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KJC3_002539-T2, KJC3_002539-T2 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_002539-T2
Unique NameKJC3_002539-T2
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:2855197..2857858+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_002539-T2 ID=KJC3_002539-T2|Name=KJC3_002539-T2|organism=Aspergillus niger KJC3|type=mRNA|length=2662bp|location=Sequence derived from alignment at ch2:2855197..2857858+ (Aspergillus niger KJC3)
GCCTAGGGTTGCATAGCACATGGTCTCGATCTGTAGGCTTATCGACCATG
GCAGTGTGGGATGAATCCAATTTTGCCTATACAAGTCCAGGTAATCTAGT
ATATCAAAACCAAGAGGATAACACCTCCACCACACTGAGAAATTCCTGAT
CATCCGGGTAAGAAGTATCTAGACATGTAGTGGTTGACTGTTTGCTGCTT
TCTTCCCGAGGCCCCCCTGACCCACTTCACTGCGATAGAAGCACGCGCGA
CTAAAGGCTGGGCCGAAGTGGACCAGAAACCTTAACGGAGATATGCTGTT
TCGATGGGCACTGTTCGCATGGAGGGAGAAAAAGCCAGGGCGCTTCCATG
CTGCTCTGGCTTGAAATCCAACATGAAATCCAACGGTATCCCGGTTATCA
AATCTGAATACCCAGGGGATCATTAAAACTTCGGACTTGGCCGAATTCCC
TCCGCAATTGTCGTCCACCACCGCGACTCACGGGAAAAGGTTTTCAAGTG
TTATCTGACCATGTCTCGCCCGGTTGGCACTAAAAAGACACGGACTGGGG
CAATCTGTGATAAGAAAACCCTGTTCCACAAATAACAGGCCGACCTTCTG
TGAGGGCCAGAGATAAAAACGACCAATCTGGCACGACTAGCGAGGCCTGC
GATTCCCCATTCGTCGCCGACTTCAAGCGCGATGGCAATTTTCGCCTACA
AATATATGCAGCCTTCAACGCCGGTTTTCTGGGGAAGCAGTTGAGCAGAA
GAGGTGTCTCGTGAGCCTTTTTTTCTCTCCTCCTCCTCCCTTGCTCTCCT
GCCGCTTCTTTCTCCCTCCCCGCAATTTCCCCCCCCTCTCTCCCTTGCCC
CTCCTCTTCAGGATGGATTTCAAAACCCTTGAGGATGGCAACCCCATCGA
ACCGAAGCAGGCCACCGCTTCGGTGGAGGAACACGCCCTGGTTAAACCTA
GCGGTTTCTTCGCCCGCATCCGCTACTATGAAGAGCTGTTGGATCGGAAA
ATGGGCGTTGAGTCCCACAGTCTCGATCGAGTCCTGCCCGAAGAGCGCAA
ACCGCCTAACACCTTGGCCATGGCCTTCATCTGGGCATCGGCCACCATGA
ACCTCAGTTGTTTCAGTACGGGCTTTATGGGGAAGGAGTTTGGCTTGACC
CTAGGGCAGACGATCGCCATTATGATTTGCGCGACGTTTCTGGGCGCTGC
TCTCACGGTTCGCATACCACTTTCTCTACCTATCTTTCGCTGCGACGCAA
TGCGGCGCACTCATCTTATGGTCTGTCTAAAGGCTTACATGTCGGTTCAC
TAGGGTTGGTGTGCCACGATGGGCCCTGGCACTGGCCTTCGTCAAGTCGC
CATCTCTAGATACTCCTTTGGCTTCTACCCCTCCTCCATCATCGCGGCGC
TGAATGTCGTCGAACAGCTGGGCTGGGCCTCTGTCAGCTGTATTACTGGT
GGTCAAGCTCTTCGTGCCGTTTCGGACAATCACATTTCCATGGTCGTGGG
AGTCGTCATTGTTGCATGCGTTAGTCTGTGTTTCAGCTTCTTCGGTCTTA
GGGCTGTTATGACCATTGAGCAATACATTTGGATGGTTTCCTTTGTCGTC
TTCATCATCGTCTACGGTGAATCGGCCCACCACGCCAGCCTGTCAGATCC
CGGTACCGTGTCCGGGCTGACCAAGTCCGGAAATGTTCTGAGCCTGATCA
