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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:1792133..1796158- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_002141-T1 ID=KJC3_002141-T1|Name=KJC3_002141-T1|organism=Aspergillus niger KJC3|type=mRNA|length=4026bp|location=Sequence derived from alignment at ch2:1792133..1796158- (Aspergillus niger KJC3)
GGCATCATCTTCTTGCACTTGGGCGGGGCAGTTCATCTCTTCAGATAATC
CACCCCAGAAGGTGCTACTAAGACTTGGAGTCAGTTCGATGGGATAGTCT
ACTATAGCTACGAGTCGTGCTGAATCTCATAGACGCCCTGCCCACCTTGT
CCAGGATGACCAGATCCCTCATCGTCTTACTGGCCTTGACCAAGGAAAGG
ATGAGGCTGAGCAGGGTGGCTTGTCTCATGCCTATCGCTAACGCCCGATT
GGCGTGATGAGAAAACCTTCTGTTGGAGCGGGGTAACGGGCGCTATGCTG
TTAATCATCTTTCAGCAGGTGCTACTGCTAACCCAATCCCTGCTTTGGAA
GCTCCGACTTTAGCTGCAGTACCGAACATGTCCTCCTGCTCCTCCGACAC
GGATCCAGATACAGATCCACACGTGGTTATGCGAGAACGAAATCATTACA
ATGGGGTCTACGATACACCCATTGCTACCTTTCTGGCAAATGCGTCTACC
TGCTTGGATTGCAATCTGGTGCTGCAAGTCATCGAGGCTGTCAAGCCAGG
CTGGGTAAAAGAGAACGCGCATCTCGGTCTAGTTGACTACCACCGGGAGA
AATCAGAGGATGACAAGTCTACGATAGTGCCTCAGTTTACCCTGCACCTG
CAGCAGTCGGTAGGAATGGCAGGTGTTAACTTGCACCAGCCTACTTCCTT
CCACTTTTTCAAACGTGCTGCCACTGCACGCTACGAGCCGCATCATGTCG
ATTCGCATGCTGGCAAAAGCCCTGAATTCACCGGGAATTTTCTCGCTCAG
TCCCTCGAAGTGACGCATGATTCAGGCTCACCAGCAGCCTTTGAACGAGC
TCATCAATGGCTATCATACTGTGACGAGCATGACGGAGCCTGTAAGCCTC
CAAATCCTGGATACAAGCCGCGGCGCCTTATCAATGTCGGCTCGTCGGAT
GGGACCCGCCATCCATTCCTCTTCGAACCTGCCGAGCCTGCCCGCTACGC
ATGTCTCAGCTACTGTTGGGGTAAGGATCTTGACCAAGTCCTGACCACAA
CGACCAATAACATAGAGTCGCATTACCAAGCTATCGAACTCTCCACCTTA
CCACTAGCCCTTCAAGACGCCATCACTGTCTGCCGAAACCTCGAGATACC
CAATCTATGGGTCGACTCTCTGTGCATCGTCCAAGATGACCGACTTGCCT
GGTTACACGATGCATCAGCAATGCACGATATCTATCTCAACTCTTATCTA
ACCATCTCAGTCAAGGAACCCAACTCATGCAAGTTGGGATTCCTCGGCAA
ACAGCGCTTCGGTGAGCCTACCTGGCAACAACTCCTTCGTCTCACCCGCC
CAGACAACGCCCCCGGCTTAGACCTGTTAATACGCCCAGGGGAGTTCTAC
CCCAGATCGTATCGAGACCGATCATCTCTCGACAGAAGGGGATGGTGTCT
ACAAGAGTCCATCCTACCCAACCGCAGACTCTGTTACGACGGCAACGAAA
