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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:2037258..2038953+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_002235-T1 ID=KJC3_002235-T1|Name=KJC3_002235-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1696bp|location=Sequence derived from alignment at ch2:2037258..2038953+ (Aspergillus niger KJC3)
GATGCTGATCCAGCCAAAGAGCTTCCGATCGATCAACCGACTCGTCATAC
AGCCTAGTCGGAAATACATGTCCCACTTTCGCGTCATCGAGCACACAGCT
CGGTGTCAAAATGTCCGACAGCGTCCGGGTGCCGTGAAAGCCGGACACGA
AAGCGAGCTACGACTTGCCGTTAAGCAGTACATTCCCATCGATAATCCTC
ACCCGAAGGAAGGCGATGTCACTATAATTGGGGCGCATGCAAATGCCTTT
CCAAAGGTGACTCAACTCCATAGCACTTTACGCACGATATGTACTGAACC
ATGTATAGGAGCTTTACGAGCCCCTCTGGGATGATATTCACGAGCAGCTG
GCAAGTCAGAATAGACGCATCCGGTCGATTTGGATTGCAGATGTTGCCCA
ACAGGGGCAGAGTGGTATCTCGAATGAATTGATTCTAGGCCATGATCGTG
AGTTGTCACCTCGGACAGTACAAGCGATTGAAACGTTCATTGACACCATT
CTAGCCGACTGGCTCGACCACGGACGTGATCTTCTTTTCATGATAAATCA
ATTCCAGGACCAGATTCCTCAACCGCTCGTTGGGATTGGTCACAGCATGG
GCGGGATGCAGCTGTGAGCATCATCTTATCTCCTCATAAGACCCCCTCCT
AATTCATGGAATTTACAGAGCCCATCTCTCCTTGATGCACCCATCTCTTT
TCGAAGGTCTCATCCTCCTCGACCCAGTAATACAGCGCGAGAACCCAGGC
CGCAAATTCGCCCAGGCATCTACATACAGACGAGACCTATGGGCCTCGCG
CGAGCAAGCAGCAGCGAAATTCAAATCGAATCCATTCTACCGGGCGTGGG
ATCCCCGCGTGTTCGAGAGGTGGATCCAATACGGGCTTCGAGACCTTCCG
ACCCCATTACACCCAAACACAGATGACATTGGGCCATCCGCCGTTACGTT
GACTACAACCAAGGCCCAGGAGTTATTCTACTTCGTACGGCCTTCCTATG
TCGACGAGCGATCCGGGCTTCCCCGCGGTAACCCTGAAAAGGAAATGCAT
CCGGATGACCACGATGCTGATTATCCCTTTTATCGACCTGAATCTGCATG
GATGTTTCGTCGACTGCCCCATTTGAAGCCACCTATTCTCTATCTGTTTG
GGGAACGGTCGGATCTGTCTTCTCCGGCTGCCCGTCAAGAGAAAGTGGCG
ACAACCGGTACGGGTCTGGGTGGTAGTGGGGGCGCAGCGCGTGGACTTGT
TGAGGAAGTTGTGTTACCATGTGGCCATATGGTTCCCATGGAGCTGGTCC
GGGAAAGTGCTGAAGCTAGTGCGGCGTTTATTGACAAGAGGTTATCGGAC
TGGGAGTCGAGGGTTTCGACGTTTCGCAGGGCGTGGGAGCGGGTGCCGCA
TCAGGAACGGCTGAGCGTTGATCAGCAGTGGGAGAGGCATATTAATGGCT
CTTCTAAGGGATCTAAGCTTTGAGGAATTGATGGTTTGCTTTTGCTCTTT
GGGAACAGGACTTAGTGAGGGCTACTGGTCTGACCCTCTACTCCGGTGAG
GCCGCGGTTAGTTGCGGAAACCGAGGCAGGGCGTATGCCGGTGTCACTGG
CGGGCGCGAAACCCTGGAAACACTCCCGAGGTTCCCAGCTAATTCAAACT
