|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:1707855..1708368- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_002115-T1 ID=KJC3_002115-T1|Name=KJC3_002115-T1|organism=Aspergillus niger KJC3|type=mRNA|length=514bp|location=Sequence derived from alignment at ch2:1707855..1708368- (Aspergillus niger KJC3)
ATGTCTGCGATTGGAACCCTCGTCTTCTGCACTGACTGCGGCTCCCTGTT
GGATGGCTCAATTGGAGATCCAACTAAGATTCTTGTCTGCGATGTCTGCG
GAGCTAGGAATAAAGGTAGGTTTGCCTTGTTGGTATCCTAGGTTGCAAAG
TTGCATTCACTGACCTTGTCCCCTTTAACTTCCTATTCAGACACCGTTCC
CCAGACTATTGTCTCCGAGTCCAAGCCGAGCGCATTCCCGTCTGCCTTGA
GAGCGAAAAGATCTGCGGTCCAGACCTTGACGGCGTCCGACAGAAGAACC
GAAGCCCTTACCCAACATACTTGCATCAAATGTGGAAGGAAAGAGATGTA
CTACACCACCGTACAACTGCGCAGTGCAGATGAAGGTAGTACGGTGTTTT
ACACGTGTGTCTGTGGTCACAAGTATGCAACCTACAAACCCCTCTCTTTC
CCTGCCTTTTCCGCAATAGCCCATACTAATCTGTCTGTTACACAGGGAAT
CGACGAACAACTAA back to topCoding sequence (CDS) from alignment at ch2:1707855..1708368- >KJC3_002115-T1 ID=KJC3_002115-T1|Name=KJC3_002115-T1|organism=Aspergillus niger KJC3|type=CDS|length=1098bp|location=Sequence derived from alignment at ch2:1707855..1708368- (Aspergillus niger KJC3)
GGAATCGACGAACAACTAAACACCGTTCCCCAGACTATTGTCTCCGAGTC
CAAGCCGAGCGCATTCCCGTCTGCCTTGAGAGCGAAAAGATCTGCGGTCC
AGACCTTGACGGCGTCCGACAGAAGAACCGAAGCCCTTACCCAACATACT
TGCATCAAATGTGGAAGGAAAGAGATGTACTACACCACCGTACAACTGCG
CAGTGCAGATGAAGGTAGTACGGTGTTTTACACGTGTGTCTGTGGTCACA
AATGTCTGCGATTGGAACCCTCGTCTTCTGCACTGACTGCGGCTCCCTGT
TGGATGGCTCAATTGGAGATCCAACTAAGATTCTTGTCTGCGATGTCTGC
GGAGCTAGGAATAAAGGGAATCGACGAACAACTAAACACCGTTCCCCAGA
CTATTGTCTCCGAGTCCAAGCCGAGCGCATTCCCGTCTGCCTTGAGAGCG
AAAAGATCTGCGGTCCAGACCTTGACGGCGTCCGACAGAAGAACCGAAGC
CCTTACCCAACATACTTGCATCAAATGTGGAAGGAAAGAGATGTACTACA
CCACCGTACAACTGCGCAGTGCAGATGAAGGTAGTACGGTGTTTTACACG
TGTGTCTGTGGTCACAAATGTCTGCGATTGGAACCCTCGTCTTCTGCACT
GACTGCGGCTCCCTGTTGGATGGCTCAATTGGAGATCCAACTAAGATTCT
TGTCTGCGATGTCTGCGGAGCTAGGAATAAAGGGAATCGACGAACAACTA
AACACCGTTCCCCAGACTATTGTCTCCGAGTCCAAGCCGAGCGCATTCCC
GTCTGCCTTGAGAGCGAAAAGATCTGCGGTCCAGACCTTGACGGCGTCCG
ACAGAAGAACCGAAGCCCTTACCCAACATACTTGCATCAAATGTGGAAGG
AAAGAGATGTACTACACCACCGTACAACTGCGCAGTGCAGATGAAGGTAG
TACGGTGTTTTACACGTGTGTCTGTGGTCACAAATGTCTGCGATTGGAAC
CCTCGTCTTCTGCACTGACTGCGGCTCCCTGTTGGATGGCTCAATTGGAG
ATCCAACTAAGATTCTTGTCTGCGATGTCTGCGGAGCTAGGAATAAAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006379 | mRNA cleavage |
| GO:0006351 | transcription, DNA-templated |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003676 | nucleic acid binding |
| GO:0008270 | zinc ion binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR034004 |
| DBxref | InterPro:IPR019761 |
| DBxref | InterPro:IPR012164 |
| DBxref | InterPro:IPR001222 |
| DBxref | PFAM:PF01096 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:1707855..1708368 - |
|
