ch2:1687760..1689085-

>KJC3_002106-T1 ID=KJC3_002106-T1|Name=KJC3_002106-T1|organism=Aspergillus niger KJC3|type=CDS|length=3627bp|location=Sequence derived from alignment at ch2:1687760..1689085- (Aspergillus niger KJC3)
GACAAGGTGGATTCCAGGGCCCCAACCCAGCCTTTAACCAGGGATTCTTT
CCTCCCAACCAGGGCGTCGGCGATGGATCATGGAACCCTCATGGGGCCAA
GCGCAGTCGCCAGGAGTGAACAAGCGTTCCTCGAATTCACCACTCTCCAG
GCAGCTACAGCGACGAAACACAAGATCGAGTCATTCAGCGCCGGCGGACA
AACGCGCAAGCACATGGTCACCTACACCAGCCCGCAACCGAACCCGTTCC
GCACGCTGCCCAAGGATGCGCCGATGCGCAAGGACAACCAGGCGCGCTCG
ATGTCCGGCGGCTTCAACTCGCCCAACCCGAACATGAACTTTAGCGGTGG
CATGAACAACATGGGCGGAGGCTATCGGGGCGGACGCGGTGGATACAACA
ACCGCGGCGGCATGTCCGGCGGCATGGGTGGTAACTTCGGCAACAACCGT
AACTTCCAGAACCCGATGGGTGGCTTCCAAGGGCCGATGGTGGGCGGAGG
CTTCCAGGGTAATCCCATGGGGATGCAGAACTACGGCTTCAACAACCGCG
GGGGCATGATGGGCGGTATGCGCGGTGGCCCTGGAGGCATGCGCGGTCGT
GGTGGTGGCATGGCAGGACCCAATATGATGGGGATGCCCGGAATGAATCC
GATGGGAGGGATGGGGATGAATGCGATGCCGGGGGCAATGAATCCGATGA
TGGGAGGTATGACGGGCAACATGGGGATGCAGGATGGCTACCGAAGATGA
TAACTTCGATATTGACATCTATGGAGATGGCGGGGGCTACAACGCCAATG
AGCAGGGCGACTTTAAGCCCGAGGATGAGATGAAACATGATGACACAGAG
CTTATCCTAGATGCGCCGGAACCCACACAGAACGGGAACCCCAACCAAGG
CGACGGCTCCTCCGATGGCACCGTCAAGCCGGACAGTGAAGGCGGCGCTC
CCCATAGTGACCCTGTAACCCAGGCGGCAAACCCGCAATCCGCGGCCAAG
GACGCCCCTGCTCCCCAGCAGGGAGTCAAGCGCAAGGAGCACGATGATCG
ACCGACAGACCCTGATGCTACCCCTGCTCTGCTCATATCGGACTTGTATT
GGTGGACCACGGATGACGACATCCGCGGCTGGGTGTGCCAGGCGGACTGC
GAGGATGAACTGAAGGACGTAACGTTCAGCGAACACAAAGTGAACGGTAA
AAGCAAAGGGACAAGGTGGATTCCAGGGCCCCAACCCAGCCTTTAACCAG
GGATTCTTTCCTCCCAACCAGGGCGTCGGCGATGGATCATGGAACCCTCA
TGGGGCCAAGCGCAGTCGCCAGGAGTGAACAAGCGTTCCTCGAATTCACC
ACTCTCCAGGCAGCTACAGCGACGAAACACAAGATCGAGTCATTCAGCGC
CGGCGGACAAACGCGCAAGCACATGGTCACCTACACCAGCCCGCAACCGA
ACCCGTTCCGCACGCTGCCCAAGGATGCGCCGATGCGCAAGGACAACCAG
GCGCGCTCGATGTCCGGCGGCTTCAACTCGCCCAACCCGAACATGAACTT
TAGCGGTGGCATGAACAACATGGGCGGAGGCTATCGGGGCGGACGCGGTG
GATACAACAACCGCGGCGGCATGTCCGGCGGCATGGGTGGTAACTTCGGC
AACAACCGTAACTTCCAGAACCCGATGGGTGGCTTCCAAGGGCCGATGGT
GGGCGGAGGCTTCCAGGGTAATCCCATGGGGATGCAGAACTACGGCTTCA
ACAACCGCGGGGGCATGATGGGCGGTATGCGCGGTGGCCCTGGAGGCATG
CGCGGTCGTGGTGGTGGCATGGCAGGACCCAATATGATGGGGATGCCCGG
AATGAATCCGATGGGAGGGATGGGGATGAATGCGATGCCGGGGGCAATGA
ATCCGATGATGGGAGGTATGACGGGCAACATGGGGATGCAGGATGGCTAC
CGAAGATGATAACTTCGATATTGACATCTATGGAGATGGCGGGGGCTACA
