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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:2596105..2597793+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_002446-T1 ID=KJC3_002446-T1|Name=KJC3_002446-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1689bp|location=Sequence derived from alignment at ch2:2596105..2597793+ (Aspergillus niger KJC3)
TAGTATTGTTGACCCTCAAGCTACAATTGCTAGTATGCATTGATGCTATT
GCCGAATCTTCGACCGAACAATCTTGTAGATGGTGGATAACACCATAACA
CAAGTTGATCTGTCATATTAGCGGTGCAGTATTTGTCTCTAGGTTGGGCC
AAAATTTCGGCCGAACCCTCGGTCCAAGAAGCTATATAGATCAGCTCTCT
CCGGCACCGACGAGCTCAACAAATACAACTTCAATTCAAACAAAACAAAG
GACTGTTTGAGTCTAGAGTTTGGTTCTCTCCCTTATTCATTATTCATAAT
GGTCAAAATTGCAATTGCTGGTGGCTCTGGCGGTAGGTCCTTCCCGCTGT
GCCTGCTCTGGTCAGTTATATTACTGACCTTCAACCAGGTGTTGGCCGAG
AGGTCATCGACGCACTCATTGCTGCGAATAAGCATGAGATCATTGTCCTT
ACCAGAAAGGTTGGCTATCTCATAATATTCGTAGCCAATGAGAGTATTGT
GACATTAACCAGCCCCTGTAGGATGCCTCAGCCAAAACTTCTATTCAAGG
CATCACTTGGGTAAAGGCCGATTACAGCGACATTACCCAATTAACCAAAG
TTCTGCAAGGAGTGCACACTGTTCTCTCCTTCGTCACCGCGCAGGATGAT
CCCGCAAGCACCGTTCAGAAGAACCTCATCGATGCCGCTGTGCAGGCCGG
AGTGAAGCGCTTCGCGCCGAGTGAATGGGCCTCGTGAGAATTCTGCATCC
TGGTTCTACCATCATCCAAACACTGACCTAGTACAGATCCGGCTTAGATT
ACCTGGACTGGTACGCTTACAAAGGCGAGACGCGCCGATACCTCCAAGAG
CTGAACAAGGAGAGAATGGTACGATCAGGCAGCATTTCAGTGGGCGGAAT
AGCTAACAGTAAATAAACCAGGTCCTCGAGTATACTCTCTTCCAACCCGG
CGTGTTCGTCAACTATCTGACCCATCCACATCAATCGGCCCGCCACCTGC
CCACGATCGGAACTCCCTTTGATTTTGCCAACCGCCGAATGATCTTGGTG
GATGGGGACGATAAGGCCCGTCTCACCTGGACGGCTGTTCAGGACCTTGC
TGGAGTTGTAGCTAGAGCTGTCGACTACGAGGGCGAGTGGCCGGTGGTTG
GGGGTATCCAGGGTGCTAATATCTCCGTTGGCCAACTCATCACTCTGGGA
GAGAAGGTTCGCGGTGAGTTTATAATCTCTCAGGCTATGCCATATAAATT
GTATGTTGACTATTTCTCTCTAGGTGGGCTGTCCTTCACAATCGAACGGG
TGAAGGCGCAGGACCTTGAAGCCGGAACGTGGGAAACCTCATGGACACCA
ACAGTGGATCACGCTTCCATTCCGCCCGAGCAGGCGGCAGTGGCTTCAAA
GTATATGACCAGTCGAATTATTTTGGCGGCTGATGCTGGCTCCTATCTAG
TCTCCGATGAATGGAACCGTCTACTGCCTGACTTCAAATTTACAGCCATC
GAGGAGTTCTTGGCTGAGGCGTGGAAGGGAAAGGCTTGAGTATGCGGTCG
GGAAGGCTGATACGGATACGCAGGTAGAGGGTGCTATCTAGCTTAGTAAA
TATAACGCGTCTTTAGAGACATTATTTACGCCATAGCGTATTATACTAGG
