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KJC3_002196-T1, KJC3_002196-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_002196-T1
Unique NameKJC3_002196-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:1928968..1930360+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_002196-T1 ID=KJC3_002196-T1|Name=KJC3_002196-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1393bp|location=Sequence derived from alignment at ch2:1928968..1930360+ (Aspergillus niger KJC3)
CACTAAGGTTGGACAACACCATTTACTCATTCCTTTTTGGCCTACTGCTT
TGCCTGTTCTATTGTGGGAATTAAAACTATGGCAAGAGATGTTCAAGCAA
GACTGACATACCTCCAATGGCAACCAAGCTACACCCATACACGCCCTTCT
CGGATTGGTGTATTCTCCGGACGGAGAAAGCGCAATGCAGATCGCGATAA
GACGACTAATTTAGTCTTCCACGTGGCCGATCATCCCGAGACCATCAGAG
ATATCAGGGGACTAATTGACGCCCCTCCGTTCGATCTTGACATCAACGGT
TTCGCCTATAAAAGATGCCCCCCGCCGGCTATCACAAAGCCATATGAGTA
TTCGGATCCTCAGAAGATCAATGATATCTTCTTGCCAGAATGCGAAGCCA
TTCTGAAGGAACACGTTAACGGAGCCGATGAAGTTAAGATTTTCGATTGG
AAAGTATGCAGCAACAACTTCAAACCTATGCAACAACTGCTAAGTCTCCA
CGCTTGGTAGATCAGAAAGAAAAAGAGCGCGAAAGAGAAGCGGACAAGAA
ACCCAAATTTGCAGGGGTTTGCGCGACAGGTTCATATAGGTAAGCTACAG
TGCATCACGGCGGTGAGAGTAGGTAATGTATATGCTGACATTTCAAGACA
CACTTTTGACCCGAGATGAGATCGGAACTCCTACAATGGAGCGTATACGA
AATCATCTTCCGGAAGAATCTCAACACCTTCTTTCTGGGCGAGTCCAATT
GATAATGTGCGTACCGGGGTTCATGAGCCTAGCTTTTCTCTGCTCACAAA
CTCTACAAGAACCAACTGATCAGCTAGACTGCCGTATTGAATGGCCATTG
CTAACATAGAAAATAGCCTTTGGCGACCGATAAGTGGTCCAATAGAGGAT
CACCCCATGGCAGTATGTGATGGACAAACCATGGACGCAACCAAGTTGAT
AGAGACGGATATGATACGCGGGAACTACACCGGCACTATGCTCTATCCAC
AATATGAGGCAAATAGTGCACGTCGATGGTATTATATGAGTGAACAAGAG
ACACAAGATGTGCTTTTGTTTAAGGGGTTTGACACGAAGGAAGATAGCGT
GAAATGTGAGTGGTTGAACACCCTACCTTTCAACAGTCCATATCCTTCTC
AAGCCGGTGGCTTTGAAGGGGCGTTGGATGTACATTGGCTGACGCACTTG
CTGCAGATACTCCTCATACATCATTCAGTCCTTTGAACACACCAGAGAGT
TCATGTTCCAGGATCAGCGTGGAGGTGAGAGCACTGGTGTTTTCGCACGA
GTGATATCAATAGACCAGGCACTCCACCCCTTCGATTGCGGACAAGGCCG
GGCAAATAGATGCGTGTCTGGCTGTCTAATAAGACAGTAGGAC
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Coding sequence (CDS) from alignment at ch2:1928968..1930360+

>KJC3_002196-T1 ID=KJC3_002196-T1|Name=KJC3_002196-T1|organism=Aspergillus niger KJC3|type=CDS|length=4500bp|location=Sequence derived from alignment at ch2:1928968..1930360+ (Aspergillus niger KJC3)
ATGGCAAGAGATGTTCAAGCAAGACTGACATACCTCCAATGGCAACCAAG
CTACACCCATACACGCCCTTCTCGGATTGGTGTATTCTCCGGACGGAGAA
AGCGCAATGCAGATCGCGATAAGACGACTAATTTAGTCTTCCACGTGGCC
GATCATCCCGAGACCATCAGAGATATCAGGGGACTAATTGACGCCCCTCC
GTTCGATCTTGACATCAACGGTTTCGCCTATAAAAGATGCCCCCCGCCGG
CTATCACAAAGCCATATGAGTATTCGGATCCTCAGAAGATCAATGATATC
TTCTTGCCAGAATGCGAAGCCATTCTGAAGGAACACGTTAACGGAGCCGA
