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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:1988801..1990164+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_002214-T1 ID=KJC3_002214-T1|Name=KJC3_002214-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1364bp|location=Sequence derived from alignment at ch2:1988801..1990164+ (Aspergillus niger KJC3)
ATGGAATCGAAGGAGTCTGGACGTTCCAGTCCCCAGCAAAACCAGCATGA
TACTGTTGCTGCTGCACCAGCTCCGCCAAATGGAGGGGTCGCTGGCTGGT
CTGCTGTCTTTGCCTCCTTTCTACTCTTCGCCACTACCTATGGATACTCG
TCTGCGTTTGGGGCCTTCCAGGCGTATTATGAGTCTGACTTGTTGCGCTC
CAGTTCCCCATCACGCATCGCCTGGATAGGCACCATCCAAGGGTTCTTCA
TGATCTCCACGGGTGTTCTTGCCGGGCCACTGTTTGATCAGGGATATCTG
CACGCGCTAATGACTATCGGCTGTTTGCTGAACGTCATTGGGTTCATGAT
GCTGAGCTTATCTACAGAGTATTATCAAGTGTTCTTATCACAGGGTGTTT
GTAGCGGCATAGGCTGTGGCTTGATCTACGTACCCGCCCTGTCACTGGCT
TCCACCCTTTTCACCACACGCCGCAGCATTGCCGTCGGCCTATTGTCATC
TGGGGCCAGCATTGGTGCGTTGTCCTGATCGGCAAATACCCGCTGCCTAT
GCACTCTCACTCACCACACTTGTACCCAGGTGGAACCGTCTTTCCAATTC
TTTTTATCCGGCTGCAGCCACTGATCGGGTTTCCCTGGACAGCACGCACC
TTGGCCTTTATCCAGATAGCCTGCTCCTGTGTCGCCGTCCCGCTGCTGAT
AGCCACGACCAATCCAAAACCCAGTCCACCACGCCAGCTCATCCACTGGC
ATGCATTGAAGGAGTGGAGCTTCAATGCCTACGCATTTGTCAACTTTCTC
TTCTTTGTGTCCTACTTCGTCCCGCTATTCCTCCTACCTTCCTTTGCCCA
GTCCACACTGCACACTTCAGCAGACCTGAGCGTCTATATAGTTTCGATAT
TCAATGCGAGCTCCACTATCAGCCGTATTGGCTGCCCTCTGCTGGTTTCT
CGTTTCGGCCCGAGTAAGGTATTGTATACTAGCATGGCTGGTTCTGCAGT
CATCCTCTTCGGCTGGACAGGCGTTCACACAGTCGCCGGATGCATTGTCT
TTTCTGTCTTCCTCGGGATCTTCACCGGCAGCTTTATCGCCGTTACTCCG
GTATTGATGGCTCATCCGGTCATTTCGCCTACCCCATCGGTCATTGGGAC
GCGTATGGGCATGCAGTGGTTTGCTGTTAGTTTGGGCGCGTTGATTGGTG
CGCCTATTGGTGGTGCTCTCGAGGGGTACGGCGGAAGCAATGGATTCTTG
GGTATGCAACTGTTTAGTGCAATCGTGATGGCTTTGGCAGCGACAGTACT
GCTAGTGCCCATGAGGGCGATTTGGCGGTATAATCACGCCCACTACGGCA
ATGGTGTTGTCTAG back to topCoding sequence (CDS) from alignment at ch2:1988801..1990164+ >KJC3_002214-T1 ID=KJC3_002214-T1|Name=KJC3_002214-T1|organism=Aspergillus niger KJC3|type=CDS|length=2598bp|location=Sequence derived from alignment at ch2:1988801..1990164+ (Aspergillus niger KJC3)
ATGGAATCGAAGGAGTCTGGACGTTCCAGTCCCCAGCAAAACCAGCATGA
TACTGTTGCTGCTGCACCAGCTCCGCCAAATGGAGGGGTCGCTGGCTGGT
CTGCTGTCTTTGCCTCCTTTCTACTCTTCGCCACTACCTATGGATACTCG
TCTGCGTTTGGGGCCTTCCAGGCGTATTATGAGTCTGACTTGTTGCGCTC
CAGTTCCCCATCACGCATCGCCTGGATAGGCACCATCCAAGGGTTCTTCA
TGATCTCCACGGGTGTTCTTGCCGGGCCACTGTTTGATCAGGGATATCTG
CACGCGCTAATGACTATCGGCTGTTTGCTGAACGTCATTGGGTTCATGAT
GCTGAGCTTATCTACAGAGTATTATCAAGTGTTCTTATCACAGGGTGTTT
GTAGCGGCATAGGCTGTGGCTTGATCTACGTACCCGCCCTGTCACTGGCT
TCCACCCTTTTCACCACACGCCGCAGCATTGCCGTCGGCCTATTGTCATC