GCTGATGTGAGCATGGCGTTGTTCCGCCGAAACTCGGGC back to topCoding sequence (CDS) from alignment at ch2:2596105..2597793+ >KJC3_002446-T1 ID=KJC3_002446-T1|Name=KJC3_002446-T1|organism=Aspergillus niger KJC3|type=CDS|length=5742bp|location=Sequence derived from alignment at ch2:2596105..2597793+ (Aspergillus niger KJC3)
ATGGTCAAAATTGCAATTGCTGGTGGCTCTGGCGGTGTTGGCCGAGAGGT
CATCGACGCACTCATTGCTGCGAATAAGCATGAGATCATTGTCCTTACCA
GAAAGGATGCCTCAGCCAAAACTTCTATTCAAGGCATCACTTGGGTAAAG
GCCGATTACAGCGACATTACCCAATTAACCAAAGTTCTGCAAGGAGTGCA
CACTGTTCTCTCCTTCGTCACCGCGCAGGATGATCCCGCAAGCACCGTTC
AGAAGAACCTCATCGATGCCGCTGTGCAGGCCGGAGTGAAGCGCTTCGCG
CCGAGTGAATGGGCCTCATCCGGCTTAGATTACCTGGACTGGTACGCTTA
CAAAGGCGAGACGCGCCGATACCTCCAAGAGCTGAACAAGGAGAGAATGG
TCCTCGAGTATACTCTCTTCCAACCCGGCGTGTTCGTCAACTATCTGACC
CATCCACATCAATCGGCCCGCCACCTGCCCACGATCGGAACTCCCTTTGA
TTTTGCCAACCGCCGAATGATCTTGGTGGATGGGGACGATAAGGCCCGTC
TCACCTGGACGGCTGTTCAGGACCTTGCTGGAGTTGTAGCTAGAGCTGTC
GACTACGAGGGCGAGTGGCCGGTGGTTGGGGGTATCCAGGGTGCTAATAT
CTCCGTTGGCCAACTCATCACTCTGGGAGAGAAGGTTCGCGGTGGGCTGT
CCTTCACAATCGAACGGGTGAAGGCGCAGGACCTTGAAGCCGGAACGTGG
GAAACCTCATGGACACCAACAGTGGATCACGCTTCCATTCCGCCCGAGCA
GGCGGCAGTGGCTTCAAAGTATATGACCAGTCGAATTATTTTGGCGGCTG
ATGCTGGCTCCTATCTAGTCTCCGATGAATGGAACCGTCTACTGCCTGAC
TTCAAATTTACAGCCATCGAGGAGTTCTTGGCTGAGGCGTGGAAGGGAAA
GGCTTGAATGGTCAAAATTGCAATTGCTGGTGGCTCTGGCGGTGTTGGCC
GAGAGGTCATCGACGCACTCATTGCTGCGAATAAGCATGAGATCATTGTC
CTTACCAGAAAGGATGCCTCAGCCAAAACTTCTATTCAAGGCATCACTTG
GGTAAAGGCCGATTACAGCGACATTACCCAATTAACCAAAGTTCTGCAAG
GAGTGCACACTGTTCTCTCCTTCGTCACCGCGCAGGATGATCCCGCAAGC
ACCGTTCAGAAGAACCTCATCGATGCCGCTGTGCAGGCCGGAGTGAAGCG
CTTCGCGCCGAGTGAATGGGCCTCATCCGGCTTAGATTACCTGGACTGGT
ACGCTTACAAAGGCGAGACGCGCCGATACCTCCAAGAGCTGAACAAGGAG
AGAATGGTCCTCGAGTATACTCTCTTCCAACCCGGCGTGTTCGTCAACTA
TCTGACCCATCCACATCAATCGGCCCGCCACCTGCCCACGATCGGAACTC
CCTTTGATTTTGCCAACCGCCGAATGATCTTGGTGGATGGGGACGATAAG
GCCCGTCTCACCTGGACGGCTGTTCAGGACCTTGCTGGAGTTGTAGCTAG
AGCTGTCGACTACGAGGGCGAGTGGCCGGTGGTTGGGGGTATCCAGGGTG
CTAATATCTCCGTTGGCCAACTCATCACTCTGGGAGAGAAGGTTCGCGGT
GGGCTGTCCTTCACAATCGAACGGGTGAAGGCGCAGGACCTTGAAGCCGG
AACGTGGGAAACCTCATGGACACCAACAGTGGATCACGCTTCCATTCCGC
CCGAGCAGGCGGCAGTGGCTTCAAAGTATATGACCAGTCGAATTATTTTG
GCGGCTGATGCTGGCTCCTATCTAGTCTCCGATGAATGGAACCGTCTACT
GCCTGACTTCAAATTTACAGCCATCGAGGAGTTCTTGGCTGAGGCGTGGA
AGGGAAAGGCTTGAATGGTCAAAATTGCAATTGCTGGTGGCTCTGGCGGT