GCGTTATCTATGGCTCGAGTGCATCGTGGTGCTCGATCGTGTCTGACTTT
TATGTACACTACCCGGTCAACACCTCGAAGGTCAAGGTCTTCATCTACAC
CACCCTGGGTATTTCACTCCCGACTTGTATCGGAATGTTGCTCGGTGCGT
GTATCGCATCTGCCCTGGACGGAAACCCAGAATGGGCTGCTGCCTATGAC
CAAGGAACTGGAGAGATCTTGCAGACCATCATCTATCCCCGCAAATTTGC
TAAGTTCCTCTTGGTCTTGCTGGTGCTGTGTGGCAGTAAGTATACCCACT
TACCTCACGTCATAACCGCTACTAACACTACAATATAGTCGGTATGAACT
GCATTGCCATTTATGCTGGATCCCTTTCGGCACAATTATTCGCCAAACCC
TTCCAGAAGATCCCCCGAATTATTTGGACACTACTCGTGTTCGCCTGCAT
TCTTGTCATTGGTATCGCAGGCCGGGACCACCTGCTGACTGTCCTGGATA
ATTTCCTCTCCCTCTTGGGTTACTGGAACACCTCCTTTTTCGTCATTTTG
TTCTGCGAACACTACTTCTTCCGCAACGGCAACCTGGCCAACTACGACCT
CGACGCCTGGAACACGCCGTCGAAACTGCCCGTCGGCTACGCCGGTCTCA
CGGCGTTCCTATGCGGTGCGGCCGGCTGGATTGTCGGCATGGACGAAACG
TATTATGTTGGAGCGCTGGCGCGCAAGATTGGCACCGATGGAGGAGACAT
TGCCAATGAGCTGGCGTTTGTTTTTACTAGCTTATCGTATATTCCCTTGC
GGAAGCTGGAGTTGAAGTACGTTGGACGGTAGATGAGCAACACATGTACA
CTATGATCATATTATCATGACGATGAACGGCAGGCCACGATATATATATT
GATGGTTAATGATAATGCAACTCCTATGATCTCTGCTATAATCATACCAC
CAGAACAATAGC
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Coding sequence (CDS) from alignment at ch2:2855197..2857858+

>KJC3_002539-T2 ID=KJC3_002539-T2|Name=KJC3_002539-T2|organism=Aspergillus niger KJC3|type=CDS|length=2322bp|location=Sequence derived from alignment at ch2:2855197..2857858+ (Aspergillus niger KJC3)
ATGGGCCCTGGCACTGGCCTTCGTCAAGTCGCCATCTCTAGATACTCCTT
TGGCTTCTACCCCTCCTCCATCATCGCGGCGCTGAATGTCGTCGAACAGC
TGGGCTGGGCCTCTGTCAGCTGTATTACTGGTGGTCAAGCTCTTCGTGCC
GTTTCGGACAATCACATTTCCATGGTCGTGGGAGTCGTCATTGTTGCATG
CGTTAGTCTGTGTTTCAGCTTCTTCGGTCTTAGGGCTGTTATGACCATTG
AGCAATACATTTGGATGGTTTCCTTTGTCGTCTTCATCATCGTCTACGGT
GAATCGGCCCACCACGCCAGCCTGTCAGATCCCGGTACCGTGTCCGGGCT
GACCAAGTCCGGAAATGTTCTGAGCCTGATCAGCGTTATCTATGGCTCGA
GTGCATCGTGGTGCTCGATCGTGTCTGACTTTTATGTACACTACCCGGTC
AACACCTCGAAGGTCAAGGTCTTCATCTACACCACCCTGGGTATTTCACT
CCCGACTTGTATCGGAATGTTGCTCGGTGCGTGTATCGCATCTGCCCTGG
ACGGAAACCCAGAATGGGCTGCTGCCTATGACCAAGGAACTGGAGAGATC
TTGCAGACCATCATCTATCCCCGCAAATTTGCTAAGTTCCTCTTGGTCTT
GCTGGTGCTGTGTGGCATCGGTATGAACTGCATTGCCATTTATGCTGGAT
CCCTTTCGGCACAATTATTCGCCAAACCCTTCCAGAAGATCCCCCGAATT
ATTTGGACACTACTCGTGTTCGCCTGCATTCTTGTCATTGGTATCGCAGG
CCGGGACCACCTGCTGACTGTCCTGGATAATTTCCTCTCCCTCTTGGGTT
ACTGGAACACCTCCTTTTTCGTCATTTTGTTCTGCGAACACTACTTCTTC
CGCAACGGCAACCTGGCCAACTACGACCTCGACGCCTGGAACACGCCGTC
