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KJC3_002258-T1, KJC3_002258-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_002258-T1
Unique NameKJC3_002258-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:2093259..2094552+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_002258-T1 ID=KJC3_002258-T1|Name=KJC3_002258-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1294bp|location=Sequence derived from alignment at ch2:2093259..2094552+ (Aspergillus niger KJC3)
CCCGGATTTATGAAACTTAATCTGCTAAAGTCCGATTTAAACCTCAACCT
TTTGGCCACCGGTTGGAAATTGGACAACTAAGATTCTGTTAGCTGTCAGC
AATTTGCATTCAATCATCTTTCCGCAGTCTGATCTCGATCTACTATCCTC
GACCGCTGAGCCATCATTCGGTCCTCCAGCATGAAGGCCCGCGTTGCTCC
TCCGCAGTCAGCAGATCCACATGTTATCTATGTCGCTGAGAAACTGCCCG
GCGATGACTGGCACGGTATATCGGATGCGAAGGAACGTAGGAGGCGCCAG
AACCGGTTGAATCAGAGAGTCCGCCGTATGTCATCGTCGAATTACTAATC
TGATTGATTCTGATGTTCGACCAGGTTATAAGGCAAGACTTGCGCAGGCT
GGTTCCATCGCCTCGAACGGACAAAGCCATCCGGTCATAACGCCTACTCG
ATCAACCTTGAATATAGAGTCAATAGGCCAGCTCCAGAGTACTCAACCTT
ATCCAGGACAAATTGTAGAGCCTGAAGTCACGACCCTCACCCGCTTACCT
GCAGGCCACAATGGCAGCGAAGATAGCAATGAAACAATAATCAGGAACAC
GACATCTCCACAGGCCGAAGTCGATGCATTATGTTCCGAGAATCCTCACA
GAGATAAAGCGAACATTCTACTTCAACGGATAGCCGAGTTCCACTCGAGC
TACCAGTTGAATTGTCCGCAAGCAGACCATCTTCTCTCCCTAACCCGGAT
GAATGTGCATCGCGCATTTGTCGCTAATATGGCTACTCTCGGTATTACAT
GGGAGTGGATGAAAGACGACTCAATATCTCCCTTCTCCCTTGGGAGGCCT
GGACATGACCTTGCTGTTCTACCCGATAGTCTACGGCCCACAGAGCTTCA
GCGCCGCAGTCCTCACCACACTTGGATTGACTTGTTTCCATGTCCTATCA
TGAGGAATAATCTGATTCGGGTAGGTGATGACTGGGATGATGAGGAGTTG
TGTACGGATATCATGGGATTCTGGGATGGTACTTCCACGGGGCCCTTTGG
GCTGATTATTTGGGGAGAGCCTTCTGACCCTAGAAGCTGGGAGATTACAG
AAGGGTTCTTGAAGAAATGGGGCCGGCTGGTACATGGTTGTGTGGATTTG
ATGTGGTCGACGAATCACTGGCGAGCGAAGCGAGGGGAAAGACCGTTGTT
CTCGATGACGAAGGTATACCGCCAGCTGGGTCAGACATAATTGCAAAGCC
AGCTTAGGAGACATAATAATTGAGGGTCAATAATTTTCAGAGGA
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Coding sequence (CDS) from alignment at ch2:2093259..2094552+

>KJC3_002258-T1 ID=KJC3_002258-T1|Name=KJC3_002258-T1|organism=Aspergillus niger KJC3|type=CDS|length=2022bp|location=Sequence derived from alignment at ch2:2093259..2094552+ (Aspergillus niger KJC3)
ATGAAGGCCCGCGTTGCTCCTCCGCAGTCAGCAGATCCACATGTTATCTA
TGTCGCTGAGAAACTGCCCGGCGATGACTGGCACGGTATATCGGATGCGA
AGGAACGTAGGAGGCGCCAGAACCGGTTGAATCAGAGAGTCCGCCGTTAT
AAGGCAAGACTTGCGCAGGCTGGTTCCATCGCCTCGAACGGACAAAGCCA
TCCGGTCATAACGCCTACTCGATCAACCTTGAATATAGAGTCAATAGGCC
AGCTCCAGAGTACTCAACCTTATCCAGGACAAATTGTAGAGCCTGAAGTC
ACGACCCTCACCCGCTTACCTGCAGGCCACAATGGCAGCGAAGATAGCAA
