|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:2394181..2396056+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_002371-T1 ID=KJC3_002371-T1|Name=KJC3_002371-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1876bp|location=Sequence derived from alignment at ch2:2394181..2396056+ (Aspergillus niger KJC3)
ATGCTTGTTACTCCTCTGATTGCACTTCTGCCCGCCATTGCGGCGGCGCA
GGTCTCAGGGACCGTGGGGCCACGTACGAGTGCGTCTGCGAAAGCCGCAG
AGAAAGGTATAATTTATGTTGCGCAAATGCGTCGCAAGAAGCTAACCCGA
CGTGACATTGTGTAGTATGCAACGTACTTGACTACGGGGCATCCGCAAAT
TCGACCAATGATATCGGACCGCCACTCAAGGAAGCCTTCCAAGACTGCCA
AACAGGCGGACTAGGTAAGTTCTACTAGTATCTCCATGGCGGTTTAAAAG
CAGAGCAACAACAAAAACTAATGTTTGTAATTCAGTTTATATCCCGGAAG
GGAACTATCTCCTTTCGTCGTGGGTGTCACTAGTTTATGGTTCTGGTTGG
GCTTTGCAACTAGATGGCATTATTTACCGAGACAAGAATGTGTAGGAATG
CGCTTATATGAATCTGCCACTTTGTGAACACTAACAAACCGCAGCACCGA
TGGAGGAAATATGATATTCAGTTAGTTACATGCGAGACAGCCGACAATGA
TGTGAGAATTACGCTGAGATACAATCTAGTCGAACACACCAATGATATCG
AAATTTTCAGTAATAACTCTGCTGGAGCAATTCAGGGCTACGGTTATCTA
TTCCATGAGCAAGACGAATACGGGCCACGGATTCTTCGACTTAACAACGT
GACTGATTTCAGTGTGCATGACTTGATCTTGGTGGATTCACCGGCCTACT
TCCTCAACTTAGTTGAGTCATACAACGGCGAGGTGTACAACATGGTCATT
CGTGGCGCCAGTATGGGAGGGCTCGACGGAATCGATATTTCCGGAGCCAA
TTACTGGATCCATGACGTTGAGGTCACTAACGGCGACGAATGTGTGACTG
TGAAGGTAGTCCTATTTTGCACAACCCCAGAGCCAAGAGGCCTATTCCAA
AGCTTGCTGATGAACAATGCAGAGTCCATCGGCCAACGTCCGGGTAGAAA
ATGTCTTTTGCAACCACAGTGGCGGATGCGCGATGGGATCACTTGGAACG
GACACGAATATCTCTAACATTGAATACGAGAACATCTACACTTACAACTC
CACTCAGATGTACATGATCAAGTCCAATGGGGGTAATGGCACAGTTACAA
ACTGTTCTTTCAAGAACTTCATTGGATATAGCAACGCCTACATGCTAGAT
TTGGATACATACTGGGGTGATCAGAGCGATGGTGACGGTATCAAGTACGA
GAATATCGGTTTTGAAGTGTGTATCATCTGCTCCCAGTCACAGCAACGCC
CAGAATCTAATCCGAGTCTAGAATTGGAAGGGTACCAGTTCGAATGGCAT
TCAGCGAAGCCCCATCAGGATTCTTTGCCCGGACGAGAATCCATGCACGA
ATATTACCCTAACAGCCGTTGAACTGTGGACTGATGTAAGCTTCATATTG
CAATTGATGTTTATGGTGCCCGAAAACTAACCCGCTTGATACACACCCAG
ACTGGAGATTACGTCAAGCAGGTAATGAAAATCTGGTTCCGGTCCTGATT
TCAAAGCTGGAACTTATGTTCTTTTAGGAATGCTCCAGTGCCTACGGCGA
AGGCGAATGTTTGCGACAGCAAAATGGCACCCTTGCCTCATATTCTTTTA
CGACCACGATTACCTCGGTGTATGCAGCCTACCACAGCCATGATGCCCCC