GAAACTGCCCGTCGGCTACGCCGGTCTCACGGCGTTCCTATGCGGTGCGG
CCGGCTGGATTGTCGGCATGGACGAAACGTATTATGTTGGAGCGCTGGCG
CGCAAGATTGGCACCGATGGAGGAGACATTGCCAATGAGCTGGCGTTTGT
TTTTACTAGCTTATCGTATATTCCCTTGCGGAAGCTGGAGTTGAAGTACG
TTGGACGGTAGATGGGCCCTGGCACTGGCCTTCGTCAAGTCGCCATCTCT
AGATACTCCTTTGGCTTCTACCCCTCCTCCATCATCGCGGCGCTGAATGT
CGTCGAACAGCTGGGCTGGGCCTCTGTCAGCTGTATTACTGGTGGTCAAG
CTCTTCGTGCCGTTTCGGACAATCACATTTCCATGGTCGTGGGAGTCGTC
ATTGTTGCATGCGTTAGTCTGTGTTTCAGCTTCTTCGGTCTTAGGGCTGT
TATGACCATTGAGCAATACATTTGGATGGTTTCCTTTGTCGTCTTCATCA
TCGTCTACGGTGAATCGGCCCACCACGCCAGCCTGTCAGATCCCGGTACC
GTGTCCGGGCTGACCAAGTCCGGAAATGTTCTGAGCCTGATCAGCGTTAT
CTATGGCTCGAGTGCATCGTGGTGCTCGATCGTGTCTGACTTTTATGTAC
ACTACCCGGTCAACACCTCGAAGGTCAAGGTCTTCATCTACACCACCCTG
GGTATTTCACTCCCGACTTGTATCGGAATGTTGCTCGGTGCGTGTATCGC
ATCTGCCCTGGACGGAAACCCAGAATGGGCTGCTGCCTATGACCAAGGAA
CTGGAGAGATCTTGCAGACCATCATCTATCCCCGCAAATTTGCTAAGTTC
CTCTTGGTCTTGCTGGTGCTGTGTGGCATCGGTATGAACTGCATTGCCAT
TTATGCTGGATCCCTTTCGGCACAATTATTCGCCAAACCCTTCCAGAAGA
TCCCCCGAATTATTTGGACACTACTCGTGTTCGCCTGCATTCTTGTCATT
GGTATCGCAGGCCGGGACCACCTGCTGACTGTCCTGGATAATTTCCTCTC
CCTCTTGGGTTACTGGAACACCTCCTTTTTCGTCATTTTGTTCTGCGAAC
ACTACTTCTTCCGCAACGGCAACCTGGCCAACTACGACCTCGACGCCTGG
AACACGCCGTCGAAACTGCCCGTCGGCTACGCCGGTCTCACGGCGTTCCT
ATGCGGTGCGGCCGGCTGGATTGTCGGCATGGACGAAACGTATTATGTTG
GAGCGCTGGCGCGCAAGATTGGCACCGATGGAGGAGACATTGCCAATGAG
CTGGCGTTTGTTTTTACTAGCTTATCGTATATTCCCTTGCGGAAGCTGGA
GTTGAAGTACGTTGGACGGTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_002539KJC3_002539Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002539-T2.utr5p1KJC3_002539-T2.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002539-T2.exon1KJC3_002539-T2.exon1Aspergillus niger KJC3exon
KJC3_002539-T2.exon2KJC3_002539-T2.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002539-T2.cdsKJC3_002539-T2.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002539-T2.utr3p1KJC3_002539-T2.utr3p1Aspergillus niger KJC3three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002539-T2KJC3_002539-T2-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
NoteantiSMASH:Cluster_2.12
DBxrefInterPro:IPR001248
DBxrefInterPro:IPR038271
DBxrefPFAM:PF02133
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:2855197..2857858 +
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