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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:1850536..1851917+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_002165-T1 ID=KJC3_002165-T1|Name=KJC3_002165-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1382bp|location=Sequence derived from alignment at ch2:1850536..1851917+ (Aspergillus niger KJC3)
ATGCTCCAGTTCCTGGATAAGCAGACTCTAAGCTACGCATCCTTGCTGGG
AATTCTGGAAGATGTCCACCTGGTTGACCGCCAATTCTCGTGGACCGCGT
CCATCTTCTACTTTGGCTTCATCTTCTGGTCCTATCCGACGGTGTATCTT
TCGGTCCGATTGCCGCTTGGAAAGTACCTCGGCTGTACTGTGTAGGTGAC
CCTCATCCAACCTCAACCTCAGCTTGTAGAATGTATGCTAACCACTCCCC
GGACGTCCTTTTCAGAATTCTATGGGCGGCCGTCCTCATGTGTCATGCCG
CATGCCGCAGCTTCGCTAGCATCATGGTCACCCGGTTCTTTCTCGGTGCG
TTGGAAGCGTCCATCGCTCCCGGGTTCTCGCTTATTACAGGGAAATGGTA
TACGCGCGAAGAGCAGCCCCTCCGCTACGGGCTCTGGTTCGCCGGATCTG
CCGTGGCGAGTCTCTTCGGCGGCTTAATCGCCTACGGGATTGGGCACCTC
AACGGTGCTCTTGCCCACTGGCAATACCTGTTTATCATATTTGGTGCAAT
CACTGCTTTCTGGGGTACGGTGATGCTTGTTCTTCTTCCTGACAGCACCA
ACAACGCCCTGTGGTTGCGAAAGGTCGAGAGACACATCGCAGCTCACCGT
GTGTTGGAACCTTCGCAGGAAGCCCGGGGTGGCGGGGGCTACAAACCCTA
CCAAGTAGTGGAAGCTTTCAAGGACCCGGTTACTTGGTGCCTATCTCTGT
ACTCATTCAGCGTCAATATCGCGAACGGCGGGTTGACCTCATTCGGCTCT
CTTGTGATCCAGGGATTTGGCTATGAAGGGATACAAGCCCTACTCATCCA
GATGCCGACCGGTGCATCTCAGTTGGGCTTTATTATTGTCGGCGCCGTCA
TATGCTCGTCCTTCCGAAACATGCGTCTCATCGTCATCTTCTCTTTCGCG
GTTATTAGCATGATTGGCATGGTGTTGATGTATGCACTCGACGAGAAGAA
CCAATCCGGCCGATTGGCCGGTTTCTGTCTCAGTCTTGCCTTTTCGGCGA
GCATGCCCATTTCTTTGTCGCTGGTGACGAGCAACGTGGGTGGGATGACC
AAGAAGGCCACCGTCAATGCGTGTGTGCTGGTGATGTATTGTGCGGGGAA
CGTCGTCGGCCCCCAATTCTTCAACATCGACGATGCACCGAACTATCCCA
AAGGCATCCGGGCCAGTCTGGCTGGGTTCTGTCTGGGGGCGTTTTTCATT
GCAGTGCTGCGGCTCTACCTGATGTGGGCGAACGCACGTCGTGGCCGGCA
GACGAATGGCGACGAGCGCATAGTATCCGACCATGAGGATAAGACGGACT
GGGAGATTCCTTCTTTTCGATATGTTTTGTGA back to topCoding sequence (CDS) from alignment at ch2:1850536..1851917+ >KJC3_002165-T1 ID=KJC3_002165-T1|Name=KJC3_002165-T1|organism=Aspergillus niger KJC3|type=CDS|length=2616bp|location=Sequence derived from alignment at ch2:1850536..1851917+ (Aspergillus niger KJC3)
ATGCTCCAGTTCCTGGATAAGCAGACTCTAAGCTACGCATCCTTGCTGGG
AATTCTGGAAGATGTCCACCTGGTTGACCGCCAATTCTCGTGGACCGCGT
CCATCTTCTACTTTGGCTTCATCTTCTGGTCCTATCCGACGGTGTATCTT
TCGGTCCGATTGCCGCTTGGAAAGTACCTCGGCTGTACTGTAATTCTATG
GGCGGCCGTCCTCATGTGTCATGCCGCATGCCGCAGCTTCGCTAGCATCA
TGGTCACCCGGTTCTTTCTCGGTGCGTTGGAAGCGTCCATCGCTCCCGGG
TTCTCGCTTATTACAGGGAAATGGTATACGCGCGAAGAGCAGCCCCTCCG
CTACGGGCTCTGGTTCGCCGGATCTGCCGTGGCGAGTCTCTTCGGCGGCT
TAATCGCCTACGGGATTGGGCACCTCAACGGTGCTCTTGCCCACTGGCAA
