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KJC3_002169-T1, KJC3_002169-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_002169-T1
Unique NameKJC3_002169-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:1858813..1859920-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_002169-T1 ID=KJC3_002169-T1|Name=KJC3_002169-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1108bp|location=Sequence derived from alignment at ch2:1858813..1859920- (Aspergillus niger KJC3)
AGCCGACTCGGGGCAATCCAAATCGCGTCGATTCTTGCCCGTCTTTAGGG
GAATTGGTGTGGTTACAGGCACAATAACAGTGGAGATACGTTGACTTGCT
TATTCCGCCGTGCCGAGTAGTCGGGAAAACCCACATGCTAGTCGGGAAAT
GATCCACATCAAAGTATAACCCCCAGGGGCCTTCAGGTACCAAGACCATT
ACGTTCGAGACCTCATCAGTAGCAGCTATCCAAGACATTATGGGACATAT
ATTGAAATCTGGCTCATCTTTCAGGATCAGGAATGGTGGGTGTGACTGTC
GCAGTTTGGGAGACTTACTGACTCAACAAGGGATTTTATCCCAATGCCTC
CGATCGCATTTGGGCTCGACTTTCGTGACACTTTCTGGATTTTACCTTTT
CTCTCGCCGTGCATTGTCTTCGGGAAACCCTAGGGCGGTTGGCACTCCAC
AGCAAGATCAGGGGAGCGCTCCACCAACTTCTACAGCTCTTTCGGCTGAG
AAACGACCGATGAACATGGCTGAACATGTTCTGTAAGGGAGTCAACTTGC
TTGTCACCTCAAAGAAGAGTGCGCTGACTTTCCAAGTACTACCTTTGATC
AAATAGTCAATTGGGCCCGTCAAGGATCACTGTGGCCTCTCAGTTTTGGT
CTAGCGTGTTGCGCGATCGAAATGATGCACGTGTCCATGCCACGATACGA
CCAAGATCGTCTGGGTATCATTTTTAGAGCCTCTCCTCGACAATCCGATG
TGATGATTGTGGCTGGAACAGTGACAAATAAGATGGCTCCAGCTCTAAGG
CAGTGCTATGATCAGATGCCTGAGCCTAGATGGGTCATTAGCATGGGCAG
CTGTGCTAATGGTGGAGGGTACTACCATTATAGTTATAGTATCGTTCGGG
GTGTGGATCGCATTGTCCCCGTGGACGTTTATATCCCTGGCTGTCCTCCT
ACCGCGGAAGCAACCCTCTATGGGGTATTCCAACTACAAAAGAAGATAAA
AAGGACCCGGGTTACGCGGATGTGGTATCGAAGGTGATTGGTGTTCATCG
ACAAACTGTTCCCACAAATACATTTTGGCCATCGATTTTTGTTTACTGTC
CGCTGAGG
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Coding sequence (CDS) from alignment at ch2:1858813..1859920-

>KJC3_002169-T1 ID=KJC3_002169-T1|Name=KJC3_002169-T1|organism=Aspergillus niger KJC3|type=CDS|length=2097bp|location=Sequence derived from alignment at ch2:1858813..1859920- (Aspergillus niger KJC3)
TACTACCTTTGATCAAATAGTCAATTGGGCCCGTCAAGGATCACTGTGGC
CTCTCAGTTTTGGTCTAGCGTGTTGCGCGATCGAAATGATGCACGTGTCC
ATGCCACGATACGACCAAGATCGTCTGGGTATCATTTTTAGAGCCTCTCC
TCGACAATCCGATGTGATGATTGTGGCTGGAACAGTGACAAATAAGATGG
CTCCAGCTCTAAGGCAGTGCTATGATCAGATGCCTGAGCCTAGATGGGTC
ATTAGCATGGGCAGCTGTGCTAATGGTGGAGGGTACTACCATTATAGTTA
TAGTATCGTTCGGGGTGTGGATCGCATTGTCCCCGTGGACGTTTATATCC
CTGGCTGTCCTCCTACCGCGGAAGCAACCCTCTATGGGGTATTCCAACTA
CAAAAGAAGATAAAAAGGACCCGGGTTACGCGGATGTGGTATCGAAGGTG
AGGATTTTATCCCAATGCCTCCGATCGCATTTGGGCTCGACTTTCGTGAC
ACTTTCTGGATTTTACCTTTTCTCTCGCCGTGCATTGTCTTCGGGAAACC
CTAGGGCGGTTGGCACTCCACAGCAAGATCAGGGGAGCGCTCCACCAACT
TCTACAGCTCTTTCGGCTGAGAAACGACCGATGAACATGGCTGAACATGT
TCTATGGGACATATATTGAAATCTGGCTCATCTTTCAGGATCAGGAATGT