TGATCTGGGAGTGTCTCTGTCGCCAGCTCTGTGAATGCGGACATGCAGTG
GCACCCCAAGTACCACACCTCACGACCCTGGATTACGGCAAGCTCGGAGC
TTCCATCAAAACCGAGATCCTGAAGGGGAAAATCCGCTCTAAGAGACAAG
GCTACTCAGAGTGGCACCAGTTTTCGCTGGGCTCACGATCATGGCTTGAG
CCTCATCAGGAGATATACCAGAGATGGAGAGACCTTGTCTCGGACTATTC
GCACCGATCACTCAGCAAGAAGCATGACCGATTACGGGCTATTTCGGGAC
TGGCGAGAATGGTGGGGAATAATATGCGGCAAGGACCCGAAGCAGCAGAT
GAGTATCTGGCTGGACTTTGGAAGAAAGAGCTCCCTTTTGATCTGTCGTG
GGAGGTTGAGCCCCTTACTGAAGGTGCGGAGGTACTGGAGAGTGGCGAGG
TAAATGCGAATGAAGCTGCGTATCATATCCCGAGCTGGTCGTGGGCGTCT
GTGGGAAGACCGGTCGGCTATCGATTCGACCTTCCGTTGGAATTATGGAA
ATATGAGCCTGTGGCCGTCGATCAGTGCATCGTTGAGCGAGTTCATTGTC
AACATGAGCTACTGGAGGACCCTATGAGTGCCGTTACAGACGGCTCTATT
GTTTTAACAGGCGCTTTTGCGCAAGTGAAGCTGATTCACCTCAAGCAAAC
ACAAGGAACCGCTCGAGAAGATCACGAAGGCCTCATCATCGATGAAGGTG
GTATCCAACGGGATACATTTGTGCAGTGCTCCACTGGGCACAAGTTGAGA
GTGACCCTCGACAAGCTGGAGGTGAACGATCCAGACGAATCGTATTACTG
TCTCCGATTGTTTTCGTGGGTATCTAAATACGACCGGAGGATGGGCCCGG
AGACATGGTTTCTCGTACTGGCGACATCAACGCGCAAACTAGGTGCTTTT
GAGAGAAGGGGTGTTGGTCTGTGGAATACATGGCGAGGTGATGCGGGTAA
CATGTCTTGTCCTATTTTCGAGGGGTGTGCAGCTGCTACAGTGGAGATTG
TTTAGATGAGACTGGCGCTTGGTTGGGCTAATGTGGAGACACGGCAGCAT
ATCTGTAATAGATGATCTACATTAGTTTAGCTTTGGGGTGTTATAGGCTG
CTAGATTGTACGGTGGACCCAATTTGGCTACCGTAAATATGACTAGGATT
GACTGTAGAATGATGAGAACACGTAAATGCTACAGCCTAGTGTGGCTGTG
AAATATCATCTACAGGATGCAGCAGCACATCAAACATGTTGCATAATTCC
TCATGGTAATTGGAAACGGCAGAAGTGATCGCCAAAAGCACGTGTGAATC
TCACTCAGCAATCCCCTCATCAGTTCATCGCTTCCCCACACACCCTATTG
CCAACCTCCCATCCCATCCCATCCATAGCCACTGAATTAAGGCTCCAACA
CAGTCAACTTCTCCGGCTGCTGCAACAGCAACAACGGCCCAGCAAGCACA
CTGTCCTCCGTCGGTGCCCCAGCCTCATCAGCAATAGCAATAGCAATAAT
GCCCGCACCCTTATCAAATGATCCCGGAATAACCGTCTCATTAGTGCTGA
TATCGAACGGCACACTAATATTCTGCAACCCATGAAAGAACACCGCATAG
TAATCCCCTCCCTCCACGAACGCCGGATCACTGCTAAACTCAAGCTGAAT
CTTCGACCCCGGATGCCCAGTAGTAGTATTCGTCACATACCCAATCTCCG
GCAAGTTCTGGTTCGGGTACGGATACTGCGGGTTCTCAGACGGACAACTC
CCCGACACCACGAAAGAGTTCGTCAACGCCAGGATCTGGTTAGCGTAGGG
