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KJC3_002481-T3, KJC3_002481-T3 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_002481-T3
Unique NameKJC3_002481-T3
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:2675622..2677772-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_002481-T3 ID=KJC3_002481-T3|Name=KJC3_002481-T3|organism=Aspergillus niger KJC3|type=mRNA|length=2151bp|location=Sequence derived from alignment at ch2:2675622..2677772- (Aspergillus niger KJC3)
CAACCTCTCCACTGCTGCGATAGAATAGGAAGCCAGTAATGTTGGAAGCA
ACAAAGCCACGATGAGGTATTCTAGGCCCTATTTCTGGATACCCTCAACC
TTTCTTTTGTCCGCTAAAGACTAACAAAGAAAGTCTTGCAACTGAGTTTG
ATAAAGCACAGATCCTCCTCGAAGCCGATGAGTTTGTGACCAGGTACAAT
CTGCACGATTCCCGAGACTTGATTAGAAAGGGCGCTCTATTATCCTACGA
TCCTCATGATTACGCTCGCGTTGATGGACTGAGCGAAGACGAGATCACCG
CATTGCAAAATGGCAACGTGGACCGCCCGTCAAGACTCTGGTTGTTTTGC
GTTCTGGCAGGTCTTCTGTAGTCAGTCATCTTACTGGCACGGCCATCGAG
TGATTTTTTTATAATTCAGCTAACCTGCTAGTGTTCTGCTGGGCATCTCA
CTTCCCCCAGATGATTTCTCTATATTCTGGGGAGCTTCCTCCGGTCATTT
TCGCATGTAAGGCAACTTCATCCCACTTACCTAACATCGCTAAGATCTCC
TTGACAGGGTCCTATCAGTTGCAATTCCACTGCTAGAACACCCGCTTGTT
GGACTTTTAAGTAACTGCATTGGTCGACGTCAAGCGCTTTGTACCGCATC
AATTCTCGCCATACTGAGAGCATGTCTTGCTATACTCCTGAAACGTTTCC
AATATTGGCTGCTACCAGGGTTTGCAGCACTCTTTGTCGACCGTTTACTC
GCCGGAGTGGCATTAGCGACACTATCGTTCAACATGCCTCTACATCTCGC
CGAATCTGTCCCGGCTCCAGTCCGGGGCCGTGCGATGGTATTTTGGCCTC
TGTATGTCTCCAGTTTCAAGTCAAATCGGCGCCCATTAACATCATCACCT
TCAAACAGGGTATTAGGCGCCTTTGAATTTCCTTTGAGATCCCTTTTATT
GTGGGCATCTATCCCACTCTATCAATATGTGACCCGGGTCCATATCTCAA
TTATACCTGTCGCAGCATCATTGATCTTGTCATTGCGGTATATGACTTTA
GAGTCACCATACCAGCTTGTCGCACGAGGCCACATAGCATCTGCCCTTCA
GACACTGTACAAGTCTCGTCTATCGAAAATTGTTGCCGCTCGTGACCTCT
ATCGAATTTACGCCACCAGCTCTTTTGAGTCATCTCTAGCAAGCCAATCC
GCCAGACGAGCCACCACCTACTCAATCACATTTATGCTCACCAGGGCCCT
GATAATCTCCCCTGAGCTGCTGACAGAACATCTTTTAAACAGACCCGAGA
CTGATATTTCTCGACTCACGTTGATGATTTCCTCCAAAGGCTTTGGTCTC
GGTGCAATTGCTATTATCTGGTACTGGACTGACTGTGACCGATTGGGAGA
ACGCCGTTTCATGTTGCTCCGGGTATTGATCATGCAATTGCTGTATCTAA
TACTACCACTGGATCCATACGTTTATGACTCACTCGTATATTTTTGCATT
CAAATCGCGCTGTCCGTCGGTCTTTCCGTCGTGACCATGGTGTACGCTGT
CGAGGTCTTTCCTTACAGTTGTCGGGGTATGGATTCCAGTTCAAATGCTG
CAGTCGTTGAAAGATTGCTTCAGGCAATAAAGCAATACGCATGACTAACA
GGCACTATCTCCTACAGACCAAGGATACGCGATCACGGTATCAGTCTACA
ATATCGTGCGCGTTGTAATGCAAATCATAGGCTCGCAGCCTTCTTACCCA
TCTCGCTACCCAGATGGTGACCCGAGACATTTGGACTGTTTTATTGCGTT
ATACCGAGCAATACAAAAATACACCATTCCGATTGTTTCTGTGTTGACAT
GGGTTTTTATGCGGGAGACTGCAAAGATCCCACTCGAGGATATGGAGAAA
CTATTCGAGGCACGAAACCGGGATATTCTATTGTATCAGGTGAAGATTGT
CTGGCCATATTTGTTCAAAAAGTATATTTTTTGGCAAAATGTGGTTCTTG
AGCCGTTCGATGAGTCAAGGTATGGTACCAGTGCTATTGCTTTGGTGTAA
TGAAGGGTGCATATGTACGAGTATCTTGAACAGTCATGGCATATGGGGAG
TCGTGGGTAAAGGGGGTCTATATGCTCATTATTTTCCTAATACATAGAAA
G
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Coding sequence (CDS) from alignment at ch2:2675622..2677772-

>KJC3_002481-T3 ID=KJC3_002481-T3|Name=KJC3_002481-T3|organism=Aspergillus niger KJC3|type=CDS|length=4728bp|location=Sequence derived from alignment at ch2:2675622..2677772- (Aspergillus niger KJC3)
GGTATTAGGCGCCTTTGAATTTCCTTTGAGATCCCTTTTATTGTGGGCAT
CTATCCCACTCTATCAATATGTGACCCGGGTCCATATCTCAATTATACCT
GTCGCAGCATCATTGATCTTGTCATTGCGGTATATGACTTTAGAGTCACC
ATACCAGCTTGTCGCACGAGGCCACATAGCATCTGCCCTTCAGACACTGT
ACAAGTCTCGTCTATCGAAAATTGTTGCCGCTCGTGACCTCTATCGAATT
TACGCCACCAGCTCTTTTGAGTCATCTCTAGCAAGCCAATCCGCCAGACG
AGCCACCACCTACTCAATCACATTTATGCTCACCAGGGCCCTGATAATCT
CCCCTGAGCTGCTGACAGAACATCTTTTAAACAGACCCGAGACTGATATT
TCTCGACTCACGTTGATGATTTCCTCCAAAGGCTTTGGTCTCGGTGCAAT
TGCTATTATCTGGTACTGGACTGACTGTGACCGATTGGGAGAACGCCGTT
TCATGTTGCTCCGGGTATTGATCATGCAATTGCTGTATCTAATACTACCA
CTGGATCCATACGTTTATGACTCACTCGTATATTTTTGCATTCAAATCGC
GCTGTCCGTCGGTCTTTCCGTCGTGACCATGGTGTACGCTGTCGAGGTCT
TTCCTTACAGTTGTCGGGGTATGGATTCCAGTTCAAATGCTGCAGTCGTT
GAAAGATTGCTTCAGGCAATAAAGCAATACGCATGAGGTCCTATCAGTTG
CAATTCCACTGCTAGAACACCCGCTTGTTGGACTTTTAAGTAACTGCATT
GGTCGACGTCAAGCGCTTTGTACCGCATCAATTCTCGCCATACTGAGAGC
ATGTCTTGCTATACTCCTGAAACGTTTCCAATATTGGCTGCTACCAGGGT
TTGCAGCACTCTTTGTCGACCGTTTACTCGCCGGAGTGGCATTAGCGACA
CTATCGTTCAACATGCCTCTACATCTCGCCGAATCTGTCCCGGCTCCAGT
CCGGGGCCGTGCGATGGTATTTTGGCCTCTTGTTCTGCTGGGCATCTCAC
TTCCCCCAGATGATTTCTCTATATTCTGGGGAGCTTCCTCCGGTCATTTT
CGCATATGGCAACGTGGACCGCCCGTCAAGACTCTGGTTGTTTTGCGTTC
TGGCAGGTCTTCTGTAGTCAGTCATCTTACTGGGTATTAGGCGCCTTTGA
ATTTCCTTTGAGATCCCTTTTATTGTGGGCATCTATCCCACTCTATCAAT
ATGTGACCCGGGTCCATATCTCAATTATACCTGTCGCAGCATCATTGATC
TTGTCATTGCGGTATATGACTTTAGAGTCACCATACCAGCTTGTCGCACG
AGGCCACATAGCATCTGCCCTTCAGACACTGTACAAGTCTCGTCTATCGA
AAATTGTTGCCGCTCGTGACCTCTATCGAATTTACGCCACCAGCTCTTTT
GAGTCATCTCTAGCAAGCCAATCCGCCAGACGAGCCACCACCTACTCAAT
CACATTTATGCTCACCAGGGCCCTGATAATCTCCCCTGAGCTGCTGACAG
AACATCTTTTAAACAGACCCGAGACTGATATTTCTCGACTCACGTTGATG
ATTTCCTCCAAAGGCTTTGGTCTCGGTGCAATTGCTATTATCTGGTACTG
GACTGACTGTGACCGATTGGGAGAACGCCGTTTCATGTTGCTCCGGGTAT
TGATCATGCAATTGCTGTATCTAATACTACCACTGGATCCATACGTTTAT
GACTCACTCGTATATTTTTGCATTCAAATCGCGCTGTCCGTCGGTCTTTC
CGTCGTGACCATGGTGTACGCTGTCGAGGTCTTTCCTTACAGTTGTCGGG
GTATGGATTCCAGTTCAAATGCTGCAGTCGTTGAAAGATTGCTTCAGGCA
ATAAAGCAATACGCATGAGGTCCTATCAGTTGCAATTCCACTGCTAGAAC
ACCCGCTTGTTGGACTTTTAAGTAACTGCATTGGTCGACGTCAAGCGCTT
TGTACCGCATCAATTCTCGCCATACTGAGAGCATGTCTTGCTATACTCCT
GAAACGTTTCCAATATTGGCTGCTACCAGGGTTTGCAGCACTCTTTGTCG
ACCGTTTACTCGCCGGAGTGGCATTAGCGACACTATCGTTCAACATGCCT
CTACATCTCGCCGAATCTGTCCCGGCTCCAGTCCGGGGCCGTGCGATGGT
ATTTTGGCCTCTTGTTCTGCTGGGCATCTCACTTCCCCCAGATGATTTCT
CTATATTCTGGGGAGCTTCCTCCGGTCATTTTCGCATATGGCAACGTGGA
CCGCCCGTCAAGACTCTGGTTGTTTTGCGTTCTGGCAGGTCTTCTGTAGT
CAGTCATCTTACTGGGTATTAGGCGCCTTTGAATTTCCTTTGAGATCCCT
TTTATTGTGGGCATCTATCCCACTCTATCAATATGTGACCCGGGTCCATA
TCTCAATTATACCTGTCGCAGCATCATTGATCTTGTCATTGCGGTATATG
ACTTTAGAGTCACCATACCAGCTTGTCGCACGAGGCCACATAGCATCTGC
CCTTCAGACACTGTACAAGTCTCGTCTATCGAAAATTGTTGCCGCTCGTG
ACCTCTATCGAATTTACGCCACCAGCTCTTTTGAGTCATCTCTAGCAAGC
CAATCCGCCAGACGAGCCACCACCTACTCAATCACATTTATGCTCACCAG
GGCCCTGATAATCTCCCCTGAGCTGCTGACAGAACATCTTTTAAACAGAC
CCGAGACTGATATTTCTCGACTCACGTTGATGATTTCCTCCAAAGGCTTT
GGTCTCGGTGCAATTGCTATTATCTGGTACTGGACTGACTGTGACCGATT
GGGAGAACGCCGTTTCATGTTGCTCCGGGTATTGATCATGCAATTGCTGT
ATCTAATACTACCACTGGATCCATACGTTTATGACTCACTCGTATATTTT
TGCATTCAAATCGCGCTGTCCGTCGGTCTTTCCGTCGTGACCATGGTGTA
CGCTGTCGAGGTCTTTCCTTACAGTTGTCGGGGTATGGATTCCAGTTCAA
ATGCTGCAGTCGTTGAAAGATTGCTTCAGGCAATAAAGCAATACGCATGA
GGTCCTATCAGTTGCAATTCCACTGCTAGAACACCCGCTTGTTGGACTTT
TAAGTAACTGCATTGGTCGACGTCAAGCGCTTTGTACCGCATCAATTCTC
GCCATACTGAGAGCATGTCTTGCTATACTCCTGAAACGTTTCCAATATTG
GCTGCTACCAGGGTTTGCAGCACTCTTTGTCGACCGTTTACTCGCCGGAG
TGGCATTAGCGACACTATCGTTCAACATGCCTCTACATCTCGCCGAATCT
GTCCCGGCTCCAGTCCGGGGCCGTGCGATGGTATTTTGGCCTCTTGTTCT
GCTGGGCATCTCACTTCCCCCAGATGATTTCTCTATATTCTGGGGAGCTT
CCTCCGGTCATTTTCGCATATGGCAACGTGGACCGCCCGTCAAGACTCTG