GTTGGCCGAGAGGTCATCGACGCACTCATTGCTGCGAATAAGCATGAGAT
CATTGTCCTTACCAGAAAGGATGCCTCAGCCAAAACTTCTATTCAAGGCA
TCACTTGGGTAAAGGCCGATTACAGCGACATTACCCAATTAACCAAAGTT
CTGCAAGGAGTGCACACTGTTCTCTCCTTCGTCACCGCGCAGGATGATCC
CGCAAGCACCGTTCAGAAGAACCTCATCGATGCCGCTGTGCAGGCCGGAG
TGAAGCGCTTCGCGCCGAGTGAATGGGCCTCATCCGGCTTAGATTACCTG
GACTGGTACGCTTACAAAGGCGAGACGCGCCGATACCTCCAAGAGCTGAA
CAAGGAGAGAATGGTCCTCGAGTATACTCTCTTCCAACCCGGCGTGTTCG
TCAACTATCTGACCCATCCACATCAATCGGCCCGCCACCTGCCCACGATC
GGAACTCCCTTTGATTTTGCCAACCGCCGAATGATCTTGGTGGATGGGGA
CGATAAGGCCCGTCTCACCTGGACGGCTGTTCAGGACCTTGCTGGAGTTG
TAGCTAGAGCTGTCGACTACGAGGGCGAGTGGCCGGTGGTTGGGGGTATC
CAGGGTGCTAATATCTCCGTTGGCCAACTCATCACTCTGGGAGAGAAGGT
TCGCGGTGGGCTGTCCTTCACAATCGAACGGGTGAAGGCGCAGGACCTTG
AAGCCGGAACGTGGGAAACCTCATGGACACCAACAGTGGATCACGCTTCC
ATTCCGCCCGAGCAGGCGGCAGTGGCTTCAAAGTATATGACCAGTCGAAT
TATTTTGGCGGCTGATGCTGGCTCCTATCTAGTCTCCGATGAATGGAACC
GTCTACTGCCTGACTTCAAATTTACAGCCATCGAGGAGTTCTTGGCTGAG
GCGTGGAAGGGAAAGGCTTGAATGGTCAAAATTGCAATTGCTGGTGGCTC
TGGCGGTGTTGGCCGAGAGGTCATCGACGCACTCATTGCTGCGAATAAGC
ATGAGATCATTGTCCTTACCAGAAAGGATGCCTCAGCCAAAACTTCTATT
CAAGGCATCACTTGGGTAAAGGCCGATTACAGCGACATTACCCAATTAAC
CAAAGTTCTGCAAGGAGTGCACACTGTTCTCTCCTTCGTCACCGCGCAGG
ATGATCCCGCAAGCACCGTTCAGAAGAACCTCATCGATGCCGCTGTGCAG
GCCGGAGTGAAGCGCTTCGCGCCGAGTGAATGGGCCTCATCCGGCTTAGA
TTACCTGGACTGGTACGCTTACAAAGGCGAGACGCGCCGATACCTCCAAG
AGCTGAACAAGGAGAGAATGGTCCTCGAGTATACTCTCTTCCAACCCGGC
GTGTTCGTCAACTATCTGACCCATCCACATCAATCGGCCCGCCACCTGCC
CACGATCGGAACTCCCTTTGATTTTGCCAACCGCCGAATGATCTTGGTGG
ATGGGGACGATAAGGCCCGTCTCACCTGGACGGCTGTTCAGGACCTTGCT
GGAGTTGTAGCTAGAGCTGTCGACTACGAGGGCGAGTGGCCGGTGGTTGG
GGGTATCCAGGGTGCTAATATCTCCGTTGGCCAACTCATCACTCTGGGAG
AGAAGGTTCGCGGTGGGCTGTCCTTCACAATCGAACGGGTGAAGGCGCAG
GACCTTGAAGCCGGAACGTGGGAAACCTCATGGACACCAACAGTGGATCA
CGCTTCCATTCCGCCCGAGCAGGCGGCAGTGGCTTCAAAGTATATGACCA
GTCGAATTATTTTGGCGGCTGATGCTGGCTCCTATCTAGTCTCCGATGAA
TGGAACCGTCTACTGCCTGACTTCAAATTTACAGCCATCGAGGAGTTCTT
GGCTGAGGCGTGGAAGGGAAAGGCTTGAATGGTCAAAATTGCAATTGCTG
GTGGCTCTGGCGGTGTTGGCCGAGAGGTCATCGACGCACTCATTGCTGCG
AATAAGCATGAGATCATTGTCCTTACCAGAAAGGATGCCTCAGCCAAAAC
TTCTATTCAAGGCATCACTTGGGTAAAGGCCGATTACAGCGACATTACCC
AATTAACCAAAGTTCTGCAAGGAGTGCACACTGTTCTCTCCTTCGTCACC
GCGCAGGATGATCCCGCAAGCACCGTTCAGAAGAACCTCATCGATGCCGC
TGTGCAGGCCGGAGTGAAGCGCTTCGCGCCGAGTGAATGGGCCTCATCCG
GCTTAGATTACCTGGACTGGTACGCTTACAAAGGCGAGACGCGCCGATAC
CTCCAAGAGCTGAACAAGGAGAGAATGGTCCTCGAGTATACTCTCTTCCA
ACCCGGCGTGTTCGTCAACTATCTGACCCATCCACATCAATCGGCCCGCC
ACCTGCCCACGATCGGAACTCCCTTTGATTTTGCCAACCGCCGAATGATC
TTGGTGGATGGGGACGATAAGGCCCGTCTCACCTGGACGGCTGTTCAGGA
CCTTGCTGGAGTTGTAGCTAGAGCTGTCGACTACGAGGGCGAGTGGCCGG
TGGTTGGGGGTATCCAGGGTGCTAATATCTCCGTTGGCCAACTCATCACT
CTGGGAGAGAAGGTTCGCGGTGGGCTGTCCTTCACAATCGAACGGGTGAA
GGCGCAGGACCTTGAAGCCGGAACGTGGGAAACCTCATGGACACCAACAG
TGGATCACGCTTCCATTCCGCCCGAGCAGGCGGCAGTGGCTTCAAAGTAT
ATGACCAGTCGAATTATTTTGGCGGCTGATGCTGGCTCCTATCTAGTCTC
CGATGAATGGAACCGTCTACTGCCTGACTTCAAATTTACAGCCATCGAGG
AGTTCTTGGCTGAGGCGTGGAAGGGAAAGGCTTGAATGGTCAAAATTGCA
ATTGCTGGTGGCTCTGGCGGTGTTGGCCGAGAGGTCATCGACGCACTCAT
TGCTGCGAATAAGCATGAGATCATTGTCCTTACCAGAAAGGATGCCTCAG
CCAAAACTTCTATTCAAGGCATCACTTGGGTAAAGGCCGATTACAGCGAC
ATTACCCAATTAACCAAAGTTCTGCAAGGAGTGCACACTGTTCTCTCCTT
CGTCACCGCGCAGGATGATCCCGCAAGCACCGTTCAGAAGAACCTCATCG
ATGCCGCTGTGCAGGCCGGAGTGAAGCGCTTCGCGCCGAGTGAATGGGCC
TCATCCGGCTTAGATTACCTGGACTGGTACGCTTACAAAGGCGAGACGCG
CCGATACCTCCAAGAGCTGAACAAGGAGAGAATGGTCCTCGAGTATACTC
TCTTCCAACCCGGCGTGTTCGTCAACTATCTGACCCATCCACATCAATCG
GCCCGCCACCTGCCCACGATCGGAACTCCCTTTGATTTTGCCAACCGCCG
AATGATCTTGGTGGATGGGGACGATAAGGCCCGTCTCACCTGGACGGCTG
TTCAGGACCTTGCTGGAGTTGTAGCTAGAGCTGTCGACTACGAGGGCGAG
TGGCCGGTGGTTGGGGGTATCCAGGGTGCTAATATCTCCGTTGGCCAACT
CATCACTCTGGGAGAGAAGGTTCGCGGTGGGCTGTCCTTCACAATCGAAC
GGGTGAAGGCGCAGGACCTTGAAGCCGGAACGTGGGAAACCTCATGGACA
CCAACAGTGGATCACGCTTCCATTCCGCCCGAGCAGGCGGCAGTGGCTTC
AAAGTATATGACCAGTCGAATTATTTTGGCGGCTGATGCTGGCTCCTATC
TAGTCTCCGATGAATGGAACCGTCTACTGCCTGACTTCAAATTTACAGCC
ATCGAGGAGTTCTTGGCTGAGGCGTGGAAGGGAAAGGCTTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002446-T1.utr5p1 | KJC3_002446-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002446-T1.utr3p1 | KJC3_002446-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_2.11 |
| Note | SMCOG1199:NmrA family protein |
| DBxref | InterPro:IPR036291 |
| DBxref | InterPro:IPR008030 |
| DBxref | PFAM:PF05368 |
| DBxref | PFAM:PF13460 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:2596105..2597793 + |
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