ATACACCGTGTCAGCCGGGCCGGAGAAGGGACTCACGCCCCAGATATCGA
TGAGAGACCAGGCGTTATGCCGGGTTTCGATCTCACCGATGGCGACGAGG
GCGGAGCGGGTGTCGGTTGTGTTGGCTTCGCGGACGAGGCCGGTGAGGAA
GGCCATGCTGTTGACTTCGATGTAGACTTGGAGGGCGAGAAAGGTTTCCG
GGTCATTGTTGAAGCCGAAGCTGTAGTTGCAGGGGCCGGGTTTTAGGGAT
GTAGAGGAGATTTCGTCTTGGAAGATGCGGATGTGGCCGGCTTCGTTGTC
GCGGATTTCGGCGATGCGGTCGTAGGTGCTGTTTGGGTAGCCCAAGTCGC
TGAAGGAGGAAGGAGTGAAGGCTTCGACGCCTTGTTGGTAGAAGGAGTAG
ATGATCCATTCGGCGCTGAGGAGGTTTTGGAAGAGTACGTCGTCTGGACC
GGCGGGACCGGAGGATGTTGCTGGGATGACACGGGTGTAGTTGGCTGGTA
TGGGGGTGGGTTCGCCGGTGTATGTTGCGAAGAGGGGAGATTCGCCGGGG
ATGGGATTAGGGTCGAGTTTGGGGGATCTGGCTTTGGGGAGGGCTAGAGA
TAGCCCTATAAGGGAGGCTAGGGGGAGGATGTTGAGGGATAGCATTTTAG
TGAGGGACGGAAGTGATCGGTTCTGC back to topCoding sequence (CDS) from alignment at ch2:1792133..1796158- >KJC3_002141-T1 ID=KJC3_002141-T1|Name=KJC3_002141-T1|organism=Aspergillus niger KJC3|type=CDS|length=4236bp|location=Sequence derived from alignment at ch2:1792133..1796158- (Aspergillus niger KJC3)
CTATCGAACTCTCCACCTTACCACTAGCCCTTCAAGACGCCATCACTGTC
TGCCGAAACCTCGAGATACCCAATCTATGGGTCGACTCTCTGTGCATCGT
CCAAGATGACCGACTTGCCTGGTTACACGATGCATCAGCAATGCACGATA
TCTATCTCAACTCTTATCTAACCATCTCAGTCAAGGAACCCAACTCATGC
AAGTTGGGATTCCTCGGCAAACAGCGCTTCGGTGAGCCTACCTGGCAACA
ACTCCTTCGTCTCACCCGCCCAGACAACGCCCCCGGCTTAGACCTGTTAA
TACGCCCAGGGGAGTTCTACCCCAGATCGTATCGAGACCGATCATCTCTC
GACAGAAGGGGATGGTGTCTACAAGAGTCCATCCTACCCAACCGCAGACT
CTGTTACGACGGCAACGAAATGATCTGGGAGTGTCTCTGTCGCCAGCTCT
GTGAATGCGGACATGCAGTGGCACCCCAAGTACCACACCTCACGACCCTG
GATTACGGCAAGCTCGGAGCTTCCATCAAAACCGAGATCCTGAAGGGGAA
AATCCGCTCTAAGAGACAAGGCTACTCAGAGTGGCACCAGTTTTCGCTGG
GCTCACGATCATGGCTTGAGCCTCATCAGGAGATATACCAGAGATGGAGA
GACCTTGTCTCGGACTATTCGCACCGATCACTCAGCAAGAAGCATGACCG
ATTACGGGCTATTTCGGGACTGGCGAGAATGGTGGGGAATAATATGCGGC
AAGGACCCGAAGCAGCAGATGAGTATCTGGCTGGACTTTGGAAGAAAGAG
CTCCCTTTTGATCTGTCGTGGGAGGTTGAGCCCCTTACTGAAGGTGCGGA
GGTACTGGAGAGTGGCGAGGTAAATGCGAATGAAGCTGCGTATCATATCC