TGGGGCCAGCATTGGTGGAACCGTCTTTCCAATTCTTTTTATCCGGCTGC
AGCCACTGATCGGGTTTCCCTGGACAGCACGCACCTTGGCCTTTATCCAG
ATAGCCTGCTCCTGTGTCGCCGTCCCGCTGCTGATAGCCACGACCAATCC
AAAACCCAGTCCACCACGCCAGCTCATCCACTGGCATGCATTGAAGGAGT
GGAGCTTCAATGCCTACGCATTTGTCAACTTTCTCTTCTTTGTGTCCTAC
TTCGTCCCGCTATTCCTCCTACCTTCCTTTGCCCAGTCCACACTGCACAC
TTCAGCAGACCTGAGCGTCTATATAGTTTCGATATTCAATGCGAGCTCCA
CTATCAGCCGTATTGGCTGCCCTCTGCTGGTTTCTCGTTTCGGCCCGAGT
AAGGTATTGTATACTAGCATGGCTGGTTCTGCAGTCATCCTCTTCGGCTG
GACAGGCGTTCACACAGTCGCCGGATGCATTGTCTTTTCTGTCTTCCTCG
GGATCTTCACCGGCAGCTTTATCGCCGTTACTCCGGTATTGATGGCTCAT
CCGGTCATTTCGCCTACCCCATCGGTCATTGGGACGCGTATGGGCATGCA
GTGGTTTGCTGTTAGTTTGGGCGCGTTGATTGGTGCGCCTATTGGTGGTG
CTCTCGAGGGGTACGGCGGAAGCAATGGATTCTTGGGTATGCAACTGTTT
AGTGCAATCGTGATGGCTTTGGCAGCGACAGTACTGCTAGTGCCCATGAG
GGCGATTTGGCGGTATAATCACGCCCACTACGGCAATGGTGTTGTCTAGA
TGGAATCGAAGGAGTCTGGACGTTCCAGTCCCCAGCAAAACCAGCATGAT
ACTGTTGCTGCTGCACCAGCTCCGCCAAATGGAGGGGTCGCTGGCTGGTC
TGCTGTCTTTGCCTCCTTTCTACTCTTCGCCACTACCTATGGATACTCGT
CTGCGTTTGGGGCCTTCCAGGCGTATTATGAGTCTGACTTGTTGCGCTCC
AGTTCCCCATCACGCATCGCCTGGATAGGCACCATCCAAGGGTTCTTCAT
GATCTCCACGGGTGTTCTTGCCGGGCCACTGTTTGATCAGGGATATCTGC
ACGCGCTAATGACTATCGGCTGTTTGCTGAACGTCATTGGGTTCATGATG
CTGAGCTTATCTACAGAGTATTATCAAGTGTTCTTATCACAGGGTGTTTG
TAGCGGCATAGGCTGTGGCTTGATCTACGTACCCGCCCTGTCACTGGCTT
CCACCCTTTTCACCACACGCCGCAGCATTGCCGTCGGCCTATTGTCATCT
GGGGCCAGCATTGGTGGAACCGTCTTTCCAATTCTTTTTATCCGGCTGCA
GCCACTGATCGGGTTTCCCTGGACAGCACGCACCTTGGCCTTTATCCAGA
TAGCCTGCTCCTGTGTCGCCGTCCCGCTGCTGATAGCCACGACCAATCCA
AAACCCAGTCCACCACGCCAGCTCATCCACTGGCATGCATTGAAGGAGTG
GAGCTTCAATGCCTACGCATTTGTCAACTTTCTCTTCTTTGTGTCCTACT
TCGTCCCGCTATTCCTCCTACCTTCCTTTGCCCAGTCCACACTGCACACT
TCAGCAGACCTGAGCGTCTATATAGTTTCGATATTCAATGCGAGCTCCAC
TATCAGCCGTATTGGCTGCCCTCTGCTGGTTTCTCGTTTCGGCCCGAGTA
AGGTATTGTATACTAGCATGGCTGGTTCTGCAGTCATCCTCTTCGGCTGG
ACAGGCGTTCACACAGTCGCCGGATGCATTGTCTTTTCTGTCTTCCTCGG
GATCTTCACCGGCAGCTTTATCGCCGTTACTCCGGTATTGATGGCTCATC
CGGTCATTTCGCCTACCCCATCGGTCATTGGGACGCGTATGGGCATGCAG
TGGTTTGCTGTTAGTTTGGGCGCGTTGATTGGTGCGCCTATTGGTGGTGC
TCTCGAGGGGTACGGCGGAAGCAATGGATTCTTGGGTATGCAACTGTTTA
GTGCAATCGTGATGGCTTTGGCAGCGACAGTACTGCTAGTGCCCATGAGG
GCGATTTGGCGGTATAATCACGCCCACTACGGCAATGGTGTTGTCTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0022857 | transmembrane transporter activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036259 |
| DBxref | InterPro:IPR020846 |
| DBxref | InterPro:IPR011701 |
| DBxref | PFAM:PF07690 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:1988801..1990164 + |
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