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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:2720831..2724136+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_002493-T1 ID=KJC3_002493-T1|Name=KJC3_002493-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3306bp|location=Sequence derived from alignment at ch2:2720831..2724136+ (Aspergillus niger KJC3)
CCACGGACAAGTGACTCACCCAGCAGGCTTCCCCTCCAAGATGTCGCCTC
ATTGCTAACTGCCAGCCGCTACAATTTGCTTCCAAACTGCATGTTATCTC
TCTTGGTTCCTTCATTGAAGAATACATCATTCTCCAACGGCTTCATCCGC
GCCCTGCATCAATTCTTTGACAAAGCACTATTCAACACCAAAATGACTCT
AACAGGATCTACCAACTACACACGAGGAAGAGTACATATATTGAACGCAA
AACAGTTACGGGCACCCCGAATATACCGCGGGGTTTTAACGATAGCTCGC
TGTTAGATATCAGCCGCTCTTTGTTTATAACCCTACATCCCCCGGTCTCC
GATTGCCGTCGAGCTTGTATTTACCATCATGGCATCTGTGTTCACATACG
ATCCTGATCCTCCGCGGGTCTCATCTCCGTGGTCCACATCAGGGTCCTCA
ACCCCTCAAGTTGCAGCTACTGGCAACCGCACGGTGCCTCGAGCACGTTC
AAGTACGAACTTGGACCGCGCGGACCCTGATCTACTCTCTGATTATGGGA
TCACCAAATTGGACCCTGAACCCCAAGAGGGGCCCACAGAGTACAAACTC
CATTTGCTTCTACGCCCTCGCCGGCCCTATGTCTCCATGTCAACTAGCAA
CCTCGTGGGAGGCTCATATCACTCCCGAGCAAGCTTGTCAGCGGATAGCC
CCATGCCGTCGAGCTACGAGTCGAACCCGAGACCGCAGCAGACTCGCTCG
ACTGAAAGCCGCCAGCAAAGGCTGCAGCATCTCACCACGCAGCTCCTGTG
GCGCTTGCAGCAGTCGTCGCCCTTTCATTCGTCTACGACTGCAAATCTTG
TGCTGCCAGTACTTCCAGAAGCAACATCTCAGCTAGGAGCGGCACATAAA
CCTGCTCGCTTACTTCCTGGCCTAGAGGAGAGCCAAGGCGCTCTGTATGA
GGTTGGTGTTGCTGATGATGGGACGTTTGTTGGACTCACTCAAGATGAGC
TGGAGGAGAGCTTGTCTACTTTGCAGGTTATGGCAGCCAGCTTGGGCTGC
AAGGTTGATGTCCTTCGCAGAGTGAATGTTGGCAGTTGTGAATGGGCCGA
AGATCCATACTCCGAGAACATGGATACTGGCAAGGTCCATGCTGAATGCC
TTTGGGTTGCAGAAGCGTTAGTAAGCCCTGACTGGGACTTCTATCGCGTC
AAGTCTCCTGGTGAAGGCCAGACGCATGACAATTCATCTTCCGACAATGC
GAAGAGAGAAGACTCGCTAGGCAGCTCTTCCGGTACTGAGCAGATCCGTG
TCTCCATTGCCGGCCCTAGTGCAGCCGGCAAGTCTTCTCTATTGGGTACT
CTAACCTCGTCCGTACTCGATAATGGGAGGGGAACAAGCAGACTAGGTCT
GTTGAAACATCGACACGAAATATCGTCAGGAATCACCAGCTCCGTTGCTC
ATGAATTGATTGGATACGCTGCAGATGAATCTCAGGCACAAACTGCTGAA
GTGATCAACTATGCCTGTGGCAACATTGCAGCTTGGGATGATATTCACGC
CGCTTCGGAGGGTGGACGTCTAGCTTTTGTCTCCGATCTACCAGGCTCAG
TACGCTATCTGAAGTCCACGTTACGAGGAATGATCGGTTGGGCTCCTCAT
TATGTACTTTTGTGCATCCCGGCAACTTGCGACGACGAGGCTCCTGCGGA
GTCTGGCCAATCTGCTGAACAGCCTGCAGACATGACACTAGCACTGTCAC
ACCTGGAACTCTGTGCTAAGATGGAGATTCCCACTGTTGTTGTAATTACC
AAAATGGACGTGGCATCCCGCTCAGGCCTGCGGAATAATCTTGCTAAAGT
CCTATCGGCTCTCAAGTCATCTGGCAAGAAGCCAGCCATGATGTCCGTTC
CAACCGCCCAGACAGTGGACCTACAGCGTACAGGGTCGAAGGATGTAGAA
GAGGTGCGGAAGTTGATTTCCACTACAGAAAGCTGGGAATCGACCGTGCC
AATCGTGCTTACAAGTGCGGTGGATGGCTCAGGCATAGGTAAACTTCATG