TGAAGTTAAGATTTTCGATTGGAAAATCAGAAAGAAAAAGAGCGCGAAAG
AGAAGCGGACAAGAAACCCAAATTTGCAGGGGTTTGCGCGACAGGTTCAT
ATAGACACACTTTTGACCCGAGATGAGATCGGAACTCCTACAATGGAGCG
TATACGAAATCATCTTCCGGAAGAATCTCAACACCTTCTTTCTGGGCGAG
TCCAATTGATAATCCTTTGGCGACCGATAAGTGGTCCAATAGAGGATCAC
CCCATGGCAGTATGTGATGGACAAACCATGGACGCAACCAAGTTGATAGA
GACGGATATGATACGCGGGAACTACACCGGCACTATGCTCTATCCACAAT
ATGAGGCAAATAGTGCACGTCGATGGTATTATATGAGTGAACAAGAGACA
CAAGATGTGCTTTTGTTTAAGGGGTTTGACACGAAGGAAGATAGCGTGAA
ATATACTCCTCATACATCATTCAGTCCTTTGAACACACCAGAGAGTTCAT
GTTCCAGGATCAGCGTGGAGGTGAGAGCACTGGTGTTTTCGCACGAGTGA
ATGGCAAGAGATGTTCAAGCAAGACTGACATACCTCCAATGGCAACCAAG
CTACACCCATACACGCCCTTCTCGGATTGGTGTATTCTCCGGACGGAGAA
AGCGCAATGCAGATCGCGATAAGACGACTAATTTAGTCTTCCACGTGGCC
GATCATCCCGAGACCATCAGAGATATCAGGGGACTAATTGACGCCCCTCC
GTTCGATCTTGACATCAACGGTTTCGCCTATAAAAGATGCCCCCCGCCGG
CTATCACAAAGCCATATGAGTATTCGGATCCTCAGAAGATCAATGATATC
TTCTTGCCAGAATGCGAAGCCATTCTGAAGGAACACGTTAACGGAGCCGA
TGAAGTTAAGATTTTCGATTGGAAAATCAGAAAGAAAAAGAGCGCGAAAG
AGAAGCGGACAAGAAACCCAAATTTGCAGGGGTTTGCGCGACAGGTTCAT
ATAGACACACTTTTGACCCGAGATGAGATCGGAACTCCTACAATGGAGCG
TATACGAAATCATCTTCCGGAAGAATCTCAACACCTTCTTTCTGGGCGAG
TCCAATTGATAATCCTTTGGCGACCGATAAGTGGTCCAATAGAGGATCAC
CCCATGGCAGTATGTGATGGACAAACCATGGACGCAACCAAGTTGATAGA
GACGGATATGATACGCGGGAACTACACCGGCACTATGCTCTATCCACAAT
ATGAGGCAAATAGTGCACGTCGATGGTATTATATGAGTGAACAAGAGACA
CAAGATGTGCTTTTGTTTAAGGGGTTTGACACGAAGGAAGATAGCGTGAA
ATATACTCCTCATACATCATTCAGTCCTTTGAACACACCAGAGAGTTCAT
GTTCCAGGATCAGCGTGGAGGTGAGAGCACTGGTGTTTTCGCACGAGTGA
ATGGCAAGAGATGTTCAAGCAAGACTGACATACCTCCAATGGCAACCAAG
CTACACCCATACACGCCCTTCTCGGATTGGTGTATTCTCCGGACGGAGAA
AGCGCAATGCAGATCGCGATAAGACGACTAATTTAGTCTTCCACGTGGCC
GATCATCCCGAGACCATCAGAGATATCAGGGGACTAATTGACGCCCCTCC
GTTCGATCTTGACATCAACGGTTTCGCCTATAAAAGATGCCCCCCGCCGG
CTATCACAAAGCCATATGAGTATTCGGATCCTCAGAAGATCAATGATATC
TTCTTGCCAGAATGCGAAGCCATTCTGAAGGAACACGTTAACGGAGCCGA
TGAAGTTAAGATTTTCGATTGGAAAATCAGAAAGAAAAAGAGCGCGAAAG
AGAAGCGGACAAGAAACCCAAATTTGCAGGGGTTTGCGCGACAGGTTCAT
ATAGACACACTTTTGACCCGAGATGAGATCGGAACTCCTACAATGGAGCG
TATACGAAATCATCTTCCGGAAGAATCTCAACACCTTCTTTCTGGGCGAG
TCCAATTGATAATCCTTTGGCGACCGATAAGTGGTCCAATAGAGGATCAC
CCCATGGCAGTATGTGATGGACAAACCATGGACGCAACCAAGTTGATAGA
GACGGATATGATACGCGGGAACTACACCGGCACTATGCTCTATCCACAAT
ATGAGGCAAATAGTGCACGTCGATGGTATTATATGAGTGAACAAGAGACA
CAAGATGTGCTTTTGTTTAAGGGGTTTGACACGAAGGAAGATAGCGTGAA
ATATACTCCTCATACATCATTCAGTCCTTTGAACACACCAGAGAGTTCAT
GTTCCAGGATCAGCGTGGAGGTGAGAGCACTGGTGTTTTCGCACGAGTGA
ATGGCAAGAGATGTTCAAGCAAGACTGACATACCTCCAATGGCAACCAAG
CTACACCCATACACGCCCTTCTCGGATTGGTGTATTCTCCGGACGGAGAA
AGCGCAATGCAGATCGCGATAAGACGACTAATTTAGTCTTCCACGTGGCC
