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KJC3_002214-T1, KJC3_002214-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_002214-T1
Unique NameKJC3_002214-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:1988801..1990164+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_002214-T1 ID=KJC3_002214-T1|Name=KJC3_002214-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1364bp|location=Sequence derived from alignment at ch2:1988801..1990164+ (Aspergillus niger KJC3)
ATGGAATCGAAGGAGTCTGGACGTTCCAGTCCCCAGCAAAACCAGCATGA
TACTGTTGCTGCTGCACCAGCTCCGCCAAATGGAGGGGTCGCTGGCTGGT
CTGCTGTCTTTGCCTCCTTTCTACTCTTCGCCACTACCTATGGATACTCG
TCTGCGTTTGGGGCCTTCCAGGCGTATTATGAGTCTGACTTGTTGCGCTC
CAGTTCCCCATCACGCATCGCCTGGATAGGCACCATCCAAGGGTTCTTCA
TGATCTCCACGGGTGTTCTTGCCGGGCCACTGTTTGATCAGGGATATCTG
CACGCGCTAATGACTATCGGCTGTTTGCTGAACGTCATTGGGTTCATGAT
GCTGAGCTTATCTACAGAGTATTATCAAGTGTTCTTATCACAGGGTGTTT
GTAGCGGCATAGGCTGTGGCTTGATCTACGTACCCGCCCTGTCACTGGCT
TCCACCCTTTTCACCACACGCCGCAGCATTGCCGTCGGCCTATTGTCATC
TGGGGCCAGCATTGGTGCGTTGTCCTGATCGGCAAATACCCGCTGCCTAT
GCACTCTCACTCACCACACTTGTACCCAGGTGGAACCGTCTTTCCAATTC
TTTTTATCCGGCTGCAGCCACTGATCGGGTTTCCCTGGACAGCACGCACC
TTGGCCTTTATCCAGATAGCCTGCTCCTGTGTCGCCGTCCCGCTGCTGAT
AGCCACGACCAATCCAAAACCCAGTCCACCACGCCAGCTCATCCACTGGC
ATGCATTGAAGGAGTGGAGCTTCAATGCCTACGCATTTGTCAACTTTCTC
TTCTTTGTGTCCTACTTCGTCCCGCTATTCCTCCTACCTTCCTTTGCCCA
GTCCACACTGCACACTTCAGCAGACCTGAGCGTCTATATAGTTTCGATAT
TCAATGCGAGCTCCACTATCAGCCGTATTGGCTGCCCTCTGCTGGTTTCT
CGTTTCGGCCCGAGTAAGGTATTGTATACTAGCATGGCTGGTTCTGCAGT
CATCCTCTTCGGCTGGACAGGCGTTCACACAGTCGCCGGATGCATTGTCT
TTTCTGTCTTCCTCGGGATCTTCACCGGCAGCTTTATCGCCGTTACTCCG
GTATTGATGGCTCATCCGGTCATTTCGCCTACCCCATCGGTCATTGGGAC
GCGTATGGGCATGCAGTGGTTTGCTGTTAGTTTGGGCGCGTTGATTGGTG
CGCCTATTGGTGGTGCTCTCGAGGGGTACGGCGGAAGCAATGGATTCTTG
GGTATGCAACTGTTTAGTGCAATCGTGATGGCTTTGGCAGCGACAGTACT
GCTAGTGCCCATGAGGGCGATTTGGCGGTATAATCACGCCCACTACGGCA
ATGGTGTTGTCTAG
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Coding sequence (CDS) from alignment at ch2:1988801..1990164+

>KJC3_002214-T1 ID=KJC3_002214-T1|Name=KJC3_002214-T1|organism=Aspergillus niger KJC3|type=CDS|length=2598bp|location=Sequence derived from alignment at ch2:1988801..1990164+ (Aspergillus niger KJC3)
ATGGAATCGAAGGAGTCTGGACGTTCCAGTCCCCAGCAAAACCAGCATGA
TACTGTTGCTGCTGCACCAGCTCCGCCAAATGGAGGGGTCGCTGGCTGGT
CTGCTGTCTTTGCCTCCTTTCTACTCTTCGCCACTACCTATGGATACTCG
TCTGCGTTTGGGGCCTTCCAGGCGTATTATGAGTCTGACTTGTTGCGCTC
CAGTTCCCCATCACGCATCGCCTGGATAGGCACCATCCAAGGGTTCTTCA
TGATCTCCACGGGTGTTCTTGCCGGGCCACTGTTTGATCAGGGATATCTG
CACGCGCTAATGACTATCGGCTGTTTGCTGAACGTCATTGGGTTCATGAT
GCTGAGCTTATCTACAGAGTATTATCAAGTGTTCTTATCACAGGGTGTTT
GTAGCGGCATAGGCTGTGGCTTGATCTACGTACCCGCCCTGTCACTGGCT
TCCACCCTTTTCACCACACGCCGCAGCATTGCCGTCGGCCTATTGTCATC
TGGGGCCAGCATTGGTGGAACCGTCTTTCCAATTCTTTTTATCCGGCTGC
