You are here

Home

KJC3_002421-T1, KJC3_002421-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_002421-T1
Unique NameKJC3_002421-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:2523046..2524266+

Legend: five_prime_UTRexonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_002421-T1 ID=KJC3_002421-T1|Name=KJC3_002421-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1221bp|location=Sequence derived from alignment at ch2:2523046..2524266+ (Aspergillus niger KJC3)
CACCGCCGCCGCGCTGGCTCGCCAAGCACCATCTCTATACCCTCCCTACC
ACCACATACTGCCATACGCACTCCCATCCGCCCAAAATGCAAGGCTTCAG
TACGTCCCCTCCCTTCCCCTCCCCAACCCCCAACCATCTACATCAATTAC
TAACCCCCACCAGACATGGGACGCTACGTCCCCCCGGACCTCGAAGGCCT
AACCACGGGCAACAAACTCCACAACAAACACCCCCTCGGTTCCCGCGCGC
GCAACCTGCAATCTACGGGCGCCCTAACCGTCCGCTTCGAGATGCCCTTC
GCGATCTGGTGCACGACATGCCAACCACACGAAACCATCATCGGGCAGGG
GGTGCGCTTCAACGCGGAGAAGAAGAAGATAGGGAATTACTACAGCACGC
CCGTCTACAGTTTCCGAATGAAGCACGGCGCCTGTGGCGGGTGGATCGAG
ATACACACGGATCCGAAGAACACGGAGTATGTGGTTATTTCCGGGGCACG
AAGGAGGGATTACGGGGTTGATGAGGAGGGGAGGAAAGTGGGGGAGATAA
TCACCGGGGATGATAAAGGGAAGATGGATGCGTTGGGGAGGTTAGAGGGG
AAGGTGGTGGATAAGAAGCGCGGGGAGGAGGAACGGGATCGGATTTTGGA
GTTGCAGAGGAGACAGGCGAGGGATTGGGAGGATCCGTATGAGAAGAGTC
GGAGGATTAGGAGAGTGTTTCGGGCCGAGAGGAAGGGGTTGGAGAGGAAG
GAGGAGGAGAGGGAGAAGTTGAAGGATAAGTTGAGTTTGGGGATTGAGGT
TGTCGATGAGATTGAGAGTGATCGGGTAAGGGCGGGGATGGTGGATTTTG
GGGAGACCGGGAGTGGGGTGGATGGACGGAGGGCGAGGATGAAGCCGTTG
TTTGGGGAGGAGGCGCGTGTTAATGGGGGAAAGAAGGAGGGGAAGAGGAT
GAAGGCTAAGGAGGTGCTTGAGGATCGGAAGGCTGCTTTTAGGAGTGAGT
TGAGGGGAAATACAAGGGCTGCTGTGGATCCGTTTTTGAGCAGTGATTCC
GGTGCCTGGAGGCCTGAGGTGAAGAGGAGGAAGATTGTCTCTGGGAGTAA
GGCGGATGATGGGAAGGAGAGTGGTGAGACTGGCTCGGAGGTGGAGAGGA
GTGTTGGGGAGACGGAAGAGACAGCTCGTCCGACGCTTGGGTTGGTGAGC
TATGCGTCGGATTCGGAGTGA
back to top