TACTGGCTAATTGGTAACGCCCAACAATTATCAATTATGGTAGAAG back to topCoding sequence (CDS) from alignment at ch2:2037258..2038953+ >KJC3_002235-T1 ID=KJC3_002235-T1|Name=KJC3_002235-T1|organism=Aspergillus niger KJC3|type=CDS|length=5232bp|location=Sequence derived from alignment at ch2:2037258..2038953+ (Aspergillus niger KJC3)
ATGCTGATCCAGCCAAAGAGCTTCCGATCGATCAACCGACTCGTCATACA
GCCTAGTCGGAAATACATGTCCCACTTTCGCGTCATCGAGCACACAGCTC
GGTGTCAAAATGTCCGACAGCGTCCGGGTGCCGTGAAAGCCGGACACGAA
AGCGAGCTACGACTTGCCGTTAAGCAGTACATTCCCATCGATAATCCTCA
CCCGAAGGAAGGCGATGTCACTATAATTGGGGCGCATGCAAATGCCTTTC
CAAAGGAGCTTTACGAGCCCCTCTGGGATGATATTCACGAGCAGCTGGCA
AGTCAGAATAGACGCATCCGGTCGATTTGGATTGCAGATGTTGCCCAACA
GGGGCAGAGTGGTATCTCGAATGAATTGATTCTAGGCCATGATCCCGACT
GGCTCGACCACGGACGTGATCTTCTTTTCATGATAAATCAATTCCAGGAC
CAGATTCCTCAACCGCTCGTTGGGATTGGTCACAGCATGGGCGGGATGCA
GCTAGCCCATCTCTCCTTGATGCACCCATCTCTTTTCGAAGGTCTCATCC
TCCTCGACCCAGTAATACAGCGCGAGAACCCAGGCCGCAAATTCGCCCAG
GCATCTACATACAGACGAGACCTATGGGCCTCGCGCGAGCAAGCAGCAGC
GAAATTCAAATCGAATCCATTCTACCGGGCGTGGGATCCCCGCGTGTTCG
AGAGGTGGATCCAATACGGGCTTCGAGACCTTCCGACCCCATTACACCCA
AACACAGATGACATTGGGCCATCCGCCGTTACGTTGACTACAACCAAGGC
CCAGGAGTTATTCTACTTCGTACGGCCTTCCTATGTCGACGAGCGATCCG
GGCTTCCCCGCGGTAACCCTGAAAAGGAAATGCATCCGGATGACCACGAT
GCTGATTATCCCTTTTATCGACCTGAATCTGCATGGATGTTTCGTCGACT
GCCCCATTTGAAGCCACCTATTCTCTATCTGTTTGGGGAACGGTCGGATC
TGTCTTCTCCGGCTGCCCGTCAAGAGAAAGTGGCGACAACCGGTACGGGT
CTGGGTGGTAGTGGGGGCGCAGCGCGTGGACTTGTTGAGGAAGTTGTGTT
ACCATGTGGCCATATGGTTCCCATGGAGCTGGTCCGGGAAAGTGCTGAAG
CTAGTGCGGCGTTTATTGACAAGAGGTTATCGGACTGGGAGTCGAGGGTT
TCGACGTTTCGCAGGGCGTGGGAGCGGGTGCCGCATCAGGAACGGCTGAG
CGTTGATCAGCAGTGGGAGAGGCATATTAATGGCTCTTCTAAGGGATCTA
AGCTTTGAATGCTGATCCAGCCAAAGAGCTTCCGATCGATCAACCGACTC
GTCATACAGCCTAGTCGGAAATACATGTCCCACTTTCGCGTCATCGAGCA
CACAGCTCGGTGTCAAAATGTCCGACAGCGTCCGGGTGCCGTGAAAGCCG
GACACGAAAGCGAGCTACGACTTGCCGTTAAGCAGTACATTCCCATCGAT
AATCCTCACCCGAAGGAAGGCGATGTCACTATAATTGGGGCGCATGCAAA
TGCCTTTCCAAAGGAGCTTTACGAGCCCCTCTGGGATGATATTCACGAGC
AGCTGGCAAGTCAGAATAGACGCATCCGGTCGATTTGGATTGCAGATGTT