CGCTCCTCCGATACCTCCCCATTCCTGCGAGGCCGCCATCACGGGACGTC
TTGTTGCCCAAGACACTAGCTACTCACACTCACCCTGAAGATGTTTTTGA
TGTCGACGAAGTCTTCGCTATTCCTCCCTCCAAGGTATACTCAGTAGCTG
CGGAGCAAGAAAAGAAAGAAGCGCACGGCGTGGTTCTCTGTGGTCTGGTT
CGCTACGGATCTATTTCGGCAGGAGACGAGCTACTCGTCGGACCTCTTAT
GTCTAACACATCTGACCCGGGCAATTGCTTACAGAGGCAGAGGAGTCGAT
CGGGAAAACGGCCGGACAGCATTCAGCATTCTAGCACGAATCGGAGCAGA
CCCGCTTCTGGGGACTTCTCGACCTCGTTTATACATGGCTCTTTCCCTGG
GAAACCTTCTCTTCCAACCCAAGCATACTGGCAACGTGTCCGCGCAGTCA
GTGTACGGAATTTGCGACTCCCAATTCAAAAATTGACGCAAGACCAAGTC
GGGACGATCGGGATAGAGCCGATATCCTTGACTGCGAATGGGCAGATGCC
ACGACTGGGGAAGATACGGAAAGGCTCCATCCTGCTCAAATTGTCGGCGT
CGTCTGCGTCTATACCAAGGGCCCTTCTCTTTCACACTGGCTTCGTAGCA
AGCTTTCCGTCTAGCGAGTTCGCGTCTCCTCTATCCCCACCGGTACTGCT
GGGTGGTAATGCCACGGTCTATGTGACCAATGTTCGCACGACAGTGAAGT
TGTCATGCATGGCTCTTGCGGAAGATGAGGTTATCTCCAGACCACCGTCA
CCGACCGAACCGGAGTTCTTCAACTTCGATGGCGACACTTCAGGCTATGA
ACGGGGTCGCGAACCAGGGGTACAAGATATGGTACAGTCTTCTAGCAATC
CAGGACAAGGCGATATCAAAATTACATTCGAATTTGTATCGTCAGTTGAA
TGGATCGAAGTTGGATCGAGGGTTCTTCTGATGCCCGGAACATCGACAGC
CCTGGTGTCTGCGCAGGGGTCCAGCCAGACCTCGGGGCTCGAAGGCTTCC
TTGGTCGGGTCTGCGATGTTCTTTGTCTTGAAAATACTACTAGTATATGA
GCCTTTGTGGGGAGCTTGTTTTGTTCGCTTTATGTATGGATTATTGTCCA
GCAATTGTTATTAGCAGATATGTTGTTTTATAAGGCTTTATCTCTCCTCG
TAATTGATCCAATATATGGAGTAGTTGCGGTGAGCAAGCATCTTTAATTG
TGAGCG back to topCoding sequence (CDS) from alignment at ch2:2720831..2724136+ >KJC3_002493-T1 ID=KJC3_002493-T1|Name=KJC3_002493-T1|organism=Aspergillus niger KJC3|type=CDS|length=2772bp|location=Sequence derived from alignment at ch2:2720831..2724136+ (Aspergillus niger KJC3)
ATGGCATCTGTGTTCACATACGATCCTGATCCTCCGCGGGTCTCATCTCC
GTGGTCCACATCAGGGTCCTCAACCCCTCAAGTTGCAGCTACTGGCAACC
GCACGGTGCCTCGAGCACGTTCAAGTACGAACTTGGACCGCGCGGACCCT
GATCTACTCTCTGATTATGGGATCACCAAATTGGACCCTGAACCCCAAGA
GGGGCCCACAGAGTACAAACTCCATTTGCTTCTACGCCCTCGCCGGCCCT
ATGTCTCCATGTCAACTAGCAACCTCGTGGGAGGCTCATATCACTCCCGA
GCAAGCTTGTCAGCGGATAGCCCCATGCCGTCGAGCTACGAGTCGAACCC
GAGACCGCAGCAGACTCGCTCGACTGAAAGCCGCCAGCAAAGGCTGCAGC
ATCTCACCACGCAGCTCCTGTGGCGCTTGCAGCAGTCGTCGCCCTTTCAT
TCGTCTACGACTGCAAATCTTGTGCTGCCAGTACTTCCAGAAGCAACATC
TCAGCTAGGAGCGGCACATAAACCTGCTCGCTTACTTCCTGGCCTAGAGG
AGAGCCAAGGCGCTCTGTATGAGGTTGGTGTTGCTGATGATGGGACGTTT
GTTGGACTCACTCAAGATGAGCTGGAGGAGAGCTTGTCTACTTTGCAGGT
TATGGCAGCCAGCTTGGGCTGCAAGGTTGATGTCCTTCGCAGAGTGAATG
TTGGCAGTTGTGAATGGGCCGAAGATCCATACTCCGAGAACATGGATACT
GGCAAGGTCCATGCTGAATGCCTTTGGGTTGCAGAAGCGTTAGTAAGCCC
TGACTGGGACTTCTATCGCGTCAAGTCTCCTGGTGAAGGCCAGACGCATG