TTATCACCTGTGCTAATCCTCTGCGTAGGCCTGTCACCGCGTACAGTCCG
ACGACGACGATGCCCGGCCTGATTTCGACATCCATGGATACTACGACCTC
TATTCCGATTCCGACAATTCCTACCAGCTTTTTCCCAGGTGCCTCAGCTT
ACAGCACACTTATGGCGAATATGTAA back to topCoding sequence (CDS) from alignment at ch2:2394181..2396056+ >KJC3_002371-T1 ID=KJC3_002371-T1|Name=KJC3_002371-T1|organism=Aspergillus niger KJC3|type=CDS|length=13320bp|location=Sequence derived from alignment at ch2:2394181..2396056+ (Aspergillus niger KJC3)
ATGCTTGTTACTCCTCTGATTGCACTTCTGCCCGCCATTGCGGCGGCGCA
GGTCTCAGGGACCGTGGGGCCACGTACGAGTGCGTCTGCGAAAGCCGCAG
AGAAAGTATGCAACGTACTTGACTACGGGGCATCCGCAAATTCGACCAAT
GATATCGGACCGCCACTCAAGGAAGCCTTCCAAGACTGCCAAACAGGCGG
ACTAGTTTATATCCCGGAAGGGAACTATCTCCTTTCGTCGTGGGTGTCAC
TAGTTTATGGTTCTGGTTGGGCTTTGCAACTAGATGGCATTATTTACCGA
GACAAGAATGTCACCGATGGAGGAAATATGATATTCATCGAACACACCAA
TGATATCGAAATTTTCAGTAATAACTCTGCTGGAGCAATTCAGGGCTACG
GTTATCTATTCCATGAGCAAGACGAATACGGGCCACGGATTCTTCGACTT
AACAACGTGACTGATTTCAGTGTGCATGACTTGATCTTGGTGGATTCACC
GGCCTACTTCCTCAACTTAGTTGAGTCATACAACGGCGAGGTGTACAACA
TGGTCATTCGTGGCGCCAGTATGGGAGGGCTCGACGGAATCGATATTTCC
GGAGCCAATTACTGGATCCATGACGTTGAGGTCACTAACGGCGACGAATG
TGTGACTGTGAAGAGTCCATCGGCCAACGTCCGGGTAGAAAATGTCTTTT
GCAACCACAGTGGCGGATGCGCGATGGGATCACTTGGAACGGACACGAAT
ATCTCTAACATTGAATACGAGAACATCTACACTTACAACTCCACTCAGAT
GTACATGATCAAGTCCAATGGGGGTAATGGCACAGTTACAAACTGTTCTT
TCAAGAACTTCATTGGATATAGCAACGCCTACATGCTAGATTTGGATACA
TACTGGGGTGATCAGAGCGATGGTGACGGTATCAAGTACGAGAATATCGG
TTTTGAAAATTGGAAGGGTACCAGTTCGAATGGCATTCAGCGAAGCCCCA
TCAGGATTCTTTGCCCGGACGAGAATCCATGCACGAATATTACCCTAACA
GCCGTTGAACTGTGGACTGATACTGGAGATTACGTCAAGCAGGAATGCTC
CAGTGCCTACGGCGAAGGCGAATGTTTGCGACAGCAAAATGGCACCCTTG
CCTCATATTCTTTTACGACCACGATTACCTCGGTGCCTGTCACCGCGTAC
AGTCCGACGACGACGATGCCCGGCCTGATTTCGACATCCATGGATACTAC
GACCTCTATTCCGATTCCGACAATTCCTACCAGCTTTTTCCCAGGTGCCT
CAGCTTACAGCACACTTATGGCGAATATGTAAATGCTTGTTACTCCTCTG
ATTGCACTTCTGCCCGCCATTGCGGCGGCGCAGGTCTCAGGGACCGTGGG
GCCACGTACGAGTGCGTCTGCGAAAGCCGCAGAGAAAGTATGCAACGTAC
TTGACTACGGGGCATCCGCAAATTCGACCAATGATATCGGACCGCCACTC
AAGGAAGCCTTCCAAGACTGCCAAACAGGCGGACTAGTTTATATCCCGGA
AGGGAACTATCTCCTTTCGTCGTGGGTGTCACTAGTTTATGGTTCTGGTT