ACGCCAATGAGCAGGGCGACTTTAAGCCCGAGGATGAGATGAAACATGAT
GACACAGAGCTTATCCTAGATGCGCCGGAACCCACACAGAACGGGAACCC
CAACCAAGGCGACGGCTCCTCCGATGGCACCGTCAAGCCGGACAGTGAAG
GCGGCGCTCCCCATAGTGACCCTGTAACCCAGGCGGCAAACCCGCAATCC
GCGGCCAAGGACGCCCCTGCTCCCCAGCAGGGAGTCAAGCGCAAGGAGCA
CGATGATCGACCGACAGACCCTGATGCTACCCCTGCTCTGCTCATATCGG
ACTTGTATTGGTGGACCACGGATGACGACATCCGCGGCTGGGTGTGCCAG
GCGGACTGCGAGGATGAACTGAAGGACGTAACGTTCAGCGAACACAAAGT
GAACGGTAAAAGCAAAGGGACAAGGTGGATTCCAGGGCCCCAACCCAGCC
TTTAACCAGGGATTCTTTCCTCCCAACCAGGGCGTCGGCGATGGATCATG
GAACCCTCATGGGGCCAAGCGCAGTCGCCAGGAGTGAACAAGCGTTCCTC
GAATTCACCACTCTCCAGGCAGCTACAGCGACGAAACACAAGATCGAGTC
ATTCAGCGCCGGCGGACAAACGCGCAAGCACATGGTCACCTACACCAGCC
CGCAACCGAACCCGTTCCGCACGCTGCCCAAGGATGCGCCGATGCGCAAG
GACAACCAGGCGCGCTCGATGTCCGGCGGCTTCAACTCGCCCAACCCGAA
CATGAACTTTAGCGGTGGCATGAACAACATGGGCGGAGGCTATCGGGGCG
GACGCGGTGGATACAACAACCGCGGCGGCATGTCCGGCGGCATGGGTGGT
AACTTCGGCAACAACCGTAACTTCCAGAACCCGATGGGTGGCTTCCAAGG
GCCGATGGTGGGCGGAGGCTTCCAGGGTAATCCCATGGGGATGCAGAACT
ACGGCTTCAACAACCGCGGGGGCATGATGGGCGGTATGCGCGGTGGCCCT
GGAGGCATGCGCGGTCGTGGTGGTGGCATGGCAGGACCCAATATGATGGG
GATGCCCGGAATGAATCCGATGGGAGGGATGGGGATGAATGCGATGCCGG
GGGCAATGAATCCGATGATGGGAGGTATGACGGGCAACATGGGGATGCAG
GATGGCTACCGAAGATGATAACTTCGATATTGACATCTATGGAGATGGCG
GGGGCTACAACGCCAATGAGCAGGGCGACTTTAAGCCCGAGGATGAGATG
AAACATGATGACACAGAGCTTATCCTAGATGCGCCGGAACCCACACAGAA
CGGGAACCCCAACCAAGGCGACGGCTCCTCCGATGGCACCGTCAAGCCGG
ACAGTGAAGGCGGCGCTCCCCATAGTGACCCTGTAACCCAGGCGGCAAAC
CCGCAATCCGCGGCCAAGGACGCCCCTGCTCCCCAGCAGGGAGTCAAGCG
CAAGGAGCACGATGATCGACCGACAGACCCTGATGCTACCCCTGCTCTGC
TCATATCGGACTTGTATTGGTGGACCACGGATGACGACATCCGCGGCTGG
GTGTGCCAGGCGGACTGCGAGGATGAACTGAAGGACGTAACGTTCAGCGA
ACACAAAGTGAACGGTAAAAGCAAAGG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_002106KJC3_002106Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002106-T1KJC3_002106-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002106-T1.cdsKJC3_002106-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002106-T1.exon3KJC3_002106-T1.exon3Aspergillus niger KJC3exon
KJC3_002106-T1.exon2KJC3_002106-T1.exon2Aspergillus niger KJC3exon
KJC3_002106-T1.exon1KJC3_002106-T1.exon1Aspergillus niger KJC3exon


Properties
Property NameValue
DBxrefInterPro:IPR035979
DBxrefInterPro:IPR012677
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:1687760..1689085 -
Powered by Drupal