ACAATTCATCTTCCGACAATGCGAAGAGAGAAGACTCGCTAGGCAGCTCT
TCCGGTACTGAGCAGATCCGTGTCTCCATTGCCGGCCCTAGTGCAGCCGG
CAAGTCTTCTCTATTGGGTACTCTAACCTCGTCCGTACTCGATAATGGGA
GGGGAACAAGCAGACTAGGTCTGTTGAAACATCGACACGAAATATCGTCA
GGAATCACCAGCTCCGTTGCTCATGAATTGATTGGATACGCTGCAGATGA
ATCTCAGGCACAAACTGCTGAAGTGATCAACTATGCCTGTGGCAACATTG
CAGCTTGGGATGATATTCACGCCGCTTCGGAGGGTGGACGTCTAGCTTTT
GTCTCCGATCTACCAGGCTCAGTACGCTATCTGAAGTCCACGTTACGAGG
AATGATCGGTTGGGCTCCTCATTATGTACTTTTGTGCATCCCGGCAACTT
GCGACGACGAGGCTCCTGCGGAGTCTGGCCAATCTGCTGAACAGCCTGCA
GACATGACACTAGCACTGTCACACCTGGAACTCTGTGCTAAGATGGAGAT
TCCCACTGTTGTTGTAATTACCAAAATGGACGTGGCATCCCGCTCAGGCC
TGCGGAATAATCTTGCTAAAGTCCTATCGGCTCTCAAGTCATCTGGCAAG
AAGCCAGCCATGATGTCCGTTCCAACCGCCCAGACAGTGGACCTACAGCG
TACAGGGTCGAAGGATGTAGAAGAGGTGCGGAAGTTGATTTCCACTACAG
AAAGCTGGGAATCGACCGTGCCAATCGTGCTTACAAGTGCGGTGGATGGC
TCAGGCATAGGTAAACTTCATGCGCTCCTCCGATACCTCCCCATTCCTGC
GAGGCCGCCATCACGGGACGTCTTGTTGCCCAAGACACTAGCTACTCACA
CTCACCCTGAAGATGTTTTTGATGTCGACGAAGTCTTCGCTATTCCTCCC
TCCAAGGTATACTCAGTAGCTGCGGAGCAAGAAAAGAAAGAAGCGCACGG
CGTGGTTCTCTGTGGTCTGGTTCGCTACGGATCTATTTCGGCAGGAGACG
AGCTACTCGTCGGACCTCTTATGTCTAACACATCTGACCCGGGCAATTGC
TTACAGAGGCAGAGGAGTCGATCGGGAAAACGGCCGGACAGCATTCAGCA
TTCTAGCACGAATCGGAGCAGACCCGCTTCTGGGGACTTCTCGACCTCGT
TTATACATGGCTCTTTCCCTGGGAAACCTTCTCTTCCAACCCAAGCATAC
TGGCAACGTGTCCGCGCAGTCAGTGTACGGAATTTGCGACTCCCAATTCA
AAAATTGACGCAAGACCAAGTCGGGACGATCGGGATAGAGCCGATATCCT
TGACTGCGAATGGGCAGATGCCACGACTGGGGAAGATACGGAAAGGCTCC
ATCCTGCTCAAATTGTCGGCGTCGTCTGCGTCTATACCAAGGGCCCTTCT
CTTTCACACTGGCTTCGTAGCAAGCTTTCCGTCTAGCGAGTTCGCGTCTC
CTCTATCCCCACCGGTACTGCTGGGTGGTAATGCCACGGTCTATGTGACC
AATGTTCGCACGACAGTGAAGTTGTCATGCATGGCTCTTGCGGAAGATGA
GGTTATCTCCAGACCACCGTCACCGACCGAACCGGAGTTCTTCAACTTCG
ATGGCGACACTTCAGGCTATGAACGGGGTCGCGAACCAGGGGTACAAGAT
ATGGTACAGTCTTCTAGCAATCCAGGACAAGGCGATATCAAAATTACATT
CGAATTTGTATCGTCAGTTGAATGGATCGAAGTTGGATCGAGGGTTCTTC
TGATGCCCGGAACATCGACAGCCCTGGTGTCTGCGCAGGGGTCCAGCCAG
ACCTCGGGGCTCGAAGGCTTCCTTGGTCGGGTCTGCGATGTTCTTTGTCT
TGAAAATACTACTAGTATATGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003924 | GTPase activity |
| GO:0005525 | GTP binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002493-T1.utr5p1 | KJC3_002493-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002493-T1.utr3p1 | KJC3_002493-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR027417 |
| DBxref | InterPro:IPR000795 |
| DBxref | PFAM:PF00009 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:2720831..2724136 + |
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