GTTGTTTTGCGTTCTGGCAGGTCTTCTGTAGTCAGTCATCTTACTGGGTA
TTAGGCGCCTTTGAATTTCCTTTGAGATCCCTTTTATTGTGGGCATCTAT
CCCACTCTATCAATATGTGACCCGGGTCCATATCTCAATTATACCTGTCG
CAGCATCATTGATCTTGTCATTGCGGTATATGACTTTAGAGTCACCATAC
CAGCTTGTCGCACGAGGCCACATAGCATCTGCCCTTCAGACACTGTACAA
GTCTCGTCTATCGAAAATTGTTGCCGCTCGTGACCTCTATCGAATTTACG
CCACCAGCTCTTTTGAGTCATCTCTAGCAAGCCAATCCGCCAGACGAGCC
ACCACCTACTCAATCACATTTATGCTCACCAGGGCCCTGATAATCTCCCC
TGAGCTGCTGACAGAACATCTTTTAAACAGACCCGAGACTGATATTTCTC
GACTCACGTTGATGATTTCCTCCAAAGGCTTTGGTCTCGGTGCAATTGCT
ATTATCTGGTACTGGACTGACTGTGACCGATTGGGAGAACGCCGTTTCAT
GTTGCTCCGGGTATTGATCATGCAATTGCTGTATCTAATACTACCACTGG
ATCCATACGTTTATGACTCACTCGTATATTTTTGCATTCAAATCGCGCTG
TCCGTCGGTCTTTCCGTCGTGACCATGGTGTACGCTGTCGAGGTCTTTCC
TTACAGTTGTCGGGGTATGGATTCCAGTTCAAATGCTGCAGTCGTTGAAA
GATTGCTTCAGGCAATAAAGCAATACGCATGAGGTCCTATCAGTTGCAAT
TCCACTGCTAGAACACCCGCTTGTTGGACTTTTAAGTAACTGCATTGGTC
GACGTCAAGCGCTTTGTACCGCATCAATTCTCGCCATACTGAGAGCATGT
CTTGCTATACTCCTGAAACGTTTCCAATATTGGCTGCTACCAGGGTTTGC
AGCACTCTTTGTCGACCGTTTACTCGCCGGAGTGGCATTAGCGACACTAT
CGTTCAACATGCCTCTACATCTCGCCGAATCTGTCCCGGCTCCAGTCCGG
GGCCGTGCGATGGTATTTTGGCCTCTTGTTCTGCTGGGCATCTCACTTCC
CCCAGATGATTTCTCTATATTCTGGGGAGCTTCCTCCGGTCATTTTCGCA
TATGGCAACGTGGACCGCCCGTCAAGACTCTGGTTGTTTTGCGTTCTGGC
AGGTCTTCTGTAGTCAGTCATCTTACTG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_002481KJC3_002481Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002481-T3KJC3_002481-T3-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002481-T3.cdsKJC3_002481-T3.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002481-T3.utr3p1KJC3_002481-T3.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002481-T3.exon4KJC3_002481-T3.exon4Aspergillus niger KJC3exon
KJC3_002481-T3.exon3KJC3_002481-T3.exon3Aspergillus niger KJC3exon
KJC3_002481-T3.exon2KJC3_002481-T3.exon2Aspergillus niger KJC3exon
KJC3_002481-T3.exon1KJC3_002481-T3.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002481-T3.utr5p1KJC3_002481-T3.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR036259
DBxrefInterPro:IPR005828
DBxrefPFAM:PF00083
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:2675622..2677772 -
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