You are here

Home

KJC3_002438-T1, KJC3_002438-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_002438-T1
Unique NameKJC3_002438-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:2570712..2572157+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_002438-T1 ID=KJC3_002438-T1|Name=KJC3_002438-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1446bp|location=Sequence derived from alignment at ch2:2570712..2572157+ (Aspergillus niger KJC3)
ATGCCTCCGTCTTCTACCGGAACCTGGAAGAAGAGCTCGACGTGCGCCGA
GCCCAGCACGGCTGCATCGCTGCACACCAAAGAGCAAACCTCCATGGTGG
ACTTTTCCTCTACCGATATCCTCGGGCTGAGCACCTCGGGCTCCGTCCGC
AAAGGCTACCTGGACGAGCTGGCCCAACACCCCGATTTCACGCTCAGCAG
CCACGGCTCACGTCTGACCGACGGCAACTCCAGATACCTGGAAGACGTCG
AGCGTGAGCTGGCTGCATTTCACGGCGCCGAGGCTGCGTTGATTGTCAAC
ACGGGGAGCCTGGGCAATGCCGCCATTTTCTCCGTTATTCCACGCCCCGG
CGATGCCATTGTGTATGATGAGCTCATTCACGCCAGCGTGCACGATGGTA
TGAAGGACAGCTTGGCCCTGTGTCGCAAGGCCTTCCGCCACAATGATGCC
GAATCGCTGTATGATGCCCTGGTGGCCGTCCAGGAATCGCAGCCCCAGAT
CCGCAACCGCACCCGATCGGTTTTGGTGGCGGTTGAGTCGGTCTATAGCA
TGGACGGGGATATCTGCCCGCTCCAGGAGCTGATTGAAACAGCCAAGGAG
GTGTTTCCGGACGGCAATGTTCAATTTGTCATTGACGAGGCGCACAGCAC
TGGGGTGATTGGGCCCAACGGTGCTGGGTTGGTGAGCGCCCTGGGGCTGG
AAAGCGAAGTGGCGATCCGACTGCATACGTTTGGGAAGGCGCTGGCTGCG
ACAGGAGGTAAGACACGATTGAACCGGTGTTGCTGAAGGATACACTGACT
TGACTCGGTAGCCGTAATCCTATGCAACGAGACCGTGCGCACAATGCTGA
TCAACTACGCCCGCAGCATCATGTTCTCCGTGGCGCCGTCCTTCCCCATG
CTGGCCTCCATTCGCGCTACATACCAGCTCCTGCGCAGTGGCGAGACACA
AGAGGTATAATGTGGCTCCCTACTTTACCGAAAGCTTAAGCTGACACGGC
AGCAGGCCCAGGACCGCGTCCAGGAGATCGTGAAATTCTTCCTGGAGACC
ATGACCTCCAATCCGATCTGGAGCAGGGCCAGCGACACCGGGCTTCTCCG
TCTTCCCACGTACGAAGACGCGGATGTCCAACCATTCCTCACCCAAATCA
TCCAGCTACGGACGCGCACCAAGCACAACTTCTACCTTGCGTTCCACCTG
CAACGGGCCGGGTTCTCCGTTTTCCCTATCTCGTATCCGGTGGTACCCAA
GGGGACGGAACGCGTTCGGATCATCTTCCATGCGTCGAACACGGACGCGG
AGGTGAATTCCCTGGTTGCTGCGATTGCGGAATGGGCCCAGGAGATGTTG
GAGATTGAGAGTAGCGGGGATCGAACGAGGGTGCCAGCTGCGGCGCGGCA
TGTGTATGCGTTGATTGCCCAGGCTAATCTGAATGGGAGCGGGTAG
back to top

Coding sequence (CDS) from alignment at ch2:2570712..2572157+

>KJC3_002438-T1 ID=KJC3_002438-T1|Name=KJC3_002438-T1|organism=Aspergillus niger KJC3|type=CDS|length=4023bp|location=Sequence derived from alignment at ch2:2570712..2572157+ (Aspergillus niger KJC3)
ATGCCTCCGTCTTCTACCGGAACCTGGAAGAAGAGCTCGACGTGCGCCGA
GCCCAGCACGGCTGCATCGCTGCACACCAAAGAGCAAACCTCCATGGTGG
ACTTTTCCTCTACCGATATCCTCGGGCTGAGCACCTCGGGCTCCGTCCGC
AAAGGCTACCTGGACGAGCTGGCCCAACACCCCGATTTCACGCTCAGCAG
CCACGGCTCACGTCTGACCGACGGCAACTCCAGATACCTGGAAGACGTCG