TACCTGTTTATCATATTTGGTGCAATCACTGCTTTCTGGGGTACGGTGAT
GCTTGTTCTTCTTCCTGACAGCACCAACAACGCCCTGTGGTTGCGAAAGG
TCGAGAGACACATCGCAGCTCACCGTGTGTTGGAACCTTCGCAGGAAGCC
CGGGGTGGCGGGGGCTACAAACCCTACCAAGTAGTGGAAGCTTTCAAGGA
CCCGGTTACTTGGTGCCTATCTCTGTACTCATTCAGCGTCAATATCGCGA
ACGGCGGGTTGACCTCATTCGGCTCTCTTGTGATCCAGGGATTTGGCTAT
GAAGGGATACAAGCCCTACTCATCCAGATGCCGACCGGTGCATCTCAGTT
GGGCTTTATTATTGTCGGCGCCGTCATATGCTCGTCCTTCCGAAACATGC
GTCTCATCGTCATCTTCTCTTTCGCGGTTATTAGCATGATTGGCATGGTG
TTGATGTATGCACTCGACGAGAAGAACCAATCCGGCCGATTGGCCGGTTT
CTGTCTCAGTCTTGCCTTTTCGGCGAGCATGCCCATTTCTTTGTCGCTGG
TGACGAGCAACGTGGGTGGGATGACCAAGAAGGCCACCGTCAATGCGTGT
GTGCTGGTGATGTATTGTGCGGGGAACGTCGTCGGCCCCCAATTCTTCAA
CATCGACGATGCACCGAACTATCCCAAAGGCATCCGGGCCAGTCTGGCTG
GGTTCTGTCTGGGGGCGTTTTTCATTGCAGTGCTGCGGCTCTACCTGATG
TGGGCGAACGCACGTCGTGGCCGGCAGACGAATGGCGACGAGCGCATAGT
ATCCGACCATGAGGATAAGACGGACTGGGAGATTCCTTCTTTTCGATATG
TTTTGTGAATGCTCCAGTTCCTGGATAAGCAGACTCTAAGCTACGCATCC
TTGCTGGGAATTCTGGAAGATGTCCACCTGGTTGACCGCCAATTCTCGTG
GACCGCGTCCATCTTCTACTTTGGCTTCATCTTCTGGTCCTATCCGACGG
TGTATCTTTCGGTCCGATTGCCGCTTGGAAAGTACCTCGGCTGTACTGTA
ATTCTATGGGCGGCCGTCCTCATGTGTCATGCCGCATGCCGCAGCTTCGC
TAGCATCATGGTCACCCGGTTCTTTCTCGGTGCGTTGGAAGCGTCCATCG
CTCCCGGGTTCTCGCTTATTACAGGGAAATGGTATACGCGCGAAGAGCAG
CCCCTCCGCTACGGGCTCTGGTTCGCCGGATCTGCCGTGGCGAGTCTCTT
CGGCGGCTTAATCGCCTACGGGATTGGGCACCTCAACGGTGCTCTTGCCC
ACTGGCAATACCTGTTTATCATATTTGGTGCAATCACTGCTTTCTGGGGT
ACGGTGATGCTTGTTCTTCTTCCTGACAGCACCAACAACGCCCTGTGGTT
GCGAAAGGTCGAGAGACACATCGCAGCTCACCGTGTGTTGGAACCTTCGC
AGGAAGCCCGGGGTGGCGGGGGCTACAAACCCTACCAAGTAGTGGAAGCT
TTCAAGGACCCGGTTACTTGGTGCCTATCTCTGTACTCATTCAGCGTCAA
TATCGCGAACGGCGGGTTGACCTCATTCGGCTCTCTTGTGATCCAGGGAT
TTGGCTATGAAGGGATACAAGCCCTACTCATCCAGATGCCGACCGGTGCA
TCTCAGTTGGGCTTTATTATTGTCGGCGCCGTCATATGCTCGTCCTTCCG
AAACATGCGTCTCATCGTCATCTTCTCTTTCGCGGTTATTAGCATGATTG
GCATGGTGTTGATGTATGCACTCGACGAGAAGAACCAATCCGGCCGATTG
GCCGGTTTCTGTCTCAGTCTTGCCTTTTCGGCGAGCATGCCCATTTCTTT
GTCGCTGGTGACGAGCAACGTGGGTGGGATGACCAAGAAGGCCACCGTCA
ATGCGTGTGTGCTGGTGATGTATTGTGCGGGGAACGTCGTCGGCCCCCAA
TTCTTCAACATCGACGATGCACCGAACTATCCCAAAGGCATCCGGGCCAG
TCTGGCTGGGTTCTGTCTGGGGGCGTTTTTCATTGCAGTGCTGCGGCTCT
ACCTGATGTGGGCGAACGCACGTCGTGGCCGGCAGACGAATGGCGACGAG
CGCATAGTATCCGACCATGAGGATAAGACGGACTGGGAGATTCCTTCTTT
TCGATATGTTTTGTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0022857 | transmembrane transporter activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036259 |
| DBxref | InterPro:IPR011701 |
| DBxref | PFAM:PF07690 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:1850536..1851917 + |
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