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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:2635117..2636561+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_002465-T1 ID=KJC3_002465-T1|Name=KJC3_002465-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1445bp|location=Sequence derived from alignment at ch2:2635117..2636561+ (Aspergillus niger KJC3)
TGCGGCATTGCGAATTCTTTCTTTCACCACCCCCTCTACCATCGTTGGCC
GTGTCCAACAACACTTCACAATGGCAATCACCAAGTCTTCCTCCATTTTG
ATTGTTGGTGCGGGCACCTGGGGCTGCTCGACTGCCCTGCACCTGGCTCG
CAGGGGCTACACCAATGTGACTGTCTTGGATCCCTACCCTGTCCCCTCCG
CTATTTCCGCAGGAAACGACGTCAACAAAGTCATATCCTCTGGCCAATAC
AGCAACAGAAAAGATGAGATTGAGGTGAACGAGATTCTCGGGGAACAAGC
CTTCCAAGGATGGAAGAACGACCCTCTCTTCCAGCCATACTACCACGATG
TCGGCCTGCTCATGTCGGCGTGCACATCAGCTGGCCTGGACCGCCTTGGT
GTCCGAGTGAGGCCCGAAGCCGACCCGAACTTGGTGGAGATGTCGCGGCC
AGATCAATTCCGTGATCTTGCTCCTGCTGTGCTCAAGGGAGATTTCCCGG
GCTGGAAGGGTTACTTCCTTCGCTCTGGTGCCGGCTGGGCTCATGCCCGG
AATGCTCTGGTCGCTGCCGCCAAGGAAGCACAGAGGCTCGGTGTCAAGTT
CGTTGCTGGTTCGCCTGCAGGCAGGGTCATCACCTTGATTTTCGAAAACA
ACGATGTGAAGGGTGCCGTAACTGCTGATGGCAAAATCTGGCGCGCGGAA
CAGACGATCCTGTGTGCTGGTGCAAGTGCAGGACAATTCTTAGACTTCAA
GGACCAGCTGCGCCCAACGGCCTGGACGCTCGTGCACATCGCTCTGAAGC
CGGAGGAGCGCGCACTCTACAAGGACATGCCCGTCATCTTCAATATCGAA
AAGGGCTTCTTCTTTGAGCCGGATGAGGAGCGCGGGGAGATCAAAATCTG
CGATGAACATCCAGGATACACAAACATGGTCCGGTCACAAGATGGCAAGC
TTCAAAGTCTTCCGTTCGAGAAAACACAAGTGCCCTTGGAGTCCGAGAAG
AGGGTCCGCGCACTTCTCAGAGAAACTGTGCCTCAATTGGCAGATCGTCC
GTTCAGCTTTGCGAGAATTTGCTGGTGTGCAGACACCGCTAACCGCGAAT
TCATCATTGACCGTCACCCACAGCACAAATCACTGATTCTGGGATGCGGT
GCTTCTGGCCGAGGTAAGACGTCATGGCCCTGACCGAGATGCGTTTCCGC
TACTAACCCGCACCTTTAAAATAGGCTACAAATACCTACCATCCATCGGA
AGTCTCATTGTTGACGCCATGGAGGGCAAAGTCCCTCAGAAGGTCCACGA
TCTCATCAAGTGGAGCCCAGAAATTGCTTCGGATAGAAACTGGAGCGACA
CTTTGGGACGGTTTGGAGGGCCCAACAGGGTGATGGACTTCCACGATGTC
AAGGAATGGACCAATGTACAGCATAGGGACATTTCCAAGTTGTAA back to topCoding sequence (CDS) from alignment at ch2:2635117..2636561+ >KJC3_002465-T1 ID=KJC3_002465-T1|Name=KJC3_002465-T1|organism=Aspergillus niger KJC3|type=CDS|length=2628bp|location=Sequence derived from alignment at ch2:2635117..2636561+ (Aspergillus niger KJC3)
ATGGCAATCACCAAGTCTTCCTCCATTTTGATTGTTGGTGCGGGCACCTG
GGGCTGCTCGACTGCCCTGCACCTGGCTCGCAGGGGCTACACCAATGTGA
CTGTCTTGGATCCCTACCCTGTCCCCTCCGCTATTTCCGCAGGAAACGAC
GTCAACAAAGTCATATCCTCTGGCCAATACAGCAACAGAAAAGATGAGAT
TGAGGTGAACGAGATTCTCGGGGAACAAGCCTTCCAAGGATGGAAGAACG
ACCCTCTCTTCCAGCCATACTACCACGATGTCGGCCTGCTCATGTCGGCG
TGCACATCAGCTGGCCTGGACCGCCTTGGTGTCCGAGTGAGGCCCGAAGC
CGACCCGAACTTGGTGGAGATGTCGCGGCCAGATCAATTCCGTGATCTTG
CTCCTGCTGTGCTCAAGGGAGATTTCCCGGGCTGGAAGGGTTACTTCCTT
CGCTCTGGTGCCGGCTGGGCTCATGCCCGGAATGCTCTGGTCGCTGCCGC