GGGCTTTGCAACTAGATGGCATTATTTACCGAGACAAGAATGTCACCGAT
GGAGGAAATATGATATTCATCGAACACACCAATGATATCGAAATTTTCAG
TAATAACTCTGCTGGAGCAATTCAGGGCTACGGTTATCTATTCCATGAGC
AAGACGAATACGGGCCACGGATTCTTCGACTTAACAACGTGACTGATTTC
AGTGTGCATGACTTGATCTTGGTGGATTCACCGGCCTACTTCCTCAACTT
AGTTGAGTCATACAACGGCGAGGTGTACAACATGGTCATTCGTGGCGCCA
GTATGGGAGGGCTCGACGGAATCGATATTTCCGGAGCCAATTACTGGATC
CATGACGTTGAGGTCACTAACGGCGACGAATGTGTGACTGTGAAGAGTCC
ATCGGCCAACGTCCGGGTAGAAAATGTCTTTTGCAACCACAGTGGCGGAT
GCGCGATGGGATCACTTGGAACGGACACGAATATCTCTAACATTGAATAC
GAGAACATCTACACTTACAACTCCACTCAGATGTACATGATCAAGTCCAA
TGGGGGTAATGGCACAGTTACAAACTGTTCTTTCAAGAACTTCATTGGAT
ATAGCAACGCCTACATGCTAGATTTGGATACATACTGGGGTGATCAGAGC
GATGGTGACGGTATCAAGTACGAGAATATCGGTTTTGAAAATTGGAAGGG
TACCAGTTCGAATGGCATTCAGCGAAGCCCCATCAGGATTCTTTGCCCGG
ACGAGAATCCATGCACGAATATTACCCTAACAGCCGTTGAACTGTGGACT
GATACTGGAGATTACGTCAAGCAGGAATGCTCCAGTGCCTACGGCGAAGG
CGAATGTTTGCGACAGCAAAATGGCACCCTTGCCTCATATTCTTTTACGA
CCACGATTACCTCGGTGCCTGTCACCGCGTACAGTCCGACGACGACGATG
CCCGGCCTGATTTCGACATCCATGGATACTACGACCTCTATTCCGATTCC
GACAATTCCTACCAGCTTTTTCCCAGGTGCCTCAGCTTACAGCACACTTA
TGGCGAATATGTAAATGCTTGTTACTCCTCTGATTGCACTTCTGCCCGCC
ATTGCGGCGGCGCAGGTCTCAGGGACCGTGGGGCCACGTACGAGTGCGTC
TGCGAAAGCCGCAGAGAAAGTATGCAACGTACTTGACTACGGGGCATCCG
CAAATTCGACCAATGATATCGGACCGCCACTCAAGGAAGCCTTCCAAGAC
TGCCAAACAGGCGGACTAGTTTATATCCCGGAAGGGAACTATCTCCTTTC
GTCGTGGGTGTCACTAGTTTATGGTTCTGGTTGGGCTTTGCAACTAGATG
GCATTATTTACCGAGACAAGAATGTCACCGATGGAGGAAATATGATATTC
ATCGAACACACCAATGATATCGAAATTTTCAGTAATAACTCTGCTGGAGC
AATTCAGGGCTACGGTTATCTATTCCATGAGCAAGACGAATACGGGCCAC
GGATTCTTCGACTTAACAACGTGACTGATTTCAGTGTGCATGACTTGATC
TTGGTGGATTCACCGGCCTACTTCCTCAACTTAGTTGAGTCATACAACGG
CGAGGTGTACAACATGGTCATTCGTGGCGCCAGTATGGGAGGGCTCGACG
GAATCGATATTTCCGGAGCCAATTACTGGATCCATGACGTTGAGGTCACT
AACGGCGACGAATGTGTGACTGTGAAGAGTCCATCGGCCAACGTCCGGGT
AGAAAATGTCTTTTGCAACCACAGTGGCGGATGCGCGATGGGATCACTTG
GAACGGACACGAATATCTCTAACATTGAATACGAGAACATCTACACTTAC
AACTCCACTCAGATGTACATGATCAAGTCCAATGGGGGTAATGGCACAGT
TACAAACTGTTCTTTCAAGAACTTCATTGGATATAGCAACGCCTACATGC
TAGATTTGGATACATACTGGGGTGATCAGAGCGATGGTGACGGTATCAAG
TACGAGAATATCGGTTTTGAAAATTGGAAGGGTACCAGTTCGAATGGCAT