AGCCACTGATCGGGTTTCCCTGGACAGCACGCACCTTGGCCTTTATCCAG
ATAGCCTGCTCCTGTGTCGCCGTCCCGCTGCTGATAGCCACGACCAATCC
AAAACCCAGTCCACCACGCCAGCTCATCCACTGGCATGCATTGAAGGAGT
GGAGCTTCAATGCCTACGCATTTGTCAACTTTCTCTTCTTTGTGTCCTAC
TTCGTCCCGCTATTCCTCCTACCTTCCTTTGCCCAGTCCACACTGCACAC
TTCAGCAGACCTGAGCGTCTATATAGTTTCGATATTCAATGCGAGCTCCA
CTATCAGCCGTATTGGCTGCCCTCTGCTGGTTTCTCGTTTCGGCCCGAGT
AAGGTATTGTATACTAGCATGGCTGGTTCTGCAGTCATCCTCTTCGGCTG
GACAGGCGTTCACACAGTCGCCGGATGCATTGTCTTTTCTGTCTTCCTCG
GGATCTTCACCGGCAGCTTTATCGCCGTTACTCCGGTATTGATGGCTCAT
CCGGTCATTTCGCCTACCCCATCGGTCATTGGGACGCGTATGGGCATGCA
GTGGTTTGCTGTTAGTTTGGGCGCGTTGATTGGTGCGCCTATTGGTGGTG
CTCTCGAGGGGTACGGCGGAAGCAATGGATTCTTGGGTATGCAACTGTTT
AGTGCAATCGTGATGGCTTTGGCAGCGACAGTACTGCTAGTGCCCATGAG
GGCGATTTGGCGGTATAATCACGCCCACTACGGCAATGGTGTTGTCTAGA
TGGAATCGAAGGAGTCTGGACGTTCCAGTCCCCAGCAAAACCAGCATGAT
ACTGTTGCTGCTGCACCAGCTCCGCCAAATGGAGGGGTCGCTGGCTGGTC
TGCTGTCTTTGCCTCCTTTCTACTCTTCGCCACTACCTATGGATACTCGT
CTGCGTTTGGGGCCTTCCAGGCGTATTATGAGTCTGACTTGTTGCGCTCC
AGTTCCCCATCACGCATCGCCTGGATAGGCACCATCCAAGGGTTCTTCAT
GATCTCCACGGGTGTTCTTGCCGGGCCACTGTTTGATCAGGGATATCTGC
ACGCGCTAATGACTATCGGCTGTTTGCTGAACGTCATTGGGTTCATGATG
CTGAGCTTATCTACAGAGTATTATCAAGTGTTCTTATCACAGGGTGTTTG
TAGCGGCATAGGCTGTGGCTTGATCTACGTACCCGCCCTGTCACTGGCTT
CCACCCTTTTCACCACACGCCGCAGCATTGCCGTCGGCCTATTGTCATCT
GGGGCCAGCATTGGTGGAACCGTCTTTCCAATTCTTTTTATCCGGCTGCA
GCCACTGATCGGGTTTCCCTGGACAGCACGCACCTTGGCCTTTATCCAGA
TAGCCTGCTCCTGTGTCGCCGTCCCGCTGCTGATAGCCACGACCAATCCA
AAACCCAGTCCACCACGCCAGCTCATCCACTGGCATGCATTGAAGGAGTG
GAGCTTCAATGCCTACGCATTTGTCAACTTTCTCTTCTTTGTGTCCTACT
TCGTCCCGCTATTCCTCCTACCTTCCTTTGCCCAGTCCACACTGCACACT
TCAGCAGACCTGAGCGTCTATATAGTTTCGATATTCAATGCGAGCTCCAC
TATCAGCCGTATTGGCTGCCCTCTGCTGGTTTCTCGTTTCGGCCCGAGTA
AGGTATTGTATACTAGCATGGCTGGTTCTGCAGTCATCCTCTTCGGCTGG
ACAGGCGTTCACACAGTCGCCGGATGCATTGTCTTTTCTGTCTTCCTCGG
GATCTTCACCGGCAGCTTTATCGCCGTTACTCCGGTATTGATGGCTCATC
CGGTCATTTCGCCTACCCCATCGGTCATTGGGACGCGTATGGGCATGCAG
TGGTTTGCTGTTAGTTTGGGCGCGTTGATTGGTGCGCCTATTGGTGGTGC
TCTCGAGGGGTACGGCGGAAGCAATGGATTCTTGGGTATGCAACTGTTTA
GTGCAATCGTGATGGCTTTGGCAGCGACAGTACTGCTAGTGCCCATGAGG
GCGATTTGGCGGTATAATCACGCCCACTACGGCAATGGTGTTGTCTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_002214KJC3_002214Aspergillus niger KJC3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002214-T1.exon1KJC3_002214-T1.exon1Aspergillus niger KJC3exon
KJC3_002214-T1.exon2KJC3_002214-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002214-T1.cdsKJC3_002214-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002214-T1KJC3_002214-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036259
DBxrefInterPro:IPR020846
DBxrefInterPro:IPR011701
DBxrefPFAM:PF07690
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:1988801..1990164 +
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