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KJC3_002323-T1, KJC3_002323-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_002323-T1
Unique NameKJC3_002323-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:2265223..2266460-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_002323-T1 ID=KJC3_002323-T1|Name=KJC3_002323-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1238bp|location=Sequence derived from alignment at ch2:2265223..2266460- (Aspergillus niger KJC3)
GGACAATTCATTACTCACTCAAGTGCCCCATTACTTCTATCCTAGACAGT
ATTTAGTAGCCAGTTTTAACTAAATATATTGTTTACCAGTCGAAGTCCCA
GCATCAGAAACAATGGGAAGGACCCTAACATACCCAAAGCGGCCGTCGAA
CACGGTCAACCGTTACAAACATCGAGGTATACTTCAGCTCATTTTACTGC
TTCGCGTTGAGGGAACTCACTAAGAACACCGCAGCAACTTATGACCTGGG
TGCCATTCATGAAATTATCAACTCCACCCAAGTTCTCCATGTTTCCTTCA
GCCCCGGACCATCGGAGCCGTTCCCGGCCATCTTGCCTATGATCGGACAG
ATGGGATCATTCGACTATCCTTCAGCTAGCATCGACGAGCCCCTTGATTG
TTATCTTCATGGCTATGTCAGCTCCCGCATCATGAACCTGGCTCGAGATG
CTGAAGGAGAAGGACTACCCATATGCGTGGCTGCTAGCAAGGTAGACGGG
CTGGTTTTGTCTCTGACACCGAACTCCCACAGCTACAACTATCGATCTGC
AATTCTTCAGGGCTATGCTAAGCTAGTGACTGACGAAGCCGAGAAGCTCT
ACGCCATGGAGCTGATCACTAATTCGGTGCTTTCGGACCGCTGGGCGCAT
ACGCGCGTCCCACCAGACCGTGCTGAAATGTCTTCGACCGTCATCCTTAA
GGTCAAATTCATGAGCGGCAGTGGTAAGATTCGAGATGGCAGTGTCTCGG
ATGAAAAGAAAGATACAGGCAGTGAAGAGGTCACGAATCGTGTTTGGACT
GGTGTTGTTCCCGTCTGGGAGACATTTGGTGAGCCTGTTCCTAGTACCGG
GAACAAGGTACCTGAAGTACCAGGCTATGTGAAGTCATTTGTTGCTGCGA
AGAACAACGAGAATCGCGCTTATGCGGAGAAGGCTGTGGGGATTGAGCTC
CCCCCAGAGGAACAACACTGATAGTTGAGGAGCGATAATGTTTAAGCGAT
GTACTCATGGATTGTATCTAGCATTTCTGCTTTATAAAGTTAGCTTATGC
TATTATAAAGGACGGCTCCTAGTTGTCCTATTGTGGGGAGAAAGTATAAA
ATGCCCAGCTTAGACCCTGCGGGGTATTGTAGCCTTGCTGCCATGTCATT
GCAACTTCTGATCTGCACAACGCAGGGATTGTCAGATACCTAAGTTGTTA
GTATTTAGCTTCTAGAAATCACTGGAATATATATTGGA
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Coding sequence (CDS) from alignment at ch2:2265223..2266460-

>KJC3_002323-T1 ID=KJC3_002323-T1|Name=KJC3_002323-T1|organism=Aspergillus niger KJC3|type=CDS|length=1602bp|location=Sequence derived from alignment at ch2:2265223..2266460- (Aspergillus niger KJC3)
CAACTTATGACCTGGGTGCCATTCATGAAATTATCAACTCCACCCAAGTT
CTCCATGTTTCCTTCAGCCCCGGACCATCGGAGCCGTTCCCGGCCATCTT
GCCTATGATCGGACAGATGGGATCATTCGACTATCCTTCAGCTAGCATCG
ACGAGCCCCTTGATTGTTATCTTCATGGCTATGTCAGCTCCCGCATCATG
AACCTGGCTCGAGATGCTGAAGGAGAAGGACTACCCATATGCGTGGCTGC
TAGCAAGGTAGACGGGCTGGTTTTGTCTCTGACACCGAACTCCCACAGCT
ACAACTATCGATCTGCAATTCTTCAGGGCTATGCTAAGCTAGTGACTGAC
GAAGCCGAGAAGCTCTACGCCATGGAGCTGATCACTAATTCGGTGCTTTC
GGACCGCTGGGCGCATACGCGCGTCCCACCAGACCGTGCTGAAATGTCTT
CGACCGTCATCCTTAAGGTCAAATTCATGAGCGGCAGTGGTAAGATTCGA
GATGGCAGTGTCTCGGATGAAAAGAAAGATACAGGCAGTGAAGAGGTCAC
GAATCGTGTTTGGACTGGTGTTGTTCCCGTCTGGGAGACATTTGGTGAGC
CTGTTCCTAGTACCGGGAACAAGGTACCTGAAGTACCAGGCTATGTGAAG
TCATTTGTTGCTGCGAAGAACAACGAGAATCGCGCTTATGCGGAGAAGGC
TGTGGGGATTGAGCTCCCCCCAGAGGAACAACACTGAATGGGAAGGACCC
TAACATACCCAAAGCGGCCGTCGAACACGGTCAACCGTTACAAACATCGA
GCAACTTATGACCTGGGTGCCATTCATGAAATTATCAACTCCACCCAAGT
TCTCCATGTTTCCTTCAGCCCCGGACCATCGGAGCCGTTCCCGGCCATCT
TGCCTATGATCGGACAGATGGGATCATTCGACTATCCTTCAGCTAGCATC
GACGAGCCCCTTGATTGTTATCTTCATGGCTATGTCAGCTCCCGCATCAT
GAACCTGGCTCGAGATGCTGAAGGAGAAGGACTACCCATATGCGTGGCTG
CTAGCAAGGTAGACGGGCTGGTTTTGTCTCTGACACCGAACTCCCACAGC
TACAACTATCGATCTGCAATTCTTCAGGGCTATGCTAAGCTAGTGACTGA
CGAAGCCGAGAAGCTCTACGCCATGGAGCTGATCACTAATTCGGTGCTTT
CGGACCGCTGGGCGCATACGCGCGTCCCACCAGACCGTGCTGAAATGTCT
TCGACCGTCATCCTTAAGGTCAAATTCATGAGCGGCAGTGGTAAGATTCG
AGATGGCAGTGTCTCGGATGAAAAGAAAGATACAGGCAGTGAAGAGGTCA
CGAATCGTGTTTGGACTGGTGTTGTTCCCGTCTGGGAGACATTTGGTGAG
CCTGTTCCTAGTACCGGGAACAAGGTACCTGAAGTACCAGGCTATGTGAA
GTCATTTGTTGCTGCGAAGAACAACGAGAATCGCGCTTATGCGGAGAAGG
CTGTGGGGATTGAGCTCCCCCCAGAGGAACAACACTGAATGGGAAGGACC
CTAACATACCCAAAGCGGCCGTCGAACACGGTCAACCGTTACAAACATCG
AG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_002323KJC3_002323Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002323-T1KJC3_002323-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002323-T1.cdsKJC3_002323-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002323-T1.utr3p1KJC3_002323-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002323-T1.exon2KJC3_002323-T1.exon2Aspergillus niger KJC3exon
KJC3_002323-T1.exon1KJC3_002323-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002323-T1.utr5p1KJC3_002323-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR012349
DBxrefInterPro:IPR024747
DBxrefPFAM:PF12900
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:2265223..2266460 -
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