You are here

KJC3_002474-T1, KJC3_002474-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_002474-T1
Unique NameKJC3_002474-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:2656700..2657728+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_002474-T1 ID=KJC3_002474-T1|Name=KJC3_002474-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1029bp|location=Sequence derived from alignment at ch2:2656700..2657728+ (Aspergillus niger KJC3)
ATGAGAACCCAGAAACACCTCCACATCGCCGTTCTGGATACGGACGCTCC GGTTCCGAACGTCTACTACGCTCGCGGTCTTTATAGTACCCAATTTCGCA AGCTTCTTCGCGCTGCTGCGGGGCGGATCGCAGAAGACGAAGGACGAGAT GAAGATATTGAAATCCACACCACGGCGTTTGATACGCTTGGTGGTCAGTT GCCGTCGCTGGCTAGTTTGAGTACGCAGCCTACTACCCTTGTGACCAAGG CTGGAGAGGTGATCAATCCGCTGGCTTTGCCTATCACCGGAATCTTGATT ACGGGATCAGTGGCGTCCACGTATGGTGCAGAGTACCAGTCATGGGTTGC ACCATTGCTGGAGTTTATTACTACTGTATATGAACAGTATCCTCATGTGC GGATCTTTGGAAGTTGTTTTGGCCACCAGGCGCTTGCAGACGCCTTGCTT GCTGGATCTGCTTCGGCCAATGAGGTCAAGGTGGGATGTTGTCCCTATGG GAAAGAGGCAGGCCTGGCGCAAGTCGAACTCACAGAGGGATTTGTGGATG CCTTTCCCTGCTTGAGAGGAAAACGCACGTTGAGGCTGCAGATGATTCAT GGGGATTGGGTGACGGTTGAGTCGTCACCTGAGAAAGCGCTTCCCTCGCC TTGGATGAACATCGGGGGGACAAAGCCTTGTCCTATTCAGGGCTTGTATT GCCCTGGGCGTGTTCTGTCCTATCAAGGGCACTTTGAATTCGACTCGTTT GTCAACAGAGAGACGTGTGTTGACTTTGGCGGGAGGCTGGGTTGGCCGAA AGAGCTTATCGAGCAGTATGTGACGGCAATTGGTGATGTGGACGGGAATG GGGATGACTCCAAGCTAGCCGCAGAGGTGCTGGTGAGATTCTTTGCGGGA GAAGATGATACGCAAAGCAAGGAAGGCATGGACAAGGCACGGGGTGAACA GAGTGTGGGAGTAGGCAAACTAATTGGAAGTCTGGTGGAGCAGTTGATAG GTGGGAACTGGTGGTCCAGCAAGGCATAA
back to top

Coding sequence (CDS) from alignment at ch2:2656700..2657728+

>KJC3_002474-T1 ID=KJC3_002474-T1|Name=KJC3_002474-T1|organism=Aspergillus niger KJC3|type=CDS|length=1029bp|location=Sequence derived from alignment at ch2:2656700..2657728+ (Aspergillus niger KJC3)
ATGAGAACCCAGAAACACCTCCACATCGCCGTTCTGGATACGGACGCTCC
GGTTCCGAACGTCTACTACGCTCGCGGTCTTTATAGTACCCAATTTCGCA
AGCTTCTTCGCGCTGCTGCGGGGCGGATCGCAGAAGACGAAGGACGAGAT
GAAGATATTGAAATCCACACCACGGCGTTTGATACGCTTGGTGGTCAGTT
GCCGTCGCTGGCTAGTTTGAGTACGCAGCCTACTACCCTTGTGACCAAGG
CTGGAGAGGTGATCAATCCGCTGGCTTTGCCTATCACCGGAATCTTGATT
ACGGGATCAGTGGCGTCCACGTATGGTGCAGAGTACCAGTCATGGGTTGC
ACCATTGCTGGAGTTTATTACTACTGTATATGAACAGTATCCTCATGTGC
GGATCTTTGGAAGTTGTTTTGGCCACCAGGCGCTTGCAGACGCCTTGCTT
GCTGGATCTGCTTCGGCCAATGAGGTCAAGGTGGGATGTTGTCCCTATGG
GAAAGAGGCAGGCCTGGCGCAAGTCGAACTCACAGAGGGATTTGTGGATG
CCTTTCCCTGCTTGAGAGGAAAACGCACGTTGAGGCTGCAGATGATTCAT
GGGGATTGGGTGACGGTTGAGTCGTCACCTGAGAAAGCGCTTCCCTCGCC
TTGGATGAACATCGGGGGGACAAAGCCTTGTCCTATTCAGGGCTTGTATT
GCCCTGGGCGTGTTCTGTCCTATCAAGGGCACTTTGAATTCGACTCGTTT
GTCAACAGAGAGACGTGTGTTGACTTTGGCGGGAGGCTGGGTTGGCCGAA
AGAGCTTATCGAGCAGTATGTGACGGCAATTGGTGATGTGGACGGGAATG
GGGATGACTCCAAGCTAGCCGCAGAGGTGCTGGTGAGATTCTTTGCGGGA
GAAGATGATACGCAAAGCAAGGAAGGCATGGACAAGGCACGGGGTGAACA
GAGTGTGGGAGTAGGCAAACTAATTGGAAGTCTGGTGGAGCAGTTGATAG
GTGGGAACTGGTGGTCCAGCAAGGCATAA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_002474KJC3_002474Aspergillus niger KJC3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002474-T1.exon1KJC3_002474-T1.exon1Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002474-T1.cdsKJC3_002474-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002474-T1KJC3_002474-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR029062
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:2656700..2657728 +