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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:2032166..2034261+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_002233-T1 ID=KJC3_002233-T1|Name=KJC3_002233-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2096bp|location=Sequence derived from alignment at ch2:2032166..2034261+ (Aspergillus niger KJC3)
CAGAAACGGATATTCTGACGTCCGGCCAATAAGGACCGGTCAGGATCATG
AGTTGTCGCCTCAGTCTCACTGCCACAACCAGATCATGGCCATCTTTCTG
CTACGAGGCTGAGCAATTCGCTATATATAAAGCCGTCAAATTCTGCAAGA
ATAGGATTCATTTTCCCACCCAGACTCGTTCACAGCAATGCATTTTTCTC
ATTCTTCTCTTCTTCTCGGGGCAATATGCGCATGGGGCCTTGCCAGCCCT
TTGCCCTCAAGTACAAGTCCTACGGTGCATCTCCCTGATTCCAATGTCTG
GTTCAAGGGAACGGCAGGCAACTTGACCGAATCCTTCCTCAATATCCGCT
TTGGTGAAGACACGAGCGGGAGCAACCGCTTTGCTCCTCCGAAACCATAC
AACTATCCCTCCGGCTCCGTGGTGAATGCCACCCAGTCCGGCGCAGCTTG
TCCTCAGCAAAAGGACCCTATTCCTGACTTTCCCATCTTCGACAATGTCA
CTTCCATCTCTGAGGACTGTCTGACGCTGCGCGTTGATCGGCCACTCAAC
ACGTCTTCCTCGGACCGTCTACCAGTCCTCGTCTGGATCTACGGCGGCGG
CGACACCATCGGCCAAATCTATGACTCTGCCTATGATCCAAGCCTTTTGG
TCTACGGAGCTGCCCAGAAAGATGTTCCCGTTATCTACGTGGCTATGAAC
TACCGTCTCGGTATCTTCGGATTTGCCTCATCCCCCGCCTTGAACGATTC
CGACTCCCTGAATGCCGGTCTGCTGGACCAGCGCTTAGCCCTATGGTGGA
TCCAAGACAATATTGCAGCCTTCGGCGGTGATCCAGACCAGGTCACCATC
TTCGGCGAAAGTGATGGTGCAACAAGCGTCGGACTTCATATCACTGCCTA
TGGCGGCAAAGAGTCCAAAGTGCCCTTCCATCGCGCAATTATGGAATCAG
GCGGCGCCACTGCCGACTCCGGAACGGCCAGCAACAAGTCAGGCGAGCAC
ACAGCTACCCTAACCAGCCTCGTCAACTGCACTGCGTCCTCCAGCCAGGA
GGAGCTCGAGTGTCTTCGTCGTCTCCCCATGAAGACCCTCCTCAACACAG
CGTACGCCTACGAGCTCACTCTCAACTCCATGGGCGGCATGGGCGTTTTC
ATCCCCGCAGCCCCCTCACCCTTCATCCCCGATGCTCCGTCGAAACTCCT
CCGAACTGGCCAATTCTCCCGCAACATCGACCTCATCTCCGGTTGGTGCG
AGAATGATGGCTCATTCTTCACTACCACAACTCTGAACTCCTCATCCGAT
ATCGCCGCCTTCCTCCAGGACAGCTACCCCAACCTCTCCAACGCCTCTAT
CGCCAAAGCCCTGGACCTCTACCCCGTGTCAGAATTCTCCCCGGACCCAT
CCGGAAACATCTCCGCGCAGTACTTCCGTGCTAGCCAGATGCACCGTGAC
CTCGACTTTACTTGTCCCAGTCTCTTGACTGTCCAGACGAACGTCAAGTA
CGCCACTGACAAATCCAAGGTTACTAACTACCTCTACGCACTCAACCAAA
CGGCCTTTGCAGAGGTCTTTGAGTACTTGGGCATGACGTACTACGGTGTT
CCGCACTTTAGTGATATTATGTATCTTTTTAACTCTGTTACGAACGGCTT
GTTCAAGGATGTATCGACAGCGTCGGATCGGAAGCTAGCGTCTGAGATGG
GTGCCAGCTGGGCTTCGTTTGCCTACTATGGTAATCCAAGCCGTGCTAGG
GGTAGTGTTAAGGGATGGGAGCAAGCGTATGCGGCGAATGCTAGTTCCAC
GACGCCTGAGTTGCAGGTCTTGGGTGGGCCGAAGATGAGGTTCACGGGTA
GTGGGAAGGGAGCTGCGTATGATGAGGATTTGGTGAAGAGGTGCGCGTTT
TGGAATGATCCGGTTGTGGCGAGTGAGTTGGGGGTGTAGATTTGAATTGG
TGATGAGGATGAGTATGGGCACATGCCGATCTTTCTTTTTTATAAGATGG
AAATGATTTATGAATCTTAGATGTAATGATTTAGACACAGACGTTATGAT