GATCATCCCGAGACCATCAGAGATATCAGGGGACTAATTGACGCCCCTCC
GTTCGATCTTGACATCAACGGTTTCGCCTATAAAAGATGCCCCCCGCCGG
CTATCACAAAGCCATATGAGTATTCGGATCCTCAGAAGATCAATGATATC
TTCTTGCCAGAATGCGAAGCCATTCTGAAGGAACACGTTAACGGAGCCGA
TGAAGTTAAGATTTTCGATTGGAAAATCAGAAAGAAAAAGAGCGCGAAAG
AGAAGCGGACAAGAAACCCAAATTTGCAGGGGTTTGCGCGACAGGTTCAT
ATAGACACACTTTTGACCCGAGATGAGATCGGAACTCCTACAATGGAGCG
TATACGAAATCATCTTCCGGAAGAATCTCAACACCTTCTTTCTGGGCGAG
TCCAATTGATAATCCTTTGGCGACCGATAAGTGGTCCAATAGAGGATCAC
CCCATGGCAGTATGTGATGGACAAACCATGGACGCAACCAAGTTGATAGA
GACGGATATGATACGCGGGAACTACACCGGCACTATGCTCTATCCACAAT
ATGAGGCAAATAGTGCACGTCGATGGTATTATATGAGTGAACAAGAGACA
CAAGATGTGCTTTTGTTTAAGGGGTTTGACACGAAGGAAGATAGCGTGAA
ATATACTCCTCATACATCATTCAGTCCTTTGAACACACCAGAGAGTTCAT
GTTCCAGGATCAGCGTGGAGGTGAGAGCACTGGTGTTTTCGCACGAGTGA
ATGGCAAGAGATGTTCAAGCAAGACTGACATACCTCCAATGGCAACCAAG
CTACACCCATACACGCCCTTCTCGGATTGGTGTATTCTCCGGACGGAGAA
AGCGCAATGCAGATCGCGATAAGACGACTAATTTAGTCTTCCACGTGGCC
GATCATCCCGAGACCATCAGAGATATCAGGGGACTAATTGACGCCCCTCC
GTTCGATCTTGACATCAACGGTTTCGCCTATAAAAGATGCCCCCCGCCGG
CTATCACAAAGCCATATGAGTATTCGGATCCTCAGAAGATCAATGATATC
TTCTTGCCAGAATGCGAAGCCATTCTGAAGGAACACGTTAACGGAGCCGA
TGAAGTTAAGATTTTCGATTGGAAAATCAGAAAGAAAAAGAGCGCGAAAG
AGAAGCGGACAAGAAACCCAAATTTGCAGGGGTTTGCGCGACAGGTTCAT
ATAGACACACTTTTGACCCGAGATGAGATCGGAACTCCTACAATGGAGCG
TATACGAAATCATCTTCCGGAAGAATCTCAACACCTTCTTTCTGGGCGAG
TCCAATTGATAATCCTTTGGCGACCGATAAGTGGTCCAATAGAGGATCAC
CCCATGGCAGTATGTGATGGACAAACCATGGACGCAACCAAGTTGATAGA
GACGGATATGATACGCGGGAACTACACCGGCACTATGCTCTATCCACAAT
ATGAGGCAAATAGTGCACGTCGATGGTATTATATGAGTGAACAAGAGACA
CAAGATGTGCTTTTGTTTAAGGGGTTTGACACGAAGGAAGATAGCGTGAA
ATATACTCCTCATACATCATTCAGTCCTTTGAACACACCAGAGAGTTCAT
GTTCCAGGATCAGCGTGGAGGTGAGAGCACTGGTGTTTTCGCACGAGTGA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_002196KJC3_002196Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002196-T1KJC3_002196-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002196-T1.utr5p1KJC3_002196-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002196-T1.exon1KJC3_002196-T1.exon1Aspergillus niger KJC3exon
KJC3_002196-T1.exon2KJC3_002196-T1.exon2Aspergillus niger KJC3exon
KJC3_002196-T1.exon3KJC3_002196-T1.exon3Aspergillus niger KJC3exon
KJC3_002196-T1.exon4KJC3_002196-T1.exon4Aspergillus niger KJC3exon
KJC3_002196-T1.exon5KJC3_002196-T1.exon5Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002196-T1.cdsKJC3_002196-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002196-T1.utr3p1KJC3_002196-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:1928968..1930360 +
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