ACTACCTTTGATCAAATAGTCAATTGGGCCCGTCAAGGATCACTGTGGCC
TCTCAGTTTTGGTCTAGCGTGTTGCGCGATCGAAATGATGCACGTGTCCA
TGCCACGATACGACCAAGATCGTCTGGGTATCATTTTTAGAGCCTCTCCT
CGACAATCCGATGTGATGATTGTGGCTGGAACAGTGACAAATAAGATGGC
TCCAGCTCTAAGGCAGTGCTATGATCAGATGCCTGAGCCTAGATGGGTCA
TTAGCATGGGCAGCTGTGCTAATGGTGGAGGGTACTACCATTATAGTTAT
AGTATCGTTCGGGGTGTGGATCGCATTGTCCCCGTGGACGTTTATATCCC
TGGCTGTCCTCCTACCGCGGAAGCAACCCTCTATGGGGTATTCCAACTAC
AAAAGAAGATAAAAAGGACCCGGGTTACGCGGATGTGGTATCGAAGGTGA
GGATTTTATCCCAATGCCTCCGATCGCATTTGGGCTCGACTTTCGTGACA
CTTTCTGGATTTTACCTTTTCTCTCGCCGTGCATTGTCTTCGGGAAACCC
TAGGGCGGTTGGCACTCCACAGCAAGATCAGGGGAGCGCTCCACCAACTT
CTACAGCTCTTTCGGCTGAGAAACGACCGATGAACATGGCTGAACATGTT
CTATGGGACATATATTGAAATCTGGCTCATCTTTCAGGATCAGGAATGTA
CTACCTTTGATCAAATAGTCAATTGGGCCCGTCAAGGATCACTGTGGCCT
CTCAGTTTTGGTCTAGCGTGTTGCGCGATCGAAATGATGCACGTGTCCAT
GCCACGATACGACCAAGATCGTCTGGGTATCATTTTTAGAGCCTCTCCTC
GACAATCCGATGTGATGATTGTGGCTGGAACAGTGACAAATAAGATGGCT
CCAGCTCTAAGGCAGTGCTATGATCAGATGCCTGAGCCTAGATGGGTCAT
TAGCATGGGCAGCTGTGCTAATGGTGGAGGGTACTACCATTATAGTTATA
GTATCGTTCGGGGTGTGGATCGCATTGTCCCCGTGGACGTTTATATCCCT
GGCTGTCCTCCTACCGCGGAAGCAACCCTCTATGGGGTATTCCAACTACA
AAAGAAGATAAAAAGGACCCGGGTTACGCGGATGTGGTATCGAAGGTGAG
GATTTTATCCCAATGCCTCCGATCGCATTTGGGCTCGACTTTCGTGACAC
TTTCTGGATTTTACCTTTTCTCTCGCCGTGCATTGTCTTCGGGAAACCCT
AGGGCGGTTGGCACTCCACAGCAAGATCAGGGGAGCGCTCCACCAACTTC
TACAGCTCTTTCGGCTGAGAAACGACCGATGAACATGGCTGAACATGTTC
TATGGGACATATATTGAAATCTGGCTCATCTTTCAGGATCAGGAATG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:00515394 iron, 4 sulfur cluster binding
GO:0008137NADH dehydrogenase (ubiquinone) activity
GO:0048038quinone binding
GO:0051536iron-sulfur cluster binding
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_002169KJC3_002169Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002169-T1KJC3_002169-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002169-T1.cdsKJC3_002169-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002169-T1.utr3p1KJC3_002169-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002169-T1.exon4KJC3_002169-T1.exon4Aspergillus niger KJC3exon
KJC3_002169-T1.exon3KJC3_002169-T1.exon3Aspergillus niger KJC3exon
KJC3_002169-T1.exon2KJC3_002169-T1.exon2Aspergillus niger KJC3exon
KJC3_002169-T1.exon1KJC3_002169-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002169-T1.utr5p2KJC3_002169-T1.utr5p2Aspergillus niger KJC3five_prime_UTR
KJC3_002169-T1.utr5p1KJC3_002169-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR006138
DBxrefInterPro:IPR006137
DBxrefPFAM:PF01058
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:1858813..1859920 -
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