GCCCAACAGGGGCAGAGTGGTATCTCGAATGAATTGATTCTAGGCCATGA
TCCCGACTGGCTCGACCACGGACGTGATCTTCTTTTCATGATAAATCAAT
TCCAGGACCAGATTCCTCAACCGCTCGTTGGGATTGGTCACAGCATGGGC
GGGATGCAGCTAGCCCATCTCTCCTTGATGCACCCATCTCTTTTCGAAGG
TCTCATCCTCCTCGACCCAGTAATACAGCGCGAGAACCCAGGCCGCAAAT
TCGCCCAGGCATCTACATACAGACGAGACCTATGGGCCTCGCGCGAGCAA
GCAGCAGCGAAATTCAAATCGAATCCATTCTACCGGGCGTGGGATCCCCG
CGTGTTCGAGAGGTGGATCCAATACGGGCTTCGAGACCTTCCGACCCCAT
TACACCCAAACACAGATGACATTGGGCCATCCGCCGTTACGTTGACTACA
ACCAAGGCCCAGGAGTTATTCTACTTCGTACGGCCTTCCTATGTCGACGA
GCGATCCGGGCTTCCCCGCGGTAACCCTGAAAAGGAAATGCATCCGGATG
ACCACGATGCTGATTATCCCTTTTATCGACCTGAATCTGCATGGATGTTT
CGTCGACTGCCCCATTTGAAGCCACCTATTCTCTATCTGTTTGGGGAACG
GTCGGATCTGTCTTCTCCGGCTGCCCGTCAAGAGAAAGTGGCGACAACCG
GTACGGGTCTGGGTGGTAGTGGGGGCGCAGCGCGTGGACTTGTTGAGGAA
GTTGTGTTACCATGTGGCCATATGGTTCCCATGGAGCTGGTCCGGGAAAG
TGCTGAAGCTAGTGCGGCGTTTATTGACAAGAGGTTATCGGACTGGGAGT
CGAGGGTTTCGACGTTTCGCAGGGCGTGGGAGCGGGTGCCGCATCAGGAA
CGGCTGAGCGTTGATCAGCAGTGGGAGAGGCATATTAATGGCTCTTCTAA
GGGATCTAAGCTTTGAATGCTGATCCAGCCAAAGAGCTTCCGATCGATCA
ACCGACTCGTCATACAGCCTAGTCGGAAATACATGTCCCACTTTCGCGTC
ATCGAGCACACAGCTCGGTGTCAAAATGTCCGACAGCGTCCGGGTGCCGT
GAAAGCCGGACACGAAAGCGAGCTACGACTTGCCGTTAAGCAGTACATTC
CCATCGATAATCCTCACCCGAAGGAAGGCGATGTCACTATAATTGGGGCG
CATGCAAATGCCTTTCCAAAGGAGCTTTACGAGCCCCTCTGGGATGATAT
TCACGAGCAGCTGGCAAGTCAGAATAGACGCATCCGGTCGATTTGGATTG
CAGATGTTGCCCAACAGGGGCAGAGTGGTATCTCGAATGAATTGATTCTA
GGCCATGATCCCGACTGGCTCGACCACGGACGTGATCTTCTTTTCATGAT
AAATCAATTCCAGGACCAGATTCCTCAACCGCTCGTTGGGATTGGTCACA
GCATGGGCGGGATGCAGCTAGCCCATCTCTCCTTGATGCACCCATCTCTT
TTCGAAGGTCTCATCCTCCTCGACCCAGTAATACAGCGCGAGAACCCAGG
CCGCAAATTCGCCCAGGCATCTACATACAGACGAGACCTATGGGCCTCGC
GCGAGCAAGCAGCAGCGAAATTCAAATCGAATCCATTCTACCGGGCGTGG
GATCCCCGCGTGTTCGAGAGGTGGATCCAATACGGGCTTCGAGACCTTCC
GACCCCATTACACCCAAACACAGATGACATTGGGCCATCCGCCGTTACGT
TGACTACAACCAAGGCCCAGGAGTTATTCTACTTCGTACGGCCTTCCTAT
GTCGACGAGCGATCCGGGCTTCCCCGCGGTAACCCTGAAAAGGAAATGCA
TCCGGATGACCACGATGCTGATTATCCCTTTTATCGACCTGAATCTGCAT
GGATGTTTCGTCGACTGCCCCATTTGAAGCCACCTATTCTCTATCTGTTT
GGGGAACGGTCGGATCTGTCTTCTCCGGCTGCCCGTCAAGAGAAAGTGGC
GACAACCGGTACGGGTCTGGGTGGTAGTGGGGGCGCAGCGCGTGGACTTG