Coding sequence (CDS) from alignment at ch2:2523046..2524266+

>KJC3_002421-T1 ID=KJC3_002421-T1|Name=KJC3_002421-T1|organism=Aspergillus niger KJC3|type=CDS|length=2142bp|location=Sequence derived from alignment at ch2:2523046..2524266+ (Aspergillus niger KJC3)
ATGCAAGGCTTCAACATGGGACGCTACGTCCCCCCGGACCTCGAAGGCCT
AACCACGGGCAACAAACTCCACAACAAACACCCCCTCGGTTCCCGCGCGC
GCAACCTGCAATCTACGGGCGCCCTAACCGTCCGCTTCGAGATGCCCTTC
GCGATCTGGTGCACGACATGCCAACCACACGAAACCATCATCGGGCAGGG
GGTGCGCTTCAACGCGGAGAAGAAGAAGATAGGGAATTACTACAGCACGC
CCGTCTACAGTTTCCGAATGAAGCACGGCGCCTGTGGCGGGTGGATCGAG
ATACACACGGATCCGAAGAACACGGAGTATGTGGTTATTTCCGGGGCACG
AAGGAGGGATTACGGGGTTGATGAGGAGGGGAGGAAAGTGGGGGAGATAA
TCACCGGGGATGATAAAGGGAAGATGGATGCGTTGGGGAGGTTAGAGGGG
AAGGTGGTGGATAAGAAGCGCGGGGAGGAGGAACGGGATCGGATTTTGGA
GTTGCAGAGGAGACAGGCGAGGGATTGGGAGGATCCGTATGAGAAGAGTC
GGAGGATTAGGAGAGTGTTTCGGGCCGAGAGGAAGGGGTTGGAGAGGAAG
GAGGAGGAGAGGGAGAAGTTGAAGGATAAGTTGAGTTTGGGGATTGAGGT
TGTCGATGAGATTGAGAGTGATCGGGTAAGGGCGGGGATGGTGGATTTTG
GGGAGACCGGGAGTGGGGTGGATGGACGGAGGGCGAGGATGAAGCCGTTG
TTTGGGGAGGAGGCGCGTGTTAATGGGGGAAAGAAGGAGGGGAAGAGGAT
GAAGGCTAAGGAGGTGCTTGAGGATCGGAAGGCTGCTTTTAGGAGTGAGT
TGAGGGGAAATACAAGGGCTGCTGTGGATCCGTTTTTGAGCAGTGATTCC
GGTGCCTGGAGGCCTGAGGTGAAGAGGAGGAAGATTGTCTCTGGGAGTAA
GGCGGATGATGGGAAGGAGAGTGGTGAGACTGGCTCGGAGGTGGAGAGGA
GTGTTGGGGAGACGGAAGAGACAGCTCGTCCGACGCTTGGGTTGGTGAGC
TATGCGTCGGATTCGGAGTGAATGCAAGGCTTCAACATGGGACGCTACGT
CCCCCCGGACCTCGAAGGCCTAACCACGGGCAACAAACTCCACAACAAAC
ACCCCCTCGGTTCCCGCGCGCGCAACCTGCAATCTACGGGCGCCCTAACC
GTCCGCTTCGAGATGCCCTTCGCGATCTGGTGCACGACATGCCAACCACA
CGAAACCATCATCGGGCAGGGGGTGCGCTTCAACGCGGAGAAGAAGAAGA
TAGGGAATTACTACAGCACGCCCGTCTACAGTTTCCGAATGAAGCACGGC
GCCTGTGGCGGGTGGATCGAGATACACACGGATCCGAAGAACACGGAGTA
TGTGGTTATTTCCGGGGCACGAAGGAGGGATTACGGGGTTGATGAGGAGG
GGAGGAAAGTGGGGGAGATAATCACCGGGGATGATAAAGGGAAGATGGAT
GCGTTGGGGAGGTTAGAGGGGAAGGTGGTGGATAAGAAGCGCGGGGAGGA
GGAACGGGATCGGATTTTGGAGTTGCAGAGGAGACAGGCGAGGGATTGGG
AGGATCCGTATGAGAAGAGTCGGAGGATTAGGAGAGTGTTTCGGGCCGAG
AGGAAGGGGTTGGAGAGGAAGGAGGAGGAGAGGGAGAAGTTGAAGGATAA
GTTGAGTTTGGGGATTGAGGTTGTCGATGAGATTGAGAGTGATCGGGTAA
GGGCGGGGATGGTGGATTTTGGGGAGACCGGGAGTGGGGTGGATGGACGG
AGGGCGAGGATGAAGCCGTTGTTTGGGGAGGAGGCGCGTGTTAATGGGGG
AAAGAAGGAGGGGAAGAGGATGAAGGCTAAGGAGGTGCTTGAGGATCGGA
AGGCTGCTTTTAGGAGTGAGTTGAGGGGAAATACAAGGGCTGCTGTGGAT
CCGTTTTTGAGCAGTGATTCCGGTGCCTGGAGGCCTGAGGTGAAGAGGAG
GAAGATTGTCTCTGGGAGTAAGGCGGATGATGGGAAGGAGAGTGGTGAGA
CTGGCTCGGAGGTGGAGAGGAGTGTTGGGGAGACGGAAGAGACAGCTCGT
CCGACGCTTGGGTTGGTGAGCTATGCGTCGGATTCGGAGTGA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_002421KJC3_002421Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002421-T1.utr5p1KJC3_002421-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002421-T1.exon1KJC3_002421-T1.exon1Aspergillus niger KJC3exon
KJC3_002421-T1.exon2KJC3_002421-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002421-T1.cdsKJC3_002421-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002421-T1KJC3_002421-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR007590
DBxrefPFAM:PF04502
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:2523046..2524266 +
Powered by Drupal