AGCGTGAGCTGGCTGCATTTCACGGCGCCGAGGCTGCGTTGATTGTCAAC
ACGGGGAGCCTGGGCAATGCCGCCATTTTCTCCGTTATTCCACGCCCCGG
CGATGCCATTGTGTATGATGAGCTCATTCACGCCAGCGTGCACGATGGTA
TGAAGGACAGCTTGGCCCTGTGTCGCAAGGCCTTCCGCCACAATGATGCC
GAATCGCTGTATGATGCCCTGGTGGCCGTCCAGGAATCGCAGCCCCAGAT
CCGCAACCGCACCCGATCGGTTTTGGTGGCGGTTGAGTCGGTCTATAGCA
TGGACGGGGATATCTGCCCGCTCCAGGAGCTGATTGAAACAGCCAAGGAG
GTGTTTCCGGACGGCAATGTTCAATTTGTCATTGACGAGGCGCACAGCAC
TGGGGTGATTGGGCCCAACGGTGCTGGGTTGGTGAGCGCCCTGGGGCTGG
AAAGCGAAGTGGCGATCCGACTGCATACGTTTGGGAAGGCGCTGGCTGCG
ACAGGAGCCGTAATCCTATGCAACGAGACCGTGCGCACAATGCTGATCAA
CTACGCCCGCAGCATCATGTTCTCCGTGGCGCCGTCCTTCCCCATGCTGG
CCTCCATTCGCGCTACATACCAGCTCCTGCGCAGTGGCGAGACACAAGAG
GCCCAGGACCGCGTCCAGGAGATCGTGAAATTCTTCCTGGAGACCATGAC
CTCCAATCCGATCTGGAGCAGGGCCAGCGACACCGGGCTTCTCCGTCTTC
CCACGTACGAAGACGCGGATGTCCAACCATTCCTCACCCAAATCATCCAG
CTACGGACGCGCACCAAGCACAACTTCTACCTTGCGTTCCACCTGCAACG
GGCCGGGTTCTCCGTTTTCCCTATCTCGTATCCGGTGGTACCCAAGGGGA
CGGAACGCGTTCGGATCATCTTCCATGCGTCGAACACGGACGCGGAGGTG
AATTCCCTGGTTGCTGCGATTGCGGAATGGGCCCAGGAGATGTTGGAGAT
TGAGAGTAGCGGGGATCGAACGAGGGTGCCAGCTGCGGCGCGGCATGTGT
ATGCGTTGATTGCCCAGGCTAATCTGAATGGGAGCGGGTAGATGCCTCCG
TCTTCTACCGGAACCTGGAAGAAGAGCTCGACGTGCGCCGAGCCCAGCAC
GGCTGCATCGCTGCACACCAAAGAGCAAACCTCCATGGTGGACTTTTCCT
CTACCGATATCCTCGGGCTGAGCACCTCGGGCTCCGTCCGCAAAGGCTAC
CTGGACGAGCTGGCCCAACACCCCGATTTCACGCTCAGCAGCCACGGCTC
ACGTCTGACCGACGGCAACTCCAGATACCTGGAAGACGTCGAGCGTGAGC
TGGCTGCATTTCACGGCGCCGAGGCTGCGTTGATTGTCAACACGGGGAGC
CTGGGCAATGCCGCCATTTTCTCCGTTATTCCACGCCCCGGCGATGCCAT
TGTGTATGATGAGCTCATTCACGCCAGCGTGCACGATGGTATGAAGGACA
GCTTGGCCCTGTGTCGCAAGGCCTTCCGCCACAATGATGCCGAATCGCTG
TATGATGCCCTGGTGGCCGTCCAGGAATCGCAGCCCCAGATCCGCAACCG
CACCCGATCGGTTTTGGTGGCGGTTGAGTCGGTCTATAGCATGGACGGGG
ATATCTGCCCGCTCCAGGAGCTGATTGAAACAGCCAAGGAGGTGTTTCCG
GACGGCAATGTTCAATTTGTCATTGACGAGGCGCACAGCACTGGGGTGAT
TGGGCCCAACGGTGCTGGGTTGGTGAGCGCCCTGGGGCTGGAAAGCGAAG
TGGCGATCCGACTGCATACGTTTGGGAAGGCGCTGGCTGCGACAGGAGCC
GTAATCCTATGCAACGAGACCGTGCGCACAATGCTGATCAACTACGCCCG
CAGCATCATGTTCTCCGTGGCGCCGTCCTTCCCCATGCTGGCCTCCATTC
GCGCTACATACCAGCTCCTGCGCAGTGGCGAGACACAAGAGGCCCAGGAC
CGCGTCCAGGAGATCGTGAAATTCTTCCTGGAGACCATGACCTCCAATCC
GATCTGGAGCAGGGCCAGCGACACCGGGCTTCTCCGTCTTCCCACGTACG
AAGACGCGGATGTCCAACCATTCCTCACCCAAATCATCCAGCTACGGACG
CGCACCAAGCACAACTTCTACCTTGCGTTCCACCTGCAACGGGCCGGGTT
CTCCGTTTTCCCTATCTCGTATCCGGTGGTACCCAAGGGGACGGAACGCG
TTCGGATCATCTTCCATGCGTCGAACACGGACGCGGAGGTGAATTCCCTG
GTTGCTGCGATTGCGGAATGGGCCCAGGAGATGTTGGAGATTGAGAGTAG
CGGGGATCGAACGAGGGTGCCAGCTGCGGCGCGGCATGTGTATGCGTTGA