TTGAGGAAGTTGTGTTACCATGTGGCCATATGGTTCCCATGGAGCTGGTC
CGGGAAAGTGCTGAAGCTAGTGCGGCGTTTATTGACAAGAGGTTATCGGA
CTGGGAGTCGAGGGTTTCGACGTTTCGCAGGGCGTGGGAGCGGGTGCCGC
ATCAGGAACGGCTGAGCGTTGATCAGCAGTGGGAGAGGCATATTAATGGC
TCTTCTAAGGGATCTAAGCTTTGAATGCTGATCCAGCCAAAGAGCTTCCG
ATCGATCAACCGACTCGTCATACAGCCTAGTCGGAAATACATGTCCCACT
TTCGCGTCATCGAGCACACAGCTCGGTGTCAAAATGTCCGACAGCGTCCG
GGTGCCGTGAAAGCCGGACACGAAAGCGAGCTACGACTTGCCGTTAAGCA
GTACATTCCCATCGATAATCCTCACCCGAAGGAAGGCGATGTCACTATAA
TTGGGGCGCATGCAAATGCCTTTCCAAAGGAGCTTTACGAGCCCCTCTGG
GATGATATTCACGAGCAGCTGGCAAGTCAGAATAGACGCATCCGGTCGAT
TTGGATTGCAGATGTTGCCCAACAGGGGCAGAGTGGTATCTCGAATGAAT
TGATTCTAGGCCATGATCCCGACTGGCTCGACCACGGACGTGATCTTCTT
TTCATGATAAATCAATTCCAGGACCAGATTCCTCAACCGCTCGTTGGGAT
TGGTCACAGCATGGGCGGGATGCAGCTAGCCCATCTCTCCTTGATGCACC
CATCTCTTTTCGAAGGTCTCATCCTCCTCGACCCAGTAATACAGCGCGAG
AACCCAGGCCGCAAATTCGCCCAGGCATCTACATACAGACGAGACCTATG
GGCCTCGCGCGAGCAAGCAGCAGCGAAATTCAAATCGAATCCATTCTACC
GGGCGTGGGATCCCCGCGTGTTCGAGAGGTGGATCCAATACGGGCTTCGA
GACCTTCCGACCCCATTACACCCAAACACAGATGACATTGGGCCATCCGC
CGTTACGTTGACTACAACCAAGGCCCAGGAGTTATTCTACTTCGTACGGC
CTTCCTATGTCGACGAGCGATCCGGGCTTCCCCGCGGTAACCCTGAAAAG
GAAATGCATCCGGATGACCACGATGCTGATTATCCCTTTTATCGACCTGA
ATCTGCATGGATGTTTCGTCGACTGCCCCATTTGAAGCCACCTATTCTCT
ATCTGTTTGGGGAACGGTCGGATCTGTCTTCTCCGGCTGCCCGTCAAGAG
AAAGTGGCGACAACCGGTACGGGTCTGGGTGGTAGTGGGGGCGCAGCGCG
TGGACTTGTTGAGGAAGTTGTGTTACCATGTGGCCATATGGTTCCCATGG
AGCTGGTCCGGGAAAGTGCTGAAGCTAGTGCGGCGTTTATTGACAAGAGG
TTATCGGACTGGGAGTCGAGGGTTTCGACGTTTCGCAGGGCGTGGGAGCG
GGTGCCGCATCAGGAACGGCTGAGCGTTGATCAGCAGTGGGAGAGGCATA
TTAATGGCTCTTCTAAGGGATCTAAGCTTTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002235-T1.utr5p1 | KJC3_002235-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002235-T1.utr3p1 | KJC3_002235-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | MEROPS:MER0209971 |
| DBxref | InterPro:IPR029058 |
| DBxref | InterPro:IPR000073 |
| DBxref | PFAM:PF12697 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:2037258..2038953 + |
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