TGAAACAATAATCAGGAACACGACATCTCCACAGGCCGAAGTCGATGCAT
TATGTTCCGAGAATCCTCACAGAGATAAAGCGAACATTCTACTTCAACGG
ATAGCCGAGTTCCACTCGAGCTACCAGTTGAATTGTCCGCAAGCAGACCA
TCTTCTCTCCCTAACCCGGATGAATGTGCATCGCGCATTTGTCGCTAATA
TGGCTACTCTCGGTATTACATGGGAGTGGATGAAAGACGACTCAATATCT
CCCTTCTCCCTTGGGAGGCCTGGACATGACCTTGCTGTTCTACCCGATAG
TCTACGGCCCACAGAGCTTCAGCGCCGCAGTCCTCACCACACTTGGATTG
ACTTGTTTCCATGTCCTATCATGAGGAATAATCTGATTCGGGTAGGTGAT
GACTGGGATGATGAGGAGTTGTGTACGGATATCATGGGATTCTGGGATGG
TACTTCCACGGGGCCCTTTGGGCTGATTATTTGGGGAGAGCCTTCTGACC
CTAGAAGCTGGGAGATTACAGAAGGGTTCTTGAAGAAATGGGGCCGGCTG
GTACATGGTTGTGTGGATTTGATGTGGTCGACGAATCACTGGCGAGCGAA
GCGAGGGGAAAGACCGTTGTTCTCGATGACGAAGGTATACCGCCAGCTGG
GTCAGACATAAATGAAGGCCCGCGTTGCTCCTCCGCAGTCAGCAGATCCA
CATGTTATCTATGTCGCTGAGAAACTGCCCGGCGATGACTGGCACGGTAT
ATCGGATGCGAAGGAACGTAGGAGGCGCCAGAACCGGTTGAATCAGAGAG
TCCGCCGTTATAAGGCAAGACTTGCGCAGGCTGGTTCCATCGCCTCGAAC
GGACAAAGCCATCCGGTCATAACGCCTACTCGATCAACCTTGAATATAGA
GTCAATAGGCCAGCTCCAGAGTACTCAACCTTATCCAGGACAAATTGTAG
AGCCTGAAGTCACGACCCTCACCCGCTTACCTGCAGGCCACAATGGCAGC
GAAGATAGCAATGAAACAATAATCAGGAACACGACATCTCCACAGGCCGA
AGTCGATGCATTATGTTCCGAGAATCCTCACAGAGATAAAGCGAACATTC
TACTTCAACGGATAGCCGAGTTCCACTCGAGCTACCAGTTGAATTGTCCG
CAAGCAGACCATCTTCTCTCCCTAACCCGGATGAATGTGCATCGCGCATT
TGTCGCTAATATGGCTACTCTCGGTATTACATGGGAGTGGATGAAAGACG
ACTCAATATCTCCCTTCTCCCTTGGGAGGCCTGGACATGACCTTGCTGTT
CTACCCGATAGTCTACGGCCCACAGAGCTTCAGCGCCGCAGTCCTCACCA
CACTTGGATTGACTTGTTTCCATGTCCTATCATGAGGAATAATCTGATTC
GGGTAGGTGATGACTGGGATGATGAGGAGTTGTGTACGGATATCATGGGA
TTCTGGGATGGTACTTCCACGGGGCCCTTTGGGCTGATTATTTGGGGAGA
GCCTTCTGACCCTAGAAGCTGGGAGATTACAGAAGGGTTCTTGAAGAAAT
GGGGCCGGCTGGTACATGGTTGTGTGGATTTGATGTGGTCGACGAATCAC
TGGCGAGCGAAGCGAGGGGAAAGACCGTTGTTCTCGATGACGAAGGTATA
CCGCCAGCTGGGTCAGACATAA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_002258KJC3_002258Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002258-T1.utr5p1KJC3_002258-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002258-T1.exon1KJC3_002258-T1.exon1Aspergillus niger KJC3exon
KJC3_002258-T1.exon2KJC3_002258-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002258-T1.cdsKJC3_002258-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002258-T1.utr3p1KJC3_002258-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002258-T1KJC3_002258-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR021833
DBxrefPFAM:PF11905
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:2093259..2094552 +
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