TTGCCCAGGCTAATCTGAATGGGAGCGGGTAGATGCCTCCGTCTTCTACC
GGAACCTGGAAGAAGAGCTCGACGTGCGCCGAGCCCAGCACGGCTGCATC
GCTGCACACCAAAGAGCAAACCTCCATGGTGGACTTTTCCTCTACCGATA
TCCTCGGGCTGAGCACCTCGGGCTCCGTCCGCAAAGGCTACCTGGACGAG
CTGGCCCAACACCCCGATTTCACGCTCAGCAGCCACGGCTCACGTCTGAC
CGACGGCAACTCCAGATACCTGGAAGACGTCGAGCGTGAGCTGGCTGCAT
TTCACGGCGCCGAGGCTGCGTTGATTGTCAACACGGGGAGCCTGGGCAAT
GCCGCCATTTTCTCCGTTATTCCACGCCCCGGCGATGCCATTGTGTATGA
TGAGCTCATTCACGCCAGCGTGCACGATGGTATGAAGGACAGCTTGGCCC
TGTGTCGCAAGGCCTTCCGCCACAATGATGCCGAATCGCTGTATGATGCC
CTGGTGGCCGTCCAGGAATCGCAGCCCCAGATCCGCAACCGCACCCGATC
GGTTTTGGTGGCGGTTGAGTCGGTCTATAGCATGGACGGGGATATCTGCC
CGCTCCAGGAGCTGATTGAAACAGCCAAGGAGGTGTTTCCGGACGGCAAT
GTTCAATTTGTCATTGACGAGGCGCACAGCACTGGGGTGATTGGGCCCAA
CGGTGCTGGGTTGGTGAGCGCCCTGGGGCTGGAAAGCGAAGTGGCGATCC
GACTGCATACGTTTGGGAAGGCGCTGGCTGCGACAGGAGCCGTAATCCTA
TGCAACGAGACCGTGCGCACAATGCTGATCAACTACGCCCGCAGCATCAT
GTTCTCCGTGGCGCCGTCCTTCCCCATGCTGGCCTCCATTCGCGCTACAT
ACCAGCTCCTGCGCAGTGGCGAGACACAAGAGGCCCAGGACCGCGTCCAG
GAGATCGTGAAATTCTTCCTGGAGACCATGACCTCCAATCCGATCTGGAG
CAGGGCCAGCGACACCGGGCTTCTCCGTCTTCCCACGTACGAAGACGCGG
ATGTCCAACCATTCCTCACCCAAATCATCCAGCTACGGACGCGCACCAAG
CACAACTTCTACCTTGCGTTCCACCTGCAACGGGCCGGGTTCTCCGTTTT
CCCTATCTCGTATCCGGTGGTACCCAAGGGGACGGAACGCGTTCGGATCA
TCTTCCATGCGTCGAACACGGACGCGGAGGTGAATTCCCTGGTTGCTGCG
ATTGCGGAATGGGCCCAGGAGATGTTGGAGATTGAGAGTAGCGGGGATCG
AACGAGGGTGCCAGCTGCGGCGCGGCATGTGTATGCGTTGATTGCCCAGG
CTAATCTGAATGGGAGCGGGTAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0009058biosynthetic process
Vocabulary: Molecular Function
TermDefinition
GO:0030170pyridoxal phosphate binding
GO:0003824catalytic activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_002438KJC3_002438Aspergillus niger KJC3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002438-T1.exon1KJC3_002438-T1.exon1Aspergillus niger KJC3exon
KJC3_002438-T1.exon2KJC3_002438-T1.exon2Aspergillus niger KJC3exon
KJC3_002438-T1.exon3KJC3_002438-T1.exon3Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002438-T1.cdsKJC3_002438-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002438-T1KJC3_002438-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
NoteantiSMASH:Cluster_2.11
NoteantiSMASH:Cluster_2.10
NoteSMCOG1109:8-amino-7-oxononanoate synthase
DBxrefInterPro:IPR015424
DBxrefInterPro:IPR004839
DBxrefInterPro:IPR015422
DBxrefInterPro:IPR015421
DBxrefPFAM:PF00155
Productputative secondary metabolism biosynthetic enzyme
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:2570712..2572157 +
Powered by Drupal