CGAGCTGGTCGTGGGCGTCTGTGGGAAGACCGGTCGGCTATCGATTCGAC
CTTCCGTTGGAATTATGGAAATATGAGCCTGTGGCCGTCGATCAGTGCAT
CGTTGAGCGAGTTCATTGTCAACATGAGCTACTGGAGGACCCTATGAGTG
CCGTTACAGACGGCTCTATTGTTTTAACAGGCGCTTTTGCGCAAGTGAAG
CTGATTCACCTCAAGCAAACACAAGGAACCGCTCGAGAAGATCACGAAGG
CCTCATCATCGATGAAGGTGGTATCCAACGGGATACATTTGTGCAGTGCT
CCACTGGGCACAAGTTGAGAGTGACCCTCGACAAGCTGGAGGTGAACGAT
CCAGACGAATCGTATTACTGTCTCCGATTGTTTTCGTGGGTATCTAAATA
CGACCGGAGGATGGGCCCGGAGACATGGTTTCTCGTACTGGCGACATCAA
CGCGCAAACTAGGTGCTTTTGAGAGAAGGGGTGTTGGTCTGTGGAATACA
TGGCGAGGTGATGCGGGTAACATGTCTTGTCCTATTTTCGAGGGGTGTGC
AGCTGCTACAGTGGAGATTGTTTAGATGTCCTCCTGCTCCTCCGACACGG
ATCCAGATACAGATCCACACGTGGTTATGCGAGAACGAAATCATTACAAT
GGGGTCTACGATACACCCATTGCTACCTTTCTGGCAAATGCGTCTACCTG
CTTGGATTGCAATCTGGTGCTGCAAGTCATCGAGGCTGTCAAGCCAGGCT
GGGTAAAAGAGAACGCGCATCTCGGTCTAGTTGACTACCACCGGGAGAAA
TCAGAGGATGACAAGTCTACGATAGTGCCTCAGTTTACCCTGCACCTGCA
GCAGTCGGTAGGAATGGCAGGTGTTAACTTGCACCAGCCTACTTCCTTCC
ACTTTTTCAAACGTGCTGCCACTGCACGCTACGAGCCGCATCATGTCGAT
TCGCATGCTGGCAAAAGCCCTGAATTCACCGGGAATTTTCTCGCTCAGTC
CCTCGAAGTGACGCATGATTCAGGCTCACCAGCAGCCTTTGAACGAGCTC
ATCAATGGCTATCATACTGTGACGAGCATGACGGAGCCTGTAAGCCTCCA
AATCCTGGATACAAGCCGCGGCGCCTTATCAATGTCGGCTCGTCGGATGG
GACCCGCCATCCATTCCTCTTCGAACCTGCCGAGCCTGCCCGCTACGCAT
GTCTCAGCTACTGTTGGGCTATCGAACTCTCCACCTTACCACTAGCCCTT
CAAGACGCCATCACTGTCTGCCGAAACCTCGAGATACCCAATCTATGGGT
CGACTCTCTGTGCATCGTCCAAGATGACCGACTTGCCTGGTTACACGATG
CATCAGCAATGCACGATATCTATCTCAACTCTTATCTAACCATCTCAGTC
AAGGAACCCAACTCATGCAAGTTGGGATTCCTCGGCAAACAGCGCTTCGG
TGAGCCTACCTGGCAACAACTCCTTCGTCTCACCCGCCCAGACAACGCCC
CCGGCTTAGACCTGTTAATACGCCCAGGGGAGTTCTACCCCAGATCGTAT
CGAGACCGATCATCTCTCGACAGAAGGGGATGGTGTCTACAAGAGTCCAT
CCTACCCAACCGCAGACTCTGTTACGACGGCAACGAAATGATCTGGGAGT
GTCTCTGTCGCCAGCTCTGTGAATGCGGACATGCAGTGGCACCCCAAGTA
CCACACCTCACGACCCTGGATTACGGCAAGCTCGGAGCTTCCATCAAAAC
CGAGATCCTGAAGGGGAAAATCCGCTCTAAGAGACAAGGCTACTCAGAGT
GGCACCAGTTTTCGCTGGGCTCACGATCATGGCTTGAGCCTCATCAGGAG
