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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:2443496..2444915- Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_002389-T1 ID=KJC3_002389-T1|Name=KJC3_002389-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1420bp|location=Sequence derived from alignment at ch2:2443496..2444915- (Aspergillus niger KJC3)
GTGTGGCGTGGTCATTATAGTCATATAACCGATCCATTCTATCCGACAAA
TAACCTGCTGCACCACCTTTACCACATACTTTTGTGCAAAGTACCTGTCT
GGCAAGATTGGAAGCCCTAACCAACCTCCAACGGCGCGGTTACATCATCC
TGAACAAACCCATCCCAACTCAATTGCAATCCTCAAAACCATCATCACCT
TGAATATATCTACATTCCTTATAATTAGATCTCTATCACAAATAAACACA
CAATCTTCAATTATTCTTCTAATTACCACAACAACCACATATATTCACCA
ACCATTACACCACCAATCAACATCCCCCTCTACATACAAACCAACAATGT
CCACAAACATCACCAACATCCCCCTCAGCTACGCAACCTGCTCCCTCGGG
CCCCCCAGCACTCCCCTCGAAGACAAACTCTCCTCCCTCAGCGCCGCCTC
CTTCACCGGCATCGAGCTGGCCTTCCCCGACCTCCTCGCCTACGCCAACA
CCCACAACGCAGGAACCACCCAGATTCTTCCCCACGACTACACCTCCTTA
GCCCACGCCGCAACCGAAGTCCGCTCACTATGCGAGTCCCACAACCTACA
GATCATGATGCTACAACCCTTCGCCAACTTCGAAGGCTGGCCACGTAACT
CCCCGGAACGGGAAGACGCCTTCACGCGCGCCAAGGGATGGAGTCAGATC
ATGGAAGCACTGGGGACGAAGATACTACAGATCGGGTCGACAGACACACC
GGCCGAGAAACTCTCCCTCGGTAAGAACAAGGAGAATGTGGTGGACGATC
TACGTGAGCTAGCGGATATACTCGCACCGAAAGGTCAGCGCATCGCGTAC
GAGAACTGGTGCTGGAGTACCCATGCGCCCGGGTGGAAAGATGTATGGGA
GATAGTGAGGGATGTGGGGAGGGAGAATGTGGGGTTGTGTTTGGATACGT
TTCAGACGGCGGGGGGGGAGTGGGGGGATCCGACGACTGCGGATGGGGTG
GTTGGTGGTGGTGGTGATGAGGTGAGGAAGAGGTATGAGAGCAGTTTGGA
GGAGTTGGCCAGGACGGTTCCCGCGGAGAAGATCTTTCTGCTGCAGGTGT
CGGATGCGTATAAGCCACCGTCTCCGTTTGAGGATGCGGTGGTGGATGGG
GCGAGGCCTAGGGCACGGTGGAGTCATAGTTTTAGGCCGATGCCGTATCA
TGGGGGGTATTTGCCGATTGAGGAGGTGGGGAGGGCGGTGTTGAGGACTG
GATTTCGGGGGTGGTTTTCGATGGAGATTTTTGATGGGGGAGTGAATGGG
GATGAGGAGATTGAGGATGTGGGGAAGTTTGCGAGGGAGGCGATGGGGAG
TATGAGGAGGTTTTTGGAGAGGTGCGCGGATGGTGTTTAGCTCGTAATTA
TTGGGGAGGAGGGTTAGGAT back to topCoding sequence (CDS) from alignment at ch2:2443496..2444915- >KJC3_002389-T1 ID=KJC3_002389-T1|Name=KJC3_002389-T1|organism=Aspergillus niger KJC3|type=CDS|length=1044bp|location=Sequence derived from alignment at ch2:2443496..2444915- (Aspergillus niger KJC3)
ATGTCCACAAACATCACCAACATCCCCCTCAGCTACGCAACCTGCTCCCT
CGGGCCCCCCAGCACTCCCCTCGAAGACAAACTCTCCTCCCTCAGCGCCG
CCTCCTTCACCGGCATCGAGCTGGCCTTCCCCGACCTCCTCGCCTACGCC
AACACCCACAACGCAGGAACCACCCAGATTCTTCCCCACGACTACACCTC
CTTAGCCCACGCCGCAACCGAAGTCCGCTCACTATGCGAGTCCCACAACC
TACAGATCATGATGCTACAACCCTTCGCCAACTTCGAAGGCTGGCCACGT
AACTCCCCGGAACGGGAAGACGCCTTCACGCGCGCCAAGGGATGGAGTCA
GATCATGGAAGCACTGGGGACGAAGATACTACAGATCGGGTCGACAGACA
CACCGGCCGAGAAACTCTCCCTCGGTAAGAACAAGGAGAATGTGGTGGAC
GATCTACGTGAGCTAGCGGATATACTCGCACCGAAAGGTCAGCGCATCGC
GTACGAGAACTGGTGCTGGAGTACCCATGCGCCCGGGTGGAAAGATGTAT
GGGAGATAGTGAGGGATGTGGGGAGGGAGAATGTGGGGTTGTGTTTGGAT
ACGTTTCAGACGGCGGGGGGGGAGTGGGGGGATCCGACGACTGCGGATGG
GGTGGTTGGTGGTGGTGGTGATGAGGTGAGGAAGAGGTATGAGAGCAGTT
TGGAGGAGTTGGCCAGGACGGTTCCCGCGGAGAAGATCTTTCTGCTGCAG
GTGTCGGATGCGTATAAGCCACCGTCTCCGTTTGAGGATGCGGTGGTGGA
TGGGGCGAGGCCTAGGGCACGGTGGAGTCATAGTTTTAGGCCGATGCCGT
ATCATGGGGGGTATTTGCCGATTGAGGAGGTGGGGAGGGCGGTGTTGAGG
ACTGGATTTCGGGGGTGGTTTTCGATGGAGATTTTTGATGGGGGAGTGAA
TGGGGATGAGGAGATTGAGGATGTGGGGAAGTTTGCGAGGGAGGCGATGG
GGAGTATGAGGAGGTTTTTGGAGAGGTGCGCGGATGGTGTTTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002389-T1.utr3p1 | KJC3_002389-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002389-T1.utr5p1 | KJC3_002389-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036237 |
| DBxref | InterPro:IPR013022 |
| DBxref | PFAM:PF01261 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:2443496..2444915 - |
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