AGCTATGCAGTATACAAATATCGATCGAATGGTCGTTCTATGATCC back to topCoding sequence (CDS) from alignment at ch2:2032166..2034261+ >KJC3_002233-T1 ID=KJC3_002233-T1|Name=KJC3_002233-T1|organism=Aspergillus niger KJC3|type=CDS|length=1752bp|location=Sequence derived from alignment at ch2:2032166..2034261+ (Aspergillus niger KJC3)
ATGCATTTTTCTCATTCTTCTCTTCTTCTCGGGGCAATATGCGCATGGGG
CCTTGCCAGCCCTTTGCCCTCAAGTACAAGTCCTACGGTGCATCTCCCTG
ATTCCAATGTCTGGTTCAAGGGAACGGCAGGCAACTTGACCGAATCCTTC
CTCAATATCCGCTTTGGTGAAGACACGAGCGGGAGCAACCGCTTTGCTCC
TCCGAAACCATACAACTATCCCTCCGGCTCCGTGGTGAATGCCACCCAGT
CCGGCGCAGCTTGTCCTCAGCAAAAGGACCCTATTCCTGACTTTCCCATC
TTCGACAATGTCACTTCCATCTCTGAGGACTGTCTGACGCTGCGCGTTGA
TCGGCCACTCAACACGTCTTCCTCGGACCGTCTACCAGTCCTCGTCTGGA
TCTACGGCGGCGGCGACACCATCGGCCAAATCTATGACTCTGCCTATGAT
CCAAGCCTTTTGGTCTACGGAGCTGCCCAGAAAGATGTTCCCGTTATCTA
CGTGGCTATGAACTACCGTCTCGGTATCTTCGGATTTGCCTCATCCCCCG
CCTTGAACGATTCCGACTCCCTGAATGCCGGTCTGCTGGACCAGCGCTTA
GCCCTATGGTGGATCCAAGACAATATTGCAGCCTTCGGCGGTGATCCAGA
CCAGGTCACCATCTTCGGCGAAAGTGATGGTGCAACAAGCGTCGGACTTC
ATATCACTGCCTATGGCGGCAAAGAGTCCAAAGTGCCCTTCCATCGCGCA
ATTATGGAATCAGGCGGCGCCACTGCCGACTCCGGAACGGCCAGCAACAA
GTCAGGCGAGCACACAGCTACCCTAACCAGCCTCGTCAACTGCACTGCGT
CCTCCAGCCAGGAGGAGCTCGAGTGTCTTCGTCGTCTCCCCATGAAGACC
CTCCTCAACACAGCGTACGCCTACGAGCTCACTCTCAACTCCATGGGCGG
CATGGGCGTTTTCATCCCCGCAGCCCCCTCACCCTTCATCCCCGATGCTC
CGTCGAAACTCCTCCGAACTGGCCAATTCTCCCGCAACATCGACCTCATC
TCCGGTTGGTGCGAGAATGATGGCTCATTCTTCACTACCACAACTCTGAA
CTCCTCATCCGATATCGCCGCCTTCCTCCAGGACAGCTACCCCAACCTCT
CCAACGCCTCTATCGCCAAAGCCCTGGACCTCTACCCCGTGTCAGAATTC
TCCCCGGACCCATCCGGAAACATCTCCGCGCAGTACTTCCGTGCTAGCCA
GATGCACCGTGACCTCGACTTTACTTGTCCCAGTCTCTTGACTGTCCAGA
CGAACGTCAAGTACGCCACTGACAAATCCAAGGTTACTAACTACCTCTAC
GCACTCAACCAAACGGCCTTTGCAGAGGTCTTTGAGTACTTGGGCATGAC
GTACTACGGTGTTCCGCACTTTAGTGATATTATGTATCTTTTTAACTCTG
TTACGAACGGCTTGTTCAAGGATGTATCGACAGCGTCGGATCGGAAGCTA
GCGTCTGAGATGGGTGCCAGCTGGGCTTCGTTTGCCTACTATGGTAATCC
AAGCCGTGCTAGGGGTAGTGTTAAGGGATGGGAGCAAGCGTATGCGGCGA
ATGCTAGTTCCACGACGCCTGAGTTGCAGGTCTTGGGTGGGCCGAAGATG
AGGTTCACGGGTAGTGGGAAGGGAGCTGCGTATGATGAGGATTTGGTGAA
GAGGTGCGCGTTTTGGAATGATCCGGTTGTGGCGAGTGAGTTGGGGGTGT
AG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002233-T1.utr5p1 | KJC3_002233-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002233-T1.utr3p1 | KJC3_002233-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | SECRETED:SignalP(1-19) |
| Note | MEROPS:MER0033188 |
| DBxref | InterPro:IPR029058 |
| DBxref | InterPro:IPR002018 |
| DBxref | PFAM:PF00135 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:2032166..2034261 + |
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