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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:2199920..2201183+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_002295-T1 ID=KJC3_002295-T1|Name=KJC3_002295-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1264bp|location=Sequence derived from alignment at ch2:2199920..2201183+ (Aspergillus niger KJC3)
ATCTCCTTATGGCATACATGCCGCTCAAAGTTAATGCCTGAGGCAGCAAG
CCTTGAAACCCCGCGCATGTTATCTTCGTCTTACATTCCTTTACGAGCGT
TTATCAAATGCAACTCAGTTCACTTTTCCATCCCTGCCAACCAAGTCATA
TTACCGACGACTCCAGATTTTCTCACCCTACGACATAAAAAGAAGGTAAG
TGAAAAAGGCCTGGCAACTACCAAGTGTTGTCTGTGCAATTACCTACAGA
TCTGGCAATAATTAACCGGAATAGAGACAACAATAATGGGCAATAACCTA
CCAGAAGACGTGGAAGCCTATCTTAAAGAACTAGTCAAGCGTCTTACTGA
GTACCTCAAAGACCAGCTCGTCGGCGTGTACTTATTCGGTTCAGCAAGTT
ATGGTGCTTATGAGTCTGGCCTCAGCGACCTTGACGTGCAGGCTATAGTA
AAGAATCCGCTTGATACCGTTGATAAGCAGGCAGTTATAAGCTGCATCAA
CCAGGATGCATTACCTTGCCCGGCTACCAAACTTGAATTCGTGGTCTATG
CTCAAGATGCTGTGAATCCGGCCAGTCGTCATCCTTGTTTCGAACTCAAT
TTGAACACAGGACCTCATCAATCTGATTATATTTGTCTTGACCCCGCTAG
CGAGGCAAGCCATTGGTTCTTACTTGATATTGCTATGGGACGTGAACTTG
GCCGTAACTTGTACGGCCTAGATAAAACCGACGCTTTCAGCGCCTTGCCC
CGACGCTGGATCTTAGAAGCAATCACGAATTCGCTCTACTGGCACCAAGC
AAATGAATTAAACTCAGCCAACAGTGTTTTAAACGCTTGCCGAGGCTGGC
GATACATCATTACAGGAGAATTTTCTTCGAAACTAGATGGGGCCAAATGG
GCTATACAACAACAGGGTTGTCCGGACGTTGTTAACCGTGCTATTGCAGC
GCGCAAAGCAGGAGAAAGTCTTCCTACAGCCCAGGTAGTGACGCTATACG
ATATTGTTATAAAGGCCAACTTGAGGGCTTGCCCTATATATGGCAGCACT
TGAGACATCTAGATCATGGAGCAGGTGTGGCAATGAAGTTATTCAATTCT
TACACTCTCCAGGAGATCCAAGCAACTTCCTGAGCGCACGAACAGATCAG
TTGAAAAAAGACATGCAGCTTATTTCTCGCAGACGCTGTATCCTGTAACA
GGATGGTCATGATTTGTACTTAGAGTATCCAAGCTTTCGTATGAAAAAGA
ACCATAGTACCAAA back to topCoding sequence (CDS) from alignment at ch2:2199920..2201183+ >KJC3_002295-T1 ID=KJC3_002295-T1|Name=KJC3_002295-T1|organism=Aspergillus niger KJC3|type=CDS|length=768bp|location=Sequence derived from alignment at ch2:2199920..2201183+ (Aspergillus niger KJC3)
ATGGGCAATAACCTACCAGAAGACGTGGAAGCCTATCTTAAAGAACTAGT
CAAGCGTCTTACTGAGTACCTCAAAGACCAGCTCGTCGGCGTGTACTTAT
TCGGTTCAGCAAGTTATGGTGCTTATGAGTCTGGCCTCAGCGACCTTGAC
GTGCAGGCTATAGTAAAGAATCCGCTTGATACCGTTGATAAGCAGGCAGT
TATAAGCTGCATCAACCAGGATGCATTACCTTGCCCGGCTACCAAACTTG
AATTCGTGGTCTATGCTCAAGATGCTGTGAATCCGGCCAGTCGTCATCCT
TGTTTCGAACTCAATTTGAACACAGGACCTCATCAATCTGATTATATTTG
TCTTGACCCCGCTAGCGAGGCAAGCCATTGGTTCTTACTTGATATTGCTA
TGGGACGTGAACTTGGCCGTAACTTGTACGGCCTAGATAAAACCGACGCT
TTCAGCGCCTTGCCCCGACGCTGGATCTTAGAAGCAATCACGAATTCGCT
CTACTGGCACCAAGCAAATGAATTAAACTCAGCCAACAGTGTTTTAAACG
CTTGCCGAGGCTGGCGATACATCATTACAGGAGAATTTTCTTCGAAACTA
GATGGGGCCAAATGGGCTATACAACAACAGGGTTGTCCGGACGTTGTTAA
CCGTGCTATTGCAGCGCGCAAAGCAGGAGAAAGTCTTCCTACAGCCCAGG
TAGTGACGCTATACGATATTGTTATAAAGGCCAACTTGAGGGCTTGCCCT
ATATATGGCAGCACTTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0016779 | nucleotidyltransferase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002295-T1.utr3p1 | KJC3_002295-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_2.6 |
| DBxref | InterPro:IPR043519 |
| DBxref | InterPro:IPR002934 |
| DBxref | InterPro:IPR025184 |
| DBxref | PFAM:PF13427 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:2199920..2201183 + |
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