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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:2918428..2920276- Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_002559-T1 ID=KJC3_002559-T1|Name=KJC3_002559-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1849bp|location=Sequence derived from alignment at ch2:2918428..2920276- (Aspergillus niger KJC3)
TCATTATTGATTACAGAGCAGAACTCGCACTATCTTTACAAGCATCAAGT
CAAACCAACCTCATGATGTTCTTAGTCCCCGACTCCGTGATCCCACGCCC
TGCCACAGACGACTACTACAACCTTGGCACATACAGTCGACCCATCAGCA
CTACAAGCCAAGATGCGCAGATCTGGTTTGACCGCGGCCTCATTTGGTGC
TACGCCTTCAATCACGCTGAAGGCTATCGATGCTTTGAACAGGCAATAGC
CCACGACCGCAACCTCGCCATCGCCTACTGGGGCCTAGCTTACGCGATGG
GACCGAACTATAACAAAGCCTGGCGTCTGTTTGATCCAGTGGACCTCAAG
CATAGCATGAAGCTATGCCATGAGACTGCACAGAAAGCTTTAGAGCTCTG
TCAGTTAGCGTCCGTTACGCCCGTCGAGCGCGCACTTATAGAAGCTATGC
AAACTCGCTTCCCCGTTGACCATCCTGCCGAAGACTACGACCAGATCAAC
CACGCCTATGATGCAGCAATGAAGAAGGTCTATGACCAGTTCCCCACTGA
TCTAGACGTCATGGCCCTTTACGTAGACGCAAAGATGCATACAGCCCAGC
GCAAGATGTTTCACATCAAGACTGGTCTCCCCATCGAGACGTCTCCCGTT
TACGACGTGCAGAAGCTTTTCAAAGATGGCTTGGCCCTTCCTGGCGCAGA
TACACATCCGGGTCTGCTTCATTTCTGTATTCATTTCTGGGAAATGTCCG
CCACTCCGGCTGTTGCGCTTCCTCCAGCAGACGCTCTGCGCCATCTTGTC
CCTGACGCTGGGCACCTGCATCACATGCCTACTCATCTTGATGTTCTGGT
TGGCGATTACCGTCGCTCGGTCGACTCAAATACTGCCGCAGTTCAAGCAG
ACGAGAAGTTTCTCGCGCGTGAAGGTGCGAAGAACATGTATAGTTTCTAC
CGTCTTCACAACTACCACTCGCTCGTCTACGCGGCAATGCTCTCCGGTCA
ATCCAAAATCGCTCTAAGAGCTGTAGACCAGATGGAAGCATCGATCACAG
ACGATGTGCTTCGGGTAGACTCCCCTCCGCTAGCAGACTGGCTTGAGTTC
TTCAAGTCAGTACGCGTTCATGTCTACGTCCGCTTCGGTCTCTGGGAAGA
GCTCAAGGAACTCCCGATCCCTGAAGATCAGGACCTCTACTGCGTCACCA
CAGCCATGACACACTACGGCAAAGCGGTCGCGTTCGCAGCTACGAACAAC
GTTCCGGAAGCACTGAAGGAACGCACTCTCTACCAAGAGGCCGCTAAACG
CGTTCCTCCCAGCCGGAAAGACTACCCGAACCTGATCATTGATATTCTAA
AGGTTGCAACCGCTATGCTAGACGGCGAGATCGAGTACCGTCGAGGGAAC
TTTACGCAGGCGTTTGAGAGTCTGCGGGAAGCGATTCGTCATGACGATGC
GCTGATGTATACCGAACCTTGGGGGTGGATGTTGCCTACGCGACATGCAT
ATGCAGCCTTGTCGCTGGAGCAGGGCCATGTGGAGGAAGCTGCGAGAGCG
TATGCGGAGGATTTAGGTCTTGATGCAGAAATTACTCGAGCGCATCAGCA
TCCGAATAATGTGTGGGCGCTGCATGGGTATCATGAGTGTCTGATGAGAT
TGGGACGCAGAGCAGAGGCACTTATCATTAAACAGCAGCTGGATGTTGCT
TTGAGTGTGGCTGATGTGGATATTAAGTCTTCGTGCTTTTGTCGGCTGGG
TGTGCAGGGATCGCAGTGTTGTTCGTGAGTTTGTTCGGGTGTATATAGAA
GAGTCTTATAGAGAAGGTCCTCGTGCAAATTGATTGACTATTAAGGATG back to topCoding sequence (CDS) from alignment at ch2:2918428..2920276- >KJC3_002559-T1 ID=KJC3_002559-T1|Name=KJC3_002559-T1|organism=Aspergillus niger KJC3|type=CDS|length=1716bp|location=Sequence derived from alignment at ch2:2918428..2920276- (Aspergillus niger KJC3)
ATGATGTTCTTAGTCCCCGACTCCGTGATCCCACGCCCTGCCACAGACGA
CTACTACAACCTTGGCACATACAGTCGACCCