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KJC3_002447-T1, KJC3_002447-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_002447-T1
Unique NameKJC3_002447-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:2597832..2600239+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_002447-T1 ID=KJC3_002447-T1|Name=KJC3_002447-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2408bp|location=Sequence derived from alignment at ch2:2597832..2600239+ (Aspergillus niger KJC3)
TCGCTCTTCCAAATCAAATTCCCTCACCCTTGAATCGAGGATACACTAGA
CCTATTTGCCAATGATTGAAATAGACCAGGAGGAGGGTCCCCAGACAAAG
CGGAGAAAAGTCCGCAAGGGCACGCGAAGTTGCTGGGAGTGTAAGCGGCG
CAAGGTCCGGTGCATCTTTAGCTCCCCCACCGGCACTATCTGCGATAACT
GCAGACGACGGGGATCTACATGCATCAGCCAGGAGCTCCCAGACAGCCCA
ATATTTACAAGCAATGACTCGGTTGATGCTCGACTCGACCGAGTGGAGAG
GTTCCTCGCACAGCTGGTTAGCCCGGGCGCTACCCAAGCTGTATCTTCCG
AAGATCATTCCGAAACTCCACCGACTTCTGGGACGTTAGACAATCATACG
GAATCTAATCAAGAAGAACATGTGAGTACAGTTCTGACATATACATTCTA
ATTACCCAGAGCTGACGCCCCAGGAGCCGTTACCAGTTAACAGCATCACC
ACCGGCCAATATGCATGCATAAATCGCGACCTTCTCGAGGCATGGCCCAG
CCAGAGGGAGCTGAACCATATCTTCACCCTCCCTGTTGGAATATCAACGT
ACATGAGCTATGGAATCTGCGCCCCTAACTTTACCTCCACAAACCATGAC
CTACCGTCATCCAAAGAAATGCTCCAACTACCTCCACCGACCTCCCACCC
CGTCCTAATCGCCCGCAAACTACTCACCCTGGGCATCTTCCTCCAAGGCA
TTCCCCCATCCTCCATCCAAGCCCTAGCCGACCTATCCATCTCCCACCAC
GACATCATGTCCCGCGTCGTCGCCTGCGCCACCAGACTAGTAACGACCAA
CGATGAACTCACCCCTTCCATCGAAGGCGTGCAATGCATCATGCTCGAAG
CCCAATACCAGAACTTTGCCGGCAACCTGCATCAAGCATGGCTGGCCACT
CGCAGAGCCACAGCCATCGCACAAATGCTGTCTCTCCACCGTGGACTCTC
ACCATCATCCCTAAAGACTCTCGACCCAGCCACCCGCAACACCCTAAACC
CAGACTACCTGTGCTTCCGCCTCGTCGAAATGGACCATTACCTCTCCCTG
ATGCTCGGCCTCCCGCCCACCTCCCTTGAGGCACGGTATCTCTCCCCAAA
AGCCCTAGAGACATGCACGCCGCAAGACCGCATGCACCGCATGCACTGCA
TCGTGGCAGGACGCATACTCCACCGCACAGACGGCGACATCAACAACCTC
TCCCTCACTCAGGATATTGACTCCATGCTCCAGAACGCAGCTGCTCAAAT
GCCTCCCCAGTGGTGGCTCATTCCAGACCTATTACCCAGCCATACTCCCA
AAGACATCATCCACAACACCCTCCGTCTTACTCACCACTTCACGCACTAC
CAACTCCTCCTCCGCCTGCACCTGCCCTACATGCTCCGCTCATCCCAAGA
TACTACGGTCTATGACCAAAGCAAACTCACCATCATAACCGTAAGTCGCG
AGATTCTCTCCCGATACATCCATTTCCGCACCTCGGATCCAGCCCAGTAT
TACTGCCGTGGGGTGGATTTCATTGCTTTTGTAGCGACTACAGTGCTGTG
TATTGCGCACATAGACTCCCCCAGCAATATGCAGCACGGGAAGGGAACAA
TAGCCACCTTCCTCGCGCATAGCCGACCGAGTGACCACGGAATGATGGAA
CGAGCACATTCTATGATTGAAGATATGGCGGGCTCAGGGCCAGGGACGGA
TGAGATTGCGGGGAAGCTGGCAGGTATAATGAGACATTTGTTGGGGGTGG
AGGAGAGTGCTGCTGGGGGTGTTGGGTATGTGGCTAGGGAGGGGAATGAG
GATAAGAAGGGAGGAGGAGGGGAGTATGATGGAAGGGTAGGGGATGGAGG
GACTAGTTTGCATGTTTATATCCCGTATTATGGGACGATCGGCTTTGAGA
GGAGTGAGGAGAGCGACATAGGGGAAGGTAATGGTGGTGGTGGTAGTGAA
GGGTGGGATTTGCAGGGTGTCGATGTGGCGCTGTTTAACAGTTTGTTCCG
GGATATGGCGGTTCCTGATATTGGGGAGGAGAGGTGGGAGGAGTGGGTTG
GTGTGTAGGAGATATATAGGTTATCAGCATCTCTAGTTCCCACATGTTCC
CTCCACTATGCCTCCATCATGATGTCCTTTTTAATGTATCCCAAATGACC
CTCACCAATCCTCTGCAGAGATCAAACAGCATTCCACATATCCCACCCCG
AAACAAGGGTACTAACCACCATCCCAATCCCCACCCCCAACTGGCCCATT
TCAATCCATCCCAGAAAGGTCCCAGGAATGAGCATATCACATGCATCAAC
ACAGAGCATTTTCTTCAGGAGAGAGAAGCGGTCGATAGAGGGTGCTTGCT
TCTTCTCA
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Coding sequence (CDS) from alignment at ch2:2597832..2600239+

>KJC3_002447-T1 ID=KJC3_002447-T1|Name=KJC3_002447-T1|organism=Aspergillus niger KJC3|type=CDS|length=3984bp|location=Sequence derived from alignment at ch2:2597832..2600239+ (Aspergillus niger KJC3)
ATGATTGAAATAGACCAGGAGGAGGGTCCCCAGACAAAGCGGAGAAAAGT
CCGCAAGGGCACGCGAAGTTGCTGGGAGTGTAAGCGGCGCAAGGTCCGGT
GCATCTTTAGCTCCCCCACCGGCACTATCTGCGATAACTGCAGACGACGG
GGATCTACATGCATCAGCCAGGAGCTCCCAGACAGCCCAATATTTACAAG
CAATGACTCGGTTGATGCTCGACTCGACCGAGTGGAGAGGTTCCTCGCAC
AGCTGGTTAGCCCGGGCGCTACCCAAGCTGTATCTTCCGAAGATCATTCC
GAAACTCCACCGACTTCTGGGACGTTAGACAATCATACGGAATCTAATCA
AGAAGAACATCCGTTACCAGTTAACAGCATCACCACCGGCCAATATGCAT
GCATAAATCGCGACCTTCTCGAGGCATGGCCCAGCCAGAGGGAGCTGAAC
CATATCTTCACCCTCCCTGTTGGAATATCAACGTACATGAGCTATGGAAT
CTGCGCCCCTAACTTTACCTCCACAAACCATGACCTACCGTCATCCAAAG
AAATGCTCCAACTACCTCCACCGACCTCCCACCCCGTCCTAATCGCCCGC
AAACTACTCACCCTGGGCATCTTCCTCCAAGGCATTCCCCCATCCTCCAT
CCAAGCCCTAGCCGACCTATCCATCTCCCACCACGACATCATGTCCCGCG
TCGTCGCCTGCGCCACCAGACTAGTAACGACCAACGATGAACTCACCCCT
TCCATCGAAGGCGTGCAATGCATCATGCTCGAAGCCCAATACCAGAACTT
TGCCGGCAACCTGCATCAAGCATGGCTGGCCACTCGCAGAGCCACAGCCA
TCGCACAAATGCTGTCTCTCCACCGTGGACTCTCACCATCATCCCTAAAG
ACTCTCGACCCAGCCACCCGCAACACCCTAAACCCAGACTACCTGTGCTT
CCGCCTCGTCGAAATGGACCATTACCTCTCCCTGATGCTCGGCCTCCCGC
CCACCTCCCTTGAGGCACGGTATCTCTCCCCAAAAGCCCTAGAGACATGC
ACGCCGCAAGACCGCATGCACCGCATGCACTGCATCGTGGCAGGACGCAT
ACTCCACCGCACAGACGGCGACATCAACAACCTCTCCCTCACTCAGGATA
TTGACTCCATGCTCCAGAACGCAGCTGCTCAAATGCCTCCCCAGTGGTGG
CTCATTCCAGACCTATTACCCAGCCATACTCCCAAAGACATCATCCACAA
CACCCTCCGTCTTACTCACCACTTCACGCACTACCAACTCCTCCTCCGCC
TGCACCTGCCCTACATGCTCCGCTCATCCCAAGATACTACGGTCTATGAC
CAAAGCAAACTCACCATCATAACCGTAAGTCGCGAGATTCTCTCCCGATA
CATCCATTTCCGCACCTCGGATCCAGCCCAGTATTACTGCCGTGGGGTGG
ATTTCATTGCTTTTGTAGCGACTACAGTGCTGTGTATTGCGCACATAGAC
TCCCCCAGCAATATGCAGCACGGGAAGGGAACAATAGCCACCTTCCTCGC
GCATAGCCGACCGAGTGACCACGGAATGATGGAACGAGCACATTCTATGA
TTGAAGATATGGCGGGCTCAGGGCCAGGGACGGATGAGATTGCGGGGAAG
CTGGCAGGTATAATGAGACATTTGTTGGGGGTGGAGGAGAGTGCTGCTGG
GGGTGTTGGGTATGTGGCTAGGGAGGGGAATGAGGATAAGAAGGGAGGAG
GAGGGGAGTATGATGGAAGGGTAGGGGATGGAGGGACTAGTTTGCATGTT
TATATCCCGTATTATGGGACGATCGGCTTTGAGAGGAGTGAGGAGAGCGA
CATAGGGGAAGGTAATGGTGGTGGTGGTAGTGAAGGGTGGGATTTGCAGG
GTGTCGATGTGGCGCTGTTTAACAGTTTGTTCCGGGATATGGCGGTTCCT
GATATTGGGGAGGAGAGGTGGGAGGAGTGGGTTGGTGTGTAGATGATTGA
AATAGACCAGGAGGAGGGTCCCCAGACAAAGCGGAGAAAAGTCCGCAAGG
GCACGCGAAGTTGCTGGGAGTGTAAGCGGCGCAAGGTCCGGTGCATCTTT
AGCTCCCCCACCGGCACTATCTGCGATAACTGCAGACGACGGGGATCTAC
ATGCATCAGCCAGGAGCTCCCAGACAGCCCAATATTTACAAGCAATGACT
CGGTTGATGCTCGACTCGACCGAGTGGAGAGGTTCCTCGCACAGCTGGTT
AGCCCGGGCGCTACCCAAGCTGTATCTTCCGAAGATCATTCCGAAACTCC
ACCGACTTCTGGGACGTTAGACAATCATACGGAATCTAATCAAGAAGAAC
ATCCGTTACCAGTTAACAGCATCACCACCGGCCAATATGCATGCATAAAT
CGCGACCTTCTCGAGGCATGGCCCAGCCAGAGGGAGCTGAACCATATCTT
CACCCTCCCTGTTGGAATATCAACGTACATGAGCTATGGAATCTGCGCCC
CTAACTTTACCTCCACAAACCATGACCTACCGTCATCCAAAGAAATGCTC
CAACTACCTCCACCGACCTCCCACCCCGTCCTAATCGCCCGCAAACTACT
CACCCTGGGCATCTTCCTCCAAGGCATTCCCCCATCCTCCATCCAAGCCC
TAGCCGACCTATCCATCTCCCACCACGACATCATGTCCCGCGTCGTCGCC
TGCGCCACCAGACTAGTAACGACCAACGATGAACTCACCCCTTCCATCGA
AGGCGTGCAATGCATCATGCTCGAAGCCCAATACCAGAACTTTGCCGGCA
ACCTGCATCAAGCATGGCTGGCCACTCGCAGAGCCACAGCCATCGCACAA
ATGCTGTCTCTCCACCGTGGACTCTCACCATCATCCCTAAAGACTCTCGA
CCCAGCCACCCGCAACACCCTAAACCCAGACTACCTGTGCTTCCGCCTCG
TCGAAATGGACCATTACCTCTCCCTGATGCTCGGCCTCCCGCCCACCTCC
CTTGAGGCACGGTATCTCTCCCCAAAAGCCCTAGAGACATGCACGCCGCA
AGACCGCATGCACCGCATGCACTGCATCGTGGCAGGACGCATACTCCACC
GCACAGACGGCGACATCAACAACCTCTCCCTCACTCAGGATATTGACTCC
ATGCTCCAGAACGCAGCTGCTCAAATGCCTCCCCAGTGGTGGCTCATTCC
AGACCTATTACCCAGCCATACTCCCAAAGACATCATCCACAACACCCTCC
GTCTTACTCACCACTTCACGCACTACCAACTCCTCCTCCGCCTGCACCTG
CCCTACATGCTCCGCTCATCCCAAGATACTACGGTCTATGACCAAAGCAA
ACTCACCATCATAACCGTAAGTCGCGAGATTCTCTCCCGATACATCCATT
TCCGCACCTCGGATCCAGCCCAGTATTACTGCCGTGGGGTGGATTTCATT
GCTTTTGTAGCGACTACAGTGCTGTGTATTGCGCACATAGACTCCCCCAG
CAATATGCAGCACGGGAAGGGAACAATAGCCACCTTCCTCGCGCATAGCC
GACCGAGTGACCACGGAATGATGGAACGAGCACATTCTATGATTGAAGAT
ATGGCGGGCTCAGGGCCAGGGACGGATGAGATTGCGGGGAAGCTGGCAGG
TATAATGAGACATTTGTTGGGGGTGGAGGAGAGTGCTGCTGGGGGTGTTG
GGTATGTGGCTAGGGAGGGGAATGAGGATAAGAAGGGAGGAGGAGGGGAG
TATGATGGAAGGGTAGGGGATGGAGGGACTAGTTTGCATGTTTATATCCC
GTATTATGGGACGATCGGCTTTGAGAGGAGTGAGGAGAGCGACATAGGGG
AAGGTAATGGTGGTGGTGGTAGTGAAGGGTGGGATTTGCAGGGTGTCGAT
GTGGCGCTGTTTAACAGTTTGTTCCGGGATATGGCGGTTCCTGATATTGG
GGAGGAGAGGTGGGAGGAGTGGGTTGGTGTGTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0042025host cell nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0008270zinc ion binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_002447KJC3_002447Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002447-T1KJC3_002447-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002447-T1.utr5p1KJC3_002447-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002447-T1.exon1KJC3_002447-T1.exon1Aspergillus niger KJC3exon
KJC3_002447-T1.exon2KJC3_002447-T1.exon2Aspergillus niger KJC3exon
KJC3_002447-T1.exon3KJC3_002447-T1.exon3Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002447-T1.cdsKJC3_002447-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002447-T1.utr3p1KJC3_002447-T1.utr3p1Aspergillus niger KJC3three_prime_UTR
KJC3_002447-T1.utr3p2KJC3_002447-T1.utr3p2Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
NoteantiSMASH:Cluster_2.11
DBxrefInterPro:IPR036864
DBxrefInterPro:IPR001138
DBxrefPFAM:PF00172
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:2597832..2600239 +
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