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KJC3_002327-T1, KJC3_002327-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_002327-T1
Unique NameKJC3_002327-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:2275319..2276401-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_002327-T1 ID=KJC3_002327-T1|Name=KJC3_002327-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1083bp|location=Sequence derived from alignment at ch2:2275319..2276401- (Aspergillus niger KJC3)
ACACCAACGGTCTTCTGCAAACCATTCCTTTCCATTCCTTATCACCCATC
GCTGTTTTTACTCATACTACATTGTCTGCTGTTCTTTTTGCTCATTCAGC
CTCGAGCACAAGTCGCGCTACACAGCGTTAACCCCTATCGCCAGACATGG
ATTCCCCTTCGCCCCAGGGCCCCTCGGCCCAAAACTCACCCAAACCCGAC
CAGGCCAAACTCGCTCACAGGCCAGCCAATCGTAAACAATCTTCTGATTC
TTCCTCGAATACCCAAAATGCACCTATACCAGACGACAAGCACGGTGCGG
ACTTACCAATGACCATGTCCGCCTCGGTGGTGCTAACCAGCTTACCCCGC
GATGCCCACCAAGCATTGGCGGATGCTGAGGCTGTCGATAGGGGCAAAGG
CAAGTAAAACCCTCTAGTCATCATCTACTACGAGTGCTATCACGTATCCA
CTGCCTCGAATTGTTTTGAATTCTTTCTCGCTCGAAAGTCAGCTTTTCCG
AGCTCCAAACTGGCCCCTCACTTTCCTAGTAACGTCATGTGGCTTATCGG
GACAAGCCATATACTTGTCCGGAAACTAACGATGCAGCAGTTACCGTGCG
CTTTCAGCCACTGCCTTCAGCTCCCATCCTGAAGAACCGCGTGTTCAAGA
TTAGTGCCTCGCAAAAGTTCGAAACAGTCGTGAAATTTCTCAGGAAGAAG
CTGGACTGTAAAGAATCCGACTCGGTTTTCTGTTATGTCAACAGTGTATT
TGCCCCTGGGTTAGACGAAGGTGTTGGTGGGTTGTGGAGGGTAAGCCGCC
TTGATACGTGGATTCGAGCCACCCATTTACTGACAGCATTCAGTGTTTCA
AGACTGACGAGCAACTTATCGTCGCTTACTCTATGACGCCCGCTTTTGGC
TGATGGGGAGCAAAGGTCGATGTGTATTAGTGCAACAGCTGTCTTGACTA
TTTACAGGTAATCTTCCTAAACCAAATCCGCCTCACCAAGCTAACATGGA
ATGAGAATAGAAAGGCAACTGTGCACAAAAATGGTCAAAGTTTATTTGAC
AATATATAAGAATTTTGGACATGAACACGAAAT
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Coding sequence (CDS) from alignment at ch2:2275319..2276401-

>KJC3_002327-T1 ID=KJC3_002327-T1|Name=KJC3_002327-T1|organism=Aspergillus niger KJC3|type=CDS|length=1539bp|location=Sequence derived from alignment at ch2:2275319..2276401- (Aspergillus niger KJC3)
TGTTTCAAGACTGACGAGCAACTTATCGTCGCTTACTCTATGACGCCCGC
TTTTGGCTGATTACCGTGCGCTTTCAGCCACTGCCTTCAGCTCCCATCCT
GAAGAACCGCGTGTTCAAGATTAGTGCCTCGCAAAAGTTCGAAACAGTCG
TGAAATTTCTCAGGAAGAAGCTGGACTGTAAAGAATCCGACTCGGTTTTC
TGTTATGTCAACAGTGTATTTGCCCCTGGGTTAGACGAAGGTGTTGGTGG
GTTGTGGAGGATGGATTCCCCTTCGCCCCAGGGCCCCTCGGCCCAAAACT
CACCCAAACCCGACCAGGCCAAACTCGCTCACAGGCCAGCCAATCGTAAA
CAATCTTCTGATTCTTCCTCGAATACCCAAAATGCACCTATACCAGACGA
CAAGCACGGTGCGGACTTACCAATGACCATGTCCGCCTCGGTGGTGCTAA
CCAGCTTACCCCGCGATGCCCACCAAGCATTGGCGGATGCTGAGGCTGTC
GATAGGGGCAAAGTGTTTCAAGACTGACGAGCAACTTATCGTCGCTTACT
CTATGACGCCCGCTTTTGGCTGATTACCGTGCGCTTTCAGCCACTGCCTT
CAGCTCCCATCCTGAAGAACCGCGTGTTCAAGATTAGTGCCTCGCAAAAG
TTCGAAACAGTCGTGAAATTTCTCAGGAAGAAGCTGGACTGTAAAGAATC
CGACTCGGTTTTCTGTTATGTCAACAGTGTATTTGCCCCTGGGTTAGACG
AAGGTGTTGGTGGGTTGTGGAGGATGGATTCCCCTTCGCCCCAGGGCCCC
TCGGCCCAAAACTCACCCAAACCCGACCAGGCCAAACTCGCTCACAGGCC
AGCCAATCGTAAACAATCTTCTGATTCTTCCTCGAATACCCAAAATGCAC
CTATACCAGACGACAAGCACGGTGCGGACTTACCAATGACCATGTCCGCC
TCGGTGGTGCTAACCAGCTTACCCCGCGATGCCCACCAAGCATTGGCGGA
TGCTGAGGCTGTCGATAGGGGCAAAGTGTTTCAAGACTGACGAGCAACTT
ATCGTCGCTTACTCTATGACGCCCGCTTTTGGCTGATTACCGTGCGCTTT
CAGCCACTGCCTTCAGCTCCCATCCTGAAGAACCGCGTGTTCAAGATTAG
TGCCTCGCAAAAGTTCGAAACAGTCGTGAAATTTCTCAGGAAGAAGCTGG
ACTGTAAAGAATCCGACTCGGTTTTCTGTTATGTCAACAGTGTATTTGCC
CCTGGGTTAGACGAAGGTGTTGGTGGGTTGTGGAGGATGGATTCCCCTTC
GCCCCAGGGCCCCTCGGCCCAAAACTCACCCAAACCCGACCAGGCCAAAC
TCGCTCACAGGCCAGCCAATCGTAAACAATCTTCTGATTCTTCCTCGAAT
ACCCAAAATGCACCTATACCAGACGACAAGCACGGTGCGGACTTACCAAT
GACCATGTCCGCCTCGGTGGTGCTAACCAGCTTACCCCGCGATGCCCACC
AAGCATTGGCGGATGCTGAGGCTGTCGATAGGGGCAAAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Vocabulary: Biological Process
TermDefinition
GO:0000045autophagosome assembly
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATG12KJC3_002327Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002327-T1KJC3_002327-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002327-T1.cdsKJC3_002327-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002327-T1.utr3p2KJC3_002327-T1.utr3p2Aspergillus niger KJC3three_prime_UTR
KJC3_002327-T1.utr3p1KJC3_002327-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002327-T1.exon4KJC3_002327-T1.exon4Aspergillus niger KJC3exon
KJC3_002327-T1.exon3KJC3_002327-T1.exon3Aspergillus niger KJC3exon
KJC3_002327-T1.exon2KJC3_002327-T1.exon2Aspergillus niger KJC3exon
KJC3_002327-T1.exon1KJC3_002327-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002327-T1.utr5p1KJC3_002327-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG09265EKJ
DBxrefInterPro:IPR029071
DBxrefInterPro:IPR007242
DBxrefPFAM:PF04110
ProductUbiquitin-like protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:2275319..2276401 -
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