TCAGCGAAGCCCCATCAGGATTCTTTGCCCGGACGAGAATCCATGCACGA
ATATTACCCTAACAGCCGTTGAACTGTGGACTGATACTGGAGATTACGTC
AAGCAGGAATGCTCCAGTGCCTACGGCGAAGGCGAATGTTTGCGACAGCA
AAATGGCACCCTTGCCTCATATTCTTTTACGACCACGATTACCTCGGTGC
CTGTCACCGCGTACAGTCCGACGACGACGATGCCCGGCCTGATTTCGACA
TCCATGGATACTACGACCTCTATTCCGATTCCGACAATTCCTACCAGCTT
TTTCCCAGGTGCCTCAGCTTACAGCACACTTATGGCGAATATGTAAATGC
TTGTTACTCCTCTGATTGCACTTCTGCCCGCCATTGCGGCGGCGCAGGTC
TCAGGGACCGTGGGGCCACGTACGAGTGCGTCTGCGAAAGCCGCAGAGAA
AGTATGCAACGTACTTGACTACGGGGCATCCGCAAATTCGACCAATGATA
TCGGACCGCCACTCAAGGAAGCCTTCCAAGACTGCCAAACAGGCGGACTA
GTTTATATCCCGGAAGGGAACTATCTCCTTTCGTCGTGGGTGTCACTAGT
TTATGGTTCTGGTTGGGCTTTGCAACTAGATGGCATTATTTACCGAGACA
AGAATGTCACCGATGGAGGAAATATGATATTCATCGAACACACCAATGAT
ATCGAAATTTTCAGTAATAACTCTGCTGGAGCAATTCAGGGCTACGGTTA
TCTATTCCATGAGCAAGACGAATACGGGCCACGGATTCTTCGACTTAACA
ACGTGACTGATTTCAGTGTGCATGACTTGATCTTGGTGGATTCACCGGCC
TACTTCCTCAACTTAGTTGAGTCATACAACGGCGAGGTGTACAACATGGT
CATTCGTGGCGCCAGTATGGGAGGGCTCGACGGAATCGATATTTCCGGAG
CCAATTACTGGATCCATGACGTTGAGGTCACTAACGGCGACGAATGTGTG
ACTGTGAAGAGTCCATCGGCCAACGTCCGGGTAGAAAATGTCTTTTGCAA
CCACAGTGGCGGATGCGCGATGGGATCACTTGGAACGGACACGAATATCT
CTAACATTGAATACGAGAACATCTACACTTACAACTCCACTCAGATGTAC
ATGATCAAGTCCAATGGGGGTAATGGCACAGTTACAAACTGTTCTTTCAA
GAACTTCATTGGATATAGCAACGCCTACATGCTAGATTTGGATACATACT
GGGGTGATCAGAGCGATGGTGACGGTATCAAGTACGAGAATATCGGTTTT
GAAAATTGGAAGGGTACCAGTTCGAATGGCATTCAGCGAAGCCCCATCAG
GATTCTTTGCCCGGACGAGAATCCATGCACGAATATTACCCTAACAGCCG
TTGAACTGTGGACTGATACTGGAGATTACGTCAAGCAGGAATGCTCCAGT
GCCTACGGCGAAGGCGAATGTTTGCGACAGCAAAATGGCACCCTTGCCTC
ATATTCTTTTACGACCACGATTACCTCGGTGCCTGTCACCGCGTACAGTC
CGACGACGACGATGCCCGGCCTGATTTCGACATCCATGGATACTACGACC
TCTATTCCGATTCCGACAATTCCTACCAGCTTTTTCCCAGGTGCCTCAGC
TTACAGCACACTTATGGCGAATATGTAAATGCTTGTTACTCCTCTGATTG
CACTTCTGCCCGCCATTGCGGCGGCGCAGGTCTCAGGGACCGTGGGGCCA
CGTACGAGTGCGTCTGCGAAAGCCGCAGAGAAAGTATGCAACGTACTTGA
CTACGGGGCATCCGCAAATTCGACCAATGATATCGGACCGCCACTCAAGG
AAGCCTTCCAAGACTGCCAAACAGGCGGACTAGTTTATATCCCGGAAGGG
AACTATCTCCTTTCGTCGTGGGTGTCACTAGTTTATGGTTCTGGTTGGGC
TTTGCAACTAGATGGCATTATTTACCGAGACAAGAATGTCACCGATGGAG
GAAATATGATATTCATCGAACACACCAATGATATCGAAATTTTCAGTAAT
