You are here

Home

KJC3_002273-T1, KJC3_002273-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_002273-T1
Unique NameKJC3_002273-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:2131141..2132054-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_002273-T1 ID=KJC3_002273-T1|Name=KJC3_002273-T1|organism=Aspergillus niger KJC3|type=mRNA|length=914bp|location=Sequence derived from alignment at ch2:2131141..2132054- (Aspergillus niger KJC3)
ATGGCCTCAATTCTTCCCCGTGTTGGCTTCCGCGCCTTGACCGCTCTGCC
CAGAGCCACCCCTCTTCCCCGGGTGTCTCTCACGCAGCTCTCTCGCGTGC
AGCCCCGCGTGCAGCCCCTCACTCGCCGGTTCCTCGCAACCATTCCTCAG
GAGCAGCCTCGTCTGCGTCTTGGATCGACCGGTAGGCCAACCTTTCCAAT
TTTACCGCGCCAATTGTACACACACTAACCGGCGTAGCTCCCAACTTCAA
GGCCCTTACCACCCATGGCGAGATCGACTTCCACGAGTTCATCGGCAACA
GCTGGGCCATTCTCTTCTCCCACCCGGCTGACTTCACCCCCGTCTGCACC
ACCGAGCTGGGTGCTTTCGCTAAGATGAAGAATGAGTTTGAGAAGAGGGG
TGTCAAGATGATCGGTCTGGTGAGTGGTCTAGGAACACAATTTCGGGTCG
GCCGCTAACAGTCAATGAACCTCTAGAGCGCCAACGATCTCAGCTCCCAC
GACCAGTGGATCGATGACATCAACGAGGTTGCCAACACCAACGTTCAGTT
CCCCATCATCGCCGATGCCGACCGCAAGGTCGCCTTCCTTTACGACATGG
TTGACCAGCGCGACTTGGACAACATTGCTGAGAAGGGTATTCCGTTCACC
ATCCGCTCCGTCTTCATCATCGACCCCGAGAAGAAGATCCGTCTCACCAT
GTCGTACCCTGCCTCGACTGGCCGCAACTCGGCGGAGGTCCTGCGCGTCA
TCGACTCCCTGCAGACTGCTGACCGCAAGGGTATTGCCACTCCCATTGAC
TGGCAGGTCGGCGAGGATGTGATTGTGCCCCCGTCGGTGTCGACCGAGGA
TGCCAAGAAGAAGTTTGGCGAGGTGCGCGAGCTGAAGCCGTACCTCCGTT
ACACCAAGTACTAG
back to top