ATATACCAGAGATGGAGAGACCTTGTCTCGGACTATTCGCACCGATCACT
CAGCAAGAAGCATGACCGATTACGGGCTATTTCGGGACTGGCGAGAATGG
TGGGGAATAATATGCGGCAAGGACCCGAAGCAGCAGATGAGTATCTGGCT
GGACTTTGGAAGAAAGAGCTCCCTTTTGATCTGTCGTGGGAGGTTGAGCC
CCTTACTGAAGGTGCGGAGGTACTGGAGAGTGGCGAGGTAAATGCGAATG
AAGCTGCGTATCATATCCCGAGCTGGTCGTGGGCGTCTGTGGGAAGACCG
GTCGGCTATCGATTCGACCTTCCGTTGGAATTATGGAAATATGAGCCTGT
GGCCGTCGATCAGTGCATCGTTGAGCGAGTTCATTGTCAACATGAGCTAC
TGGAGGACCCTATGAGTGCCGTTACAGACGGCTCTATTGTTTTAACAGGC
GCTTTTGCGCAAGTGAAGCTGATTCACCTCAAGCAAACACAAGGAACCGC
TCGAGAAGATCACGAAGGCCTCATCATCGATGAAGGTGGTATCCAACGGG
ATACATTTGTGCAGTGCTCCACTGGGCACAAGTTGAGAGTGACCCTCGAC
AAGCTGGAGGTGAACGATCCAGACGAATCGTATTACTGTCTCCGATTGTT
TTCGTGGGTATCTAAATACGACCGGAGGATGGGCCCGGAGACATGGTTTC
TCGTACTGGCGACATCAACGCGCAAACTAGGTGCTTTTGAGAGAAGGGGT
GTTGGTCTGTGGAATACATGGCGAGGTGATGCGGGTAACATGTCTTGTCC
TATTTTCGAGGGGTGTGCAGCTGCTACAGTGGAGATTGTTTAGATGTCCT
CCTGCTCCTCCGACACGGATCCAGATACAGATCCACACGTGGTTATGCGA
GAACGAAATCATTACAATGGGGTCTACGATACACCCATTGCTACCTTTCT
GGCAAATGCGTCTACCTGCTTGGATTGCAATCTGGTGCTGCAAGTCATCG
AGGCTGTCAAGCCAGGCTGGGTAAAAGAGAACGCGCATCTCGGTCTAGTT
GACTACCACCGGGAGAAATCAGAGGATGACAAGTCTACGATAGTGCCTCA
GTTTACCCTGCACCTGCAGCAGTCGGTAGGAATGGCAGGTGTTAACTTGC
ACCAGCCTACTTCCTTCCACTTTTTCAAACGTGCTGCCACTGCACGCTAC
GAGCCGCATCATGTCGATTCGCATGCTGGCAAAAGCCCTGAATTCACCGG
GAATTTTCTCGCTCAGTCCCTCGAAGTGACGCATGATTCAGGCTCACCAG
CAGCCTTTGAACGAGCTCATCAATGGCTATCATACTGTGACGAGCATGAC
GGAGCCTGTAAGCCTCCAAATCCTGGATACAAGCCGCGGCGCCTTATCAA
TGTCGGCTCGTCGGATGGGACCCGCCATCCATTCCTCTTCGAACCTGCCG
AGCCTGCCCGCTACGCATGTCTCAGCTACTGTTGGG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002141-T1.utr3p1 | KJC3_002141-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
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| DBxref | InterPro:IPR010730 |
| DBxref | PFAM:PF06985 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:1792133..1796158 - |
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