AACTCTGCTGGAGCAATTCAGGGCTACGGTTATCTATTCCATGAGCAAGA
CGAATACGGGCCACGGATTCTTCGACTTAACAACGTGACTGATTTCAGTG
TGCATGACTTGATCTTGGTGGATTCACCGGCCTACTTCCTCAACTTAGTT
GAGTCATACAACGGCGAGGTGTACAACATGGTCATTCGTGGCGCCAGTAT
GGGAGGGCTCGACGGAATCGATATTTCCGGAGCCAATTACTGGATCCATG
ACGTTGAGGTCACTAACGGCGACGAATGTGTGACTGTGAAGAGTCCATCG
GCCAACGTCCGGGTAGAAAATGTCTTTTGCAACCACAGTGGCGGATGCGC
GATGGGATCACTTGGAACGGACACGAATATCTCTAACATTGAATACGAGA
ACATCTACACTTACAACTCCACTCAGATGTACATGATCAAGTCCAATGGG
GGTAATGGCACAGTTACAAACTGTTCTTTCAAGAACTTCATTGGATATAG
CAACGCCTACATGCTAGATTTGGATACATACTGGGGTGATCAGAGCGATG
GTGACGGTATCAAGTACGAGAATATCGGTTTTGAAAATTGGAAGGGTACC
AGTTCGAATGGCATTCAGCGAAGCCCCATCAGGATTCTTTGCCCGGACGA
GAATCCATGCACGAATATTACCCTAACAGCCGTTGAACTGTGGACTGATA
CTGGAGATTACGTCAAGCAGGAATGCTCCAGTGCCTACGGCGAAGGCGAA
TGTTTGCGACAGCAAAATGGCACCCTTGCCTCATATTCTTTTACGACCAC
GATTACCTCGGTGCCTGTCACCGCGTACAGTCCGACGACGACGATGCCCG
GCCTGATTTCGACATCCATGGATACTACGACCTCTATTCCGATTCCGACA
ATTCCTACCAGCTTTTTCCCAGGTGCCTCAGCTTACAGCACACTTATGGC
GAATATGTAAATGCTTGTTACTCCTCTGATTGCACTTCTGCCCGCCATTG
CGGCGGCGCAGGTCTCAGGGACCGTGGGGCCACGTACGAGTGCGTCTGCG
AAAGCCGCAGAGAAAGTATGCAACGTACTTGACTACGGGGCATCCGCAAA
TTCGACCAATGATATCGGACCGCCACTCAAGGAAGCCTTCCAAGACTGCC
AAACAGGCGGACTAGTTTATATCCCGGAAGGGAACTATCTCCTTTCGTCG
TGGGTGTCACTAGTTTATGGTTCTGGTTGGGCTTTGCAACTAGATGGCAT
TATTTACCGAGACAAGAATGTCACCGATGGAGGAAATATGATATTCATCG
AACACACCAATGATATCGAAATTTTCAGTAATAACTCTGCTGGAGCAATT
CAGGGCTACGGTTATCTATTCCATGAGCAAGACGAATACGGGCCACGGAT
TCTTCGACTTAACAACGTGACTGATTTCAGTGTGCATGACTTGATCTTGG
TGGATTCACCGGCCTACTTCCTCAACTTAGTTGAGTCATACAACGGCGAG
GTGTACAACATGGTCATTCGTGGCGCCAGTATGGGAGGGCTCGACGGAAT
CGATATTTCCGGAGCCAATTACTGGATCCATGACGTTGAGGTCACTAACG
GCGACGAATGTGTGACTGTGAAGAGTCCATCGGCCAACGTCCGGGTAGAA
AATGTCTTTTGCAACCACAGTGGCGGATGCGCGATGGGATCACTTGGAAC
GGACACGAATATCTCTAACATTGAATACGAGAACATCTACACTTACAACT
CCACTCAGATGTACATGATCAAGTCCAATGGGGGTAATGGCACAGTTACA
AACTGTTCTTTCAAGAACTTCATTGGATATAGCAACGCCTACATGCTAGA
TTTGGATACATACTGGGGTGATCAGAGCGATGGTGACGGTATCAAGTACG
AGAATATCGGTTTTGAAAATTGGAAGGGTACCAGTTCGAATGGCATTCAG
CGAAGCCCCATCAGGATTCTTTGCCCGGACGAGAATCCATGCACGAATAT
TACCCTAACAGCCGTTGAACTGTGGACTGATACTGGAGATTACGTCAAGC