CAAGGAAGCACAGAGGCTCGGTGTCAAGTTCGTTGCTGGTTCGCCTGCAG
GCAGGGTCATCACCTTGATTTTCGAAAACAACGATGTGAAGGGTGCCGTA
ACTGCTGATGGCAAAATCTGGCGCGCGGAACAGACGATCCTGTGTGCTGG
TGCAAGTGCAGGACAATTCTTAGACTTCAAGGACCAGCTGCGCCCAACGG
CCTGGACGCTCGTGCACATCGCTCTGAAGCCGGAGGAGCGCGCACTCTAC
AAGGACATGCCCGTCATCTTCAATATCGAAAAGGGCTTCTTCTTTGAGCC
GGATGAGGAGCGCGGGGAGATCAAAATCTGCGATGAACATCCAGGATACA
CAAACATGGTCCGGTCACAAGATGGCAAGCTTCAAAGTCTTCCGTTCGAG
AAAACACAAGTGCCCTTGGAGTCCGAGAAGAGGGTCCGCGCACTTCTCAG
AGAAACTGTGCCTCAATTGGCAGATCGTCCGTTCAGCTTTGCGAGAATTT
GCTGGTGTGCAGACACCGCTAACCGCGAATTCATCATTGACCGTCACCCA
CAGCACAAATCACTGATTCTGGGATGCGGTGCTTCTGGCCGAGGCTACAA
ATACCTACCATCCATCGGAAGTCTCATTGTTGACGCCATGGAGGGCAAAG
TCCCTCAGAAGGTCCACGATCTCATCAAGTGGAGCCCAGAAATTGCTTCG
GATAGAAACTGGAGCGACACTTTGGGACGGTTTGGAGGGCCCAACAGGGT
GATGGACTTCCACGATGTCAAGGAATGGACCAATGTACAGCATAGGGACA
TTTCCAAGTTGTAAATGGCAATCACCAAGTCTTCCTCCATTTTGATTGTT
GGTGCGGGCACCTGGGGCTGCTCGACTGCCCTGCACCTGGCTCGCAGGGG
CTACACCAATGTGACTGTCTTGGATCCCTACCCTGTCCCCTCCGCTATTT
CCGCAGGAAACGACGTCAACAAAGTCATATCCTCTGGCCAATACAGCAAC
AGAAAAGATGAGATTGAGGTGAACGAGATTCTCGGGGAACAAGCCTTCCA
AGGATGGAAGAACGACCCTCTCTTCCAGCCATACTACCACGATGTCGGCC
TGCTCATGTCGGCGTGCACATCAGCTGGCCTGGACCGCCTTGGTGTCCGA
GTGAGGCCCGAAGCCGACCCGAACTTGGTGGAGATGTCGCGGCCAGATCA
ATTCCGTGATCTTGCTCCTGCTGTGCTCAAGGGAGATTTCCCGGGCTGGA
AGGGTTACTTCCTTCGCTCTGGTGCCGGCTGGGCTCATGCCCGGAATGCT
CTGGTCGCTGCCGCCAAGGAAGCACAGAGGCTCGGTGTCAAGTTCGTTGC
TGGTTCGCCTGCAGGCAGGGTCATCACCTTGATTTTCGAAAACAACGATG
TGAAGGGTGCCGTAACTGCTGATGGCAAAATCTGGCGCGCGGAACAGACG
ATCCTGTGTGCTGGTGCAAGTGCAGGACAATTCTTAGACTTCAAGGACCA
GCTGCGCCCAACGGCCTGGACGCTCGTGCACATCGCTCTGAAGCCGGAGG
AGCGCGCACTCTACAAGGACATGCCCGTCATCTTCAATATCGAAAAGGGC
TTCTTCTTTGAGCCGGATGAGGAGCGCGGGGAGATCAAAATCTGCGATGA
ACATCCAGGATACACAAACATGGTCCGGTCACAAGATGGCAAGCTTCAAA
GTCTTCCGTTCGAGAAAACACAAGTGCCCTTGGAGTCCGAGAAGAGGGTC
CGCGCACTTCTCAGAGAAACTGTGCCTCAATTGGCAGATCGTCCGTTCAG
CTTTGCGAGAATTTGCTGGTGTGCAGACACCGCTAACCGCGAATTCATCA
TTGACCGTCACCCACAGCACAAATCACTGATTCTGGGATGCGGTGCTTCT
GGCCGAGGCTACAAATACCTACCATCCATCGGAAGTCTCATTGTTGACGC
CATGGAGGGCAAAGTCCCTCAGAAGGTCCACGATCTCATCAAGTGGAGCC
CAGAAATTGCTTCGGATAGAAACTGGAGCGACACTTTGGGACGGTTTGGA
GGGCCCAACAGGGTGATGGACTTCCACGATGTCAAGGAATGGACCAATGT
ACAGCATAGGGACATTTCCAAGTTGTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055114 | oxidation-reduction process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0016491 | oxidoreductase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002465-T1.utr5p1 | KJC3_002465-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR006076 |
| DBxref | InterPro:IPR036188 |
| DBxref | PFAM:PF01266 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:2635117..2636561 + |
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