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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:2610661..2612269+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_002453-T1 ID=KJC3_002453-T1|Name=KJC3_002453-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1609bp|location=Sequence derived from alignment at ch2:2610661..2612269+ (Aspergillus niger KJC3)
GCAAGCACCAAATTTTGGTGGTTTTGGCTTCTGTTCAGCCCGTCTTTCCG
CCTTTCTACAAACATCTTTATTCATTCTTTTGACACATTTCGAGACTCGA
TATGGATTCCATGGGGATAAATGAGTTTCGGATTGATGGGGACGTTGCTA
GGTCAATCGTAGAGAGTAGCAACGACGAACTCGAAGAGTTAACCGCGCTT
TACCACGACTCATCTGACGACGCAGATATTGAGTTATTTATCTTCGCCTG
TCTTGTTTTATTCCGCAGAACCTACTCACTCCAATGGGGTGAACAGGCAT
ATGAAAAAGCTCAGCAATGGACCGCTTCTACGCCTTTGGGTGATGGCCAG
TACAGACGACGGTTTCGAATCATGACATCAATCAAAGCCCTCGCCAATAC
TCAGGATATCATAGTTGGTGATGCATCACTACAGAGAACAATACTGAACG
ACCTATATAACGGGTCTCGATACAAAGAAACCGGGTCCGTCGAGGACCTC
ACCGATACGATCAACTTTCGAGGCACACTTTTACCTCGCATAAGGCCCAT
GTACAAACCAGACGCTGTGCTGGGCATGGCCAGGTGGCTCGTTCTACGAT
TTGAAAAAGACGAGCAATTGTATCTGGGCGACCTCAAGTCCGCGATAAAC
ATGGTTGATGCTTTGCTCTCTGCCGGAGTCCCACACCCTTTCTCGCCCGC
CCAGCTGCTAGTACAAGTCGGTGAGTGGACACACAAGCTATATGATTGCG
ACCAGGATTTGGGTACACTGGATAAATCAATTGAGACTTATCGTCATGCT
TTGCGTCTATCATTGGGGAAGGCTGAACTGCGCATAAGAATATGCTTGGA
ACTTGCAGACGCGCTTCTGGTGCGCGCGGTAAAAACGGCCAACCCAGCAG
GATTCGTGGAACCAACCACAACACTGGCGGGTCTCCTGGAGGAGCCCTCA
CTCGGTGATTTCAATCGTTCAACTGTTCTAAGCAGCTTGGCAGTTTCTGT
GTTAACGTACTTCCAATTGTCTGGAGATGTTCGCGATTTAATCCGTTCAA
TTGGGTACATGGAAATGGCTTTGAGCTGCCCTTCGTACAAGGCATCCCCC
AGGGTAGCACCCATTGAGCACCTCATTGGGACACTTACACCGCTCATAGA
GAACCTGGAAAAGCTTCCTTGCTATGACGTGGTTAGACTTCTACTCATTC
CTCTCGAGCAGCTGTGTGGTCCAAACTTTCCTCAACATTGTTGATGCGAT
ATGCGAACACGCATGATCCTGCCGATCATGAAAGAATCATACATTGCCTT
AGTGAAGGGTTGAAATGTAATCACAATGAGCCTAGGGTTCGAATAAGCAT
GGCTCAACAATTGGCATCAATGCTCATGGAGGATGCAGATTATTTGGGGG
CTTCGCGAGCACTAGAAGATGCAGTCCGTCTGTTGCCAAGGGCCTGTCCA
AGATCTTCAAGCGGCTATGACAAGCAACGCTTTTCAGCTACATGCTACGG
CCTAGGATCATTGTCTGCTGGAGTGACATTGACTACTGACAGACTACTGT
CTTTCGTCTTAGGAACTTTGGAAGCTAGCCGTGGTCTGGTGGCAGGACTG
TTCTTGGAT back to topCoding sequence (CDS) from alignment at ch2:2610661..2612269+ >KJC3_002453-T1 ID=KJC3_002453-T1|Name=KJC3_002453-T1|organism=Aspergillus niger KJC3|type=CDS|length=1143bp|location=Sequence derived from alignment at ch2:2610661..2612269+ (Aspergillus niger KJC3)
ATGGATTCCATGGGGATAAATGAGTTTCGGATTGATGGGGACGTTGCTAG
GTCAATCGTAGAGAGTAGCAACGACGAACTCGAAGAGTTAACCGCGCTTT
ACCACGACTCATCTGACGACGCAGATATTGAGTTATTTATCTTCGCCTGT
CTTGTTTTATTCCGCAGAACCTACTCACTCCAATGGGGTGAACAGGCATA
TGAAAAAGCTCAGCAATGGACCGCTTCTACGCCTTTGGGTGATGGCCAGT
ACAGACGACGGTTTCGAATCATGACATCAATCAAAGCCCTCGCCAATACT
CAGGATATCATAGTTGGTGATGCATCACTACAGAGAACAATACTGAACGA
CCTATATAACGGGTCTCGATACAAAGAAACCGGGTCCGTCGAGGACCTCA
CCGATACGATCAACTTTCGAGGCACACTTTTACCTCGCATAAGGCCCATG
TACAAACCAGACGCTGTGCTGGGCATGGCCAGGTGGCTCGTTCTACGATT
TGAAAAAGACGAGCAATTGTATCTGGGCGACCTCAAGTCCGCGATAAACA
TGGTTGATGCTTTGCTCTCTGCCGGAGTCCCACACCCTTTCTCGCCCGCC
CAGCTGCTAGTACAAGTCGGTGAGTGGACACACAAGCTATATGATTGCGA
CCAGGATTTGGGTACACTGGATAAATCAATTGAGACTTATCGTCATGCTT
TGCGTCTATCATTGGGGAAGGCTGAACTGCGCATAAGAATATGCTTGGAA
CTTGCAGACGCGCTTCTGGTGCGCGCGGTAAAAACGGCCAACCCAGCAGG
ATTCGTGGAACCAACCACAACACTGGCGGGTCTCCTGGAGGAGCCCTCAC
TCGGTGATTTCAATCGTTCAACTGTTCTAAGCAGCTTGGCAGTTTCTGTG
TTAACGTACTTCCAATTGTCTGGAGATGTTCGCGATTTAATCCGTTCAAT
TGGGTACATGGAAATGGCTTTGAGCTGCCCTTCGTACAAGGCATCCCCCA
GGGTAGCACCCATTGAGCACCTCATTGGGACACTTACACCGCTCATAGAG
AACCTGGAAAAGCTTCCTTGCTATGACGTGGTTAGACTTCTACTCATTCC
TCTCGAGCAGCTGTGTGGTCCAAACTTTCCTCAACATTGTTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002453-T1.utr5p1 | KJC3_002453-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002453-T1.utr3p1 | KJC3_002453-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_2.11 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:2610661..2612269 + |
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