AGGAATGCTCCAGTGCCTACGGCGAAGGCGAATGTTTGCGACAGCAAAAT
GGCACCCTTGCCTCATATTCTTTTACGACCACGATTACCTCGGTGCCTGT
CACCGCGTACAGTCCGACGACGACGATGCCCGGCCTGATTTCGACATCCA
TGGATACTACGACCTCTATTCCGATTCCGACAATTCCTACCAGCTTTTTC
CCAGGTGCCTCAGCTTACAGCACACTTATGGCGAATATGTAAATGCTTGT
TACTCCTCTGATTGCACTTCTGCCCGCCATTGCGGCGGCGCAGGTCTCAG
GGACCGTGGGGCCACGTACGAGTGCGTCTGCGAAAGCCGCAGAGAAAGTA
TGCAACGTACTTGACTACGGGGCATCCGCAAATTCGACCAATGATATCGG
ACCGCCACTCAAGGAAGCCTTCCAAGACTGCCAAACAGGCGGACTAGTTT
ATATCCCGGAAGGGAACTATCTCCTTTCGTCGTGGGTGTCACTAGTTTAT
GGTTCTGGTTGGGCTTTGCAACTAGATGGCATTATTTACCGAGACAAGAA
TGTCACCGATGGAGGAAATATGATATTCATCGAACACACCAATGATATCG
AAATTTTCAGTAATAACTCTGCTGGAGCAATTCAGGGCTACGGTTATCTA
TTCCATGAGCAAGACGAATACGGGCCACGGATTCTTCGACTTAACAACGT
GACTGATTTCAGTGTGCATGACTTGATCTTGGTGGATTCACCGGCCTACT
TCCTCAACTTAGTTGAGTCATACAACGGCGAGGTGTACAACATGGTCATT
CGTGGCGCCAGTATGGGAGGGCTCGACGGAATCGATATTTCCGGAGCCAA
TTACTGGATCCATGACGTTGAGGTCACTAACGGCGACGAATGTGTGACTG
TGAAGAGTCCATCGGCCAACGTCCGGGTAGAAAATGTCTTTTGCAACCAC
AGTGGCGGATGCGCGATGGGATCACTTGGAACGGACACGAATATCTCTAA
CATTGAATACGAGAACATCTACACTTACAACTCCACTCAGATGTACATGA
TCAAGTCCAATGGGGGTAATGGCACAGTTACAAACTGTTCTTTCAAGAAC
TTCATTGGATATAGCAACGCCTACATGCTAGATTTGGATACATACTGGGG
TGATCAGAGCGATGGTGACGGTATCAAGTACGAGAATATCGGTTTTGAAA
ATTGGAAGGGTACCAGTTCGAATGGCATTCAGCGAAGCCCCATCAGGATT
CTTTGCCCGGACGAGAATCCATGCACGAATATTACCCTAACAGCCGTTGA
ACTGTGGACTGATACTGGAGATTACGTCAAGCAGGAATGCTCCAGTGCCT
ACGGCGAAGGCGAATGTTTGCGACAGCAAAATGGCACCCTTGCCTCATAT
TCTTTTACGACCACGATTACCTCGGTGCCTGTCACCGCGTACAGTCCGAC
GACGACGATGCCCGGCCTGATTTCGACATCCATGGATACTACGACCTCTA
TTCCGATTCCGACAATTCCTACCAGCTTTTTCCCAGGTGCCTCAGCTTAC
AGCACACTTATGGCGAATATGTAAATGCTTGTTACTCCTCTGATTGCACT
TCTGCCCGCCATTGCGGCGGCGCAGGTCTCAGGGACCGTGGGGCCACGTA
CGAGTGCGTCTGCGAAAGCCGCAGAGAAAGTATGCAACGTACTTGACTAC
GGGGCATCCGCAAATTCGACCAATGATATCGGACCGCCACTCAAGGAAGC
CTTCCAAGACTGCCAAACAGGCGGACTAGTTTATATCCCGGAAGGGAACT
ATCTCCTTTCGTCGTGGGTGTCACTAGTTTATGGTTCTGGTTGGGCTTTG
CAACTAGATGGCATTATTTACCGAGACAAGAATGTCACCGATGGAGGAAA
TATGATATTCATCGAACACACCAATGATATCGAAATTTTCAGTAATAACT
CTGCTGGAGCAATTCAGGGCTACGGTTATCTATTCCATGAGCAAGACGAA
