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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:2612248..2613701+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_002454-T1 ID=KJC3_002454-T1|Name=KJC3_002454-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1454bp|location=Sequence derived from alignment at ch2:2612248..2613701+ (Aspergillus niger KJC3)
GGTGGCAGGACTGTTCTTGGATGCACGGACAGATCTCTCCGGACTCAGGC
GCGAGCACCCTGAACTTGCGAAAGAGTTCGGAAAAATCGGGGCGGAGCTT
AACAGAGACTCTAGCAATATTCAAAGGCGTTTTAAATTCGGCGCACAGAA
TGAAATTATCATGCAGGACAACATCGAATTGAATCGGGGCATCCAGTTAC
AACGCGAGTTTGATGACCTTGTCGAAACGATCCGTGAGAAAAATTGGATT
CTCTGAATTTCTCCTTCCTCCTACCCTGGATGAAATGATGGCTACAGCAT
GTCACGGTCCGATTGTAGTCATCAATCTTTGTTCCTTTCGTTCGGAAGCC
ATTATAATCCAGAAAAACCATCTCGGTTCTGTCAGGTTACCTCATCTACA
AAACATGAATGTGAACGTTCTCGTCAAGAAGCTCATCAACATGAACTCAT
ATGAACTACATACCTCACAATTCTTACCTCTGCTACTTGCATGCCTCTGT
TTTGCGCTTGCTCGTCCTGTCTTGGATTATCTGGGATATACACATCCCCC
AGAGCAGGGAGGACGTTGGCCACACATTTGGTGGATTCCTACCGGGGAAG
CGGTATATTTTCCCATTCATGCTGCTGGTGTTCATGACAAAGATACTGGC
GAGACAGTGATGGACAGAGTCGTCTCATCCTACGCATCCTCGATCAGATC
ACTCATCCACAGTCGCCGAGGAGCTCTCCCCAAAACCCCTTCTAGAACCA
AAAATCCACCACAAGCTTTTCTCGTCTCTATGCCTAAAACACCAAATCAG
TCCTCCCTCCCATTTGCCGTCAATGAGATCACCACCATTAAGCCTCTCAT
CCAAGATATGGGCCTGACAACCACACACTGCGAAAGCGAAGACACGAACG
AGGTCCTTAAATCAATGAAAAACAGCACCATCCTGCACTTCGCAGGCCAC
GGAATATCCCACGCCAGCGACCCAACCCAGAGTTGCCTACTCACTCAAGA
TTGGACCACCAATCCATTGACCGTCGAAAGGCTCAGACAAGAGAACTTAC
AAGACACATCTCCGTTCCTCGCCTATCTCTCATCCTGCTCTACTGGAGCG
AACAAAAACCTTAAGCTTGCTGACGAGACAATCCATCTTGTAAATGCTTG
CCAGCTGGCGGGGTTTCGACACGCCATTGGGGCACTCTGGGAAGTGTCAG
ATCAGCATTGTGTCGAGGTAGCAAGGGGTGTGTATGAGACCTTGAAGGAA
GAGGGTTTGACCGATGAGGCTGTGGCTAGGGGCTGCATAGGGCTACTCGG
AGGGTGCGTGATAGTTGTCGCGATGTGACGATGAGGAATGGGCTGTCCAC
GGAGAATAAAGAGAAGGTTGATTTGAGGGCGACATAGATAAGCAGTTGGG
TTATTTGGAACGAGAGTTCAGAGTGTTGGGGATAGATGCCAAGGATGACC
GGGA back to topCoding sequence (CDS) from alignment at ch2:2612248..2613701+ >KJC3_002454-T1 ID=KJC3_002454-T1|Name=KJC3_002454-T1|organism=Aspergillus niger KJC3|type=CDS|length=1116bp|location=Sequence derived from alignment at ch2:2612248..2613701+ (Aspergillus niger KJC3)
ATGACCTTGTCGAAACGATCCGTGAGAAAAATTGGATTCTCTGAATTTCT
CCTTCCTCCTACCCTGGATGAAATGATGGCTACAGCATGTCACGGTCCGA
TTGTAGTCATCAATCTTTGTTCCTTTCGTTCGGAAGCCATTATAATCCAG
AAAAACCATCTCGGTTCTGTCAGGTTACCTCATCTACAAAACATGAATGT
GAACGTTCTCGTCAAGAAGCTCATCAACATGAACTCATATGAACTACATA
CCTCACAATTCTTACCTCTGCTACTTGCATGCCTCTGTTTTGCGCTTGCT
CGTCCTGTCTTGGATTATCTGGGATATACACATCCCCCAGAGCAGGGAGG
ACGTTGGCCACACATTTGGTGGATTCCTACCGGGGAAGCGGTATATTTTC
CCATTCATGCTGCTGGTGTTCATGACAAAGATACTGGCGAGACAGTGATG
GACAGAGTCGTCTCATCCTACGCATCCTCGATCAGATCACTCATCCACAG
TCGCCGAGGAGCTCTCCCCAAAACCCCTTCTAGAACCAAAAATCCACCAC
AAGCTTTTCTCGTCTCTATGCCTAAAACACCAAATCAGTCCTCCCTCCCA
TTTGCCGTCAATGAGATCACCACCATTAAGCCTCTCATCCAAGATATGGG
CCTGACAACCACACACTGCGAAAGCGAAGACACGAACGAGGTCCTTAAAT
CAATGAAAAACAGCACCATCCTGCACTTCGCAGGCCACGGAATATCCCAC
GCCAGCGACCCAACCCAGAGTTGCCTACTCACTCAAGATTGGACCACCAA
TCCATTGACCGTCGAAAGGCTCAGACAAGAGAACTTACAAGACACATCTC
CGTTCCTCGCCTATCTCTCATCCTGCTCTACTGGAGCGAACAAAAACCTT
AAGCTTGCTGACGAGACAATCCATCTTGTAAATGCTTGCCAGCTGGCGGG
GTTTCGACACGCCATTGGGGCACTCTGGGAAGTGTCAGATCAGCATTGTG
TCGAGGTAGCAAGGGGTGTGTATGAGACCTTGAAGGAAGAGGGTTTGACC
GATGAGGCTGTGGCTAGGGGCTGCATAGGGCTACTCGGAGGGTGCGTGAT
AGTTGTCGCGATGTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002454-T1.utr5p1 | KJC3_002454-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002454-T1.utr3p1 | KJC3_002454-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR024983 |
| DBxref | PFAM:PF12770 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:2612248..2613701 + |
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