Coding sequence (CDS) from alignment at ch2:2131141..2132054-

>KJC3_002273-T1 ID=KJC3_002273-T1|Name=KJC3_002273-T1|organism=Aspergillus niger KJC3|type=CDS|length=2403bp|location=Sequence derived from alignment at ch2:2131141..2132054- (Aspergillus niger KJC3)
AGCGCCAACGATCTCAGCTCCCACGACCAGTGGATCGATGACATCAACGA
GGTTGCCAACACCAACGTTCAGTTCCCCATCATCGCCGATGCCGACCGCA
AGGTCGCCTTCCTTTACGACATGGTTGACCAGCGCGACTTGGACAACATT
GCTGAGAAGGGTATTCCGTTCACCATCCGCTCCGTCTTCATCATCGACCC
CGAGAAGAAGATCCGTCTCACCATGTCGTACCCTGCCTCGACTGGCCGCA
ACTCGGCGGAGGTCCTGCGCGTCATCGACTCCCTGCAGACTGCTGACCGC
AAGGGTATTGCCACTCCCATTGACTGGCAGGTCGGCGAGGATGTGATTGT
GCCCCCGTCGGTGTCGACCGAGGATGCCAAGAAGAAGTTTGGCGAGGTGC
GCGAGCTGAAGCCGTACCTCCGTTACACCAAGTACTAGCTCCCAACTTCA
AGGCCCTTACCACCCATGGCGAGATCGACTTCCACGAGTTCATCGGCAAC
AGCTGGGCCATTCTCTTCTCCCACCCGGCTGACTTCACCCCCGTCTGCAC
CACCGAGCTGGGTGCTTTCGCTAAGATGAAGAATGAGTTTGAGAAGAGGG
GTGTCAAGATGATCGGTCTGATGGCCTCAATTCTTCCCCGTGTTGGCTTC
CGCGCCTTGACCGCTCTGCCCAGAGCCACCCCTCTTCCCCGGGTGTCTCT
CACGCAGCTCTCTCGCGTGCAGCCCCGCGTGCAGCCCCTCACTCGCCGGT
TCCTCGCAACCATTCCTCAGGAGCAGCCTCGTCTGCGTCTTGGATCGACC
GAGCGCCAACGATCTCAGCTCCCACGACCAGTGGATCGATGACATCAACG
AGGTTGCCAACACCAACGTTCAGTTCCCCATCATCGCCGATGCCGACCGC
AAGGTCGCCTTCCTTTACGACATGGTTGACCAGCGCGACTTGGACAACAT
TGCTGAGAAGGGTATTCCGTTCACCATCCGCTCCGTCTTCATCATCGACC
CCGAGAAGAAGATCCGTCTCACCATGTCGTACCCTGCCTCGACTGGCCGC
AACTCGGCGGAGGTCCTGCGCGTCATCGACTCCCTGCAGACTGCTGACCG
CAAGGGTATTGCCACTCCCATTGACTGGCAGGTCGGCGAGGATGTGATTG
TGCCCCCGTCGGTGTCGACCGAGGATGCCAAGAAGAAGTTTGGCGAGGTG
CGCGAGCTGAAGCCGTACCTCCGTTACACCAAGTACTAGCTCCCAACTTC
AAGGCCCTTACCACCCATGGCGAGATCGACTTCCACGAGTTCATCGGCAA
CAGCTGGGCCATTCTCTTCTCCCACCCGGCTGACTTCACCCCCGTCTGCA
CCACCGAGCTGGGTGCTTTCGCTAAGATGAAGAATGAGTTTGAGAAGAGG
GGTGTCAAGATGATCGGTCTGATGGCCTCAATTCTTCCCCGTGTTGGCTT
CCGCGCCTTGACCGCTCTGCCCAGAGCCACCCCTCTTCCCCGGGTGTCTC
TCACGCAGCTCTCTCGCGTGCAGCCCCGCGTGCAGCCCCTCACTCGCCGG
TTCCTCGCAACCATTCCTCAGGAGCAGCCTCGTCTGCGTCTTGGATCGAC
CGAGCGCCAACGATCTCAGCTCCCACGACCAGTGGATCGATGACATCAAC
GAGGTTGCCAACACCAACGTTCAGTTCCCCATCATCGCCGATGCCGACCG
CAAGGTCGCCTTCCTTTACGACATGGTTGACCAGCGCGACTTGGACAACA
TTGCTGAGAAGGGTATTCCGTTCACCATCCGCTCCGTCTTCATCATCGAC
CCCGAGAAGAAGATCCGTCTCACCATGTCGTACCCTGCCTCGACTGGCCG
CAACTCGGCGGAGGTCCTGCGCGTCATCGACTCCCTGCAGACTGCTGACC
GCAAGGGTATTGCCACTCCCATTGACTGGCAGGTCGGCGAGGATGTGATT
GTGCCCCCGTCGGTGTCGACCGAGGATGCCAAGAAGAAGTTTGGCGAGGT
GCGCGAGCTGAAGCCGTACCTCCGTTACACCAAGTACTAGCTCCCAACTT
CAAGGCCCTTACCACCCATGGCGAGATCGACTTCCACGAGTTCATCGGCA
ACAGCTGGGCCATTCTCTTCTCCCACCCGGCTGACTTCACCCCCGTCTGC
ACCACCGAGCTGGGTGCTTTCGCTAAGATGAAGAATGAGTTTGAGAAGAG
GGGTGTCAAGATGATCGGTCTGATGGCCTCAATTCTTCCCCGTGTTGGCT
TCCGCGCCTTGACCGCTCTGCCCAGAGCCACCCCTCTTCCCCGGGTGTCT
CTCACGCAGCTCTCTCGCGTGCAGCCCCGCGTGCAGCCCCTCACTCGCCG
GTTCCTCGCAACCATTCCTCAGGAGCAGCCTCGTCTGCGTCTTGGATCGA
CCG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
GO:0016209antioxidant activity
GO:0051920peroxiredoxin activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
PRX1_1KJC3_002273Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002273-T1KJC3_002273-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002273-T1.cdsKJC3_002273-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002273-T1.exon3KJC3_002273-T1.exon3Aspergillus niger KJC3exon
KJC3_002273-T1.exon2KJC3_002273-T1.exon2Aspergillus niger KJC3exon
KJC3_002273-T1.exon1KJC3_002273-T1.exon1Aspergillus niger KJC3exon


Properties
Property NameValue
DBxrefInterPro:IPR013766
DBxrefInterPro:IPR024706
DBxrefInterPro:IPR000866
DBxrefInterPro:IPR036249
DBxrefInterPro:IPR019479
DBxrefPFAM:PF08534
DBxrefPFAM:PF00578
DBxrefPFAM:PF10417
Productperoxiredoxin 1
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:2131141..2132054 -
Powered by Drupal