TACGGGCCACGGATTCTTCGACTTAACAACGTGACTGATTTCAGTGTGCA
TGACTTGATCTTGGTGGATTCACCGGCCTACTTCCTCAACTTAGTTGAGT
CATACAACGGCGAGGTGTACAACATGGTCATTCGTGGCGCCAGTATGGGA
GGGCTCGACGGAATCGATATTTCCGGAGCCAATTACTGGATCCATGACGT
TGAGGTCACTAACGGCGACGAATGTGTGACTGTGAAGAGTCCATCGGCCA
ACGTCCGGGTAGAAAATGTCTTTTGCAACCACAGTGGCGGATGCGCGATG
GGATCACTTGGAACGGACACGAATATCTCTAACATTGAATACGAGAACAT
CTACACTTACAACTCCACTCAGATGTACATGATCAAGTCCAATGGGGGTA
ATGGCACAGTTACAAACTGTTCTTTCAAGAACTTCATTGGATATAGCAAC
GCCTACATGCTAGATTTGGATACATACTGGGGTGATCAGAGCGATGGTGA
CGGTATCAAGTACGAGAATATCGGTTTTGAAAATTGGAAGGGTACCAGTT
CGAATGGCATTCAGCGAAGCCCCATCAGGATTCTTTGCCCGGACGAGAAT
CCATGCACGAATATTACCCTAACAGCCGTTGAACTGTGGACTGATACTGG
AGATTACGTCAAGCAGGAATGCTCCAGTGCCTACGGCGAAGGCGAATGTT
TGCGACAGCAAAATGGCACCCTTGCCTCATATTCTTTTACGACCACGATT
ACCTCGGTGCCTGTCACCGCGTACAGTCCGACGACGACGATGCCCGGCCT
GATTTCGACATCCATGGATACTACGACCTCTATTCCGATTCCGACAATTC
CTACCAGCTTTTTCCCAGGTGCCTCAGCTTACAGCACACTTATGGCGAAT
ATGTAAATGCTTGTTACTCCTCTGATTGCACTTCTGCCCGCCATTGCGGC
GGCGCAGGTCTCAGGGACCGTGGGGCCACGTACGAGTGCGTCTGCGAAAG
CCGCAGAGAAAGTATGCAACGTACTTGACTACGGGGCATCCGCAAATTCG
ACCAATGATATCGGACCGCCACTCAAGGAAGCCTTCCAAGACTGCCAAAC
AGGCGGACTAGTTTATATCCCGGAAGGGAACTATCTCCTTTCGTCGTGGG
TGTCACTAGTTTATGGTTCTGGTTGGGCTTTGCAACTAGATGGCATTATT
TACCGAGACAAGAATGTCACCGATGGAGGAAATATGATATTCATCGAACA
CACCAATGATATCGAAATTTTCAGTAATAACTCTGCTGGAGCAATTCAGG
GCTACGGTTATCTATTCCATGAGCAAGACGAATACGGGCCACGGATTCTT
CGACTTAACAACGTGACTGATTTCAGTGTGCATGACTTGATCTTGGTGGA
TTCACCGGCCTACTTCCTCAACTTAGTTGAGTCATACAACGGCGAGGTGT
ACAACATGGTCATTCGTGGCGCCAGTATGGGAGGGCTCGACGGAATCGAT
ATTTCCGGAGCCAATTACTGGATCCATGACGTTGAGGTCACTAACGGCGA
CGAATGTGTGACTGTGAAGAGTCCATCGGCCAACGTCCGGGTAGAAAATG
TCTTTTGCAACCACAGTGGCGGATGCGCGATGGGATCACTTGGAACGGAC
ACGAATATCTCTAACATTGAATACGAGAACATCTACACTTACAACTCCAC
TCAGATGTACATGATCAAGTCCAATGGGGGTAATGGCACAGTTACAAACT
GTTCTTTCAAGAACTTCATTGGATATAGCAACGCCTACATGCTAGATTTG
GATACATACTGGGGTGATCAGAGCGATGGTGACGGTATCAAGTACGAGAA
TATCGGTTTTGAAAATTGGAAGGGTACCAGTTCGAATGGCATTCAGCGAA
GCCCCATCAGGATTCTTTGCCCGGACGAGAATCCATGCACGAATATTACC
CTAACAGCCGTTGAACTGTGGACTGATACTGGAGATTACGTCAAGCAGGA
ATGCTCCAGTGCCTACGGCGAAGGCGAATGTTTGCGACAGCAAAATGGCA
CCCTTGCCTCATATTCTTTTACGACCACGATTACCTCGGTGCCTGTCACC
GCGTACAGTCCGACGACGACGATGCCCGGCCTGATTTCGACATCCATGGA
TACTACGACCTCTATTCCGATTCCGACAATTCCTACCAGCTTTTTCCCAG
GTGCCTCAGCTTACAGCACACTTATGGCGAATATGTAAATGCTTGTTACT
CCTCTGATTGCACTTCTGCCCGCCATTGCGGCGGCGCAGGTCTCAGGGAC
CGTGGGGCCACGTACGAGTGCGTCTGCGAAAGCCGCAGAGAAAGTATGCA
ACGTACTTGACTACGGGGCATCCGCAAATTCGACCAATGATATCGGACCG
CCACTCAAGGAAGCCTTCCAAGACTGCCAAACAGGCGGACTAGTTTATAT
CCCGGAAGGGAACTATCTCCTTTCGTCGTGGGTGTCACTAGTTTATGGTT
CTGGTTGGGCTTTGCAACTAGATGGCATTATTTACCGAGACAAGAATGTC
ACCGATGGAGGAAATATGATATTCATCGAACACACCAATGATATCGAAAT
TTTCAGTAATAACTCTGCTGGAGCAATTCAGGGCTACGGTTATCTATTCC
ATGAGCAAGACGAATACGGGCCACGGATTCTTCGACTTAACAACGTGACT
GATTTCAGTGTGCATGACTTGATCTTGGTGGATTCACCGGCCTACTTCCT
CAACTTAGTTGAGTCATACAACGGCGAGGTGTACAACATGGTCATTCGTG
GCGCCAGTATGGGAGGGCTCGACGGAATCGATATTTCCGGAGCCAATTAC
TGGATCCATGACGTTGAGGTCACTAACGGCGACGAATGTGTGACTGTGAA
GAGTCCATCGGCCAACGTCCGGGTAGAAAATGTCTTTTGCAACCACAGTG
GCGGATGCGCGATGGGATCACTTGGAACGGACACGAATATCTCTAACATT
GAATACGAGAACATCTACACTTACAACTCCACTCAGATGTACATGATCAA
GTCCAATGGGGGTAATGGCACAGTTACAAACTGTTCTTTCAAGAACTTCA
TTGGATATAGCAACGCCTACATGCTAGATTTGGATACATACTGGGGTGAT
CAGAGCGATGGTGACGGTATCAAGTACGAGAATATCGGTTTTGAAAATTG
GAAGGGTACCAGTTCGAATGGCATTCAGCGAAGCCCCATCAGGATTCTTT
GCCCGGACGAGAATCCATGCACGAATATTACCCTAACAGCCGTTGAACTG
TGGACTGATACTGGAGATTACGTCAAGCAGGAATGCTCCAGTGCCTACGG
CGAAGGCGAATGTTTGCGACAGCAAAATGGCACCCTTGCCTCATATTCTT
TTACGACCACGATTACCTCGGTGCCTGTCACCGCGTACAGTCCGACGACG
ACGATGCCCGGCCTGATTTCGACATCCATGGATACTACGACCTCTATTCC
GATTCCGACAATTCCTACCAGCTTTTTCCCAGGTGCCTCAGCTTACAGCA
CACTTATGGCGAATATGTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0005975 | carbohydrate metabolic process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004650 | polygalacturonase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_2.7 |
| Note | antiSMASH:Cluster_2.8 |
| Note | SECRETED:SignalP(1-20) |
| Note | CAZy:GH28 |
| DBxref | InterPro:IPR011050 |
| DBxref | InterPro:IPR000743 |
| DBxref | InterPro:IPR012334 |
| DBxref | PFAM:PF12708 |
| DBxref | PFAM:PF00295 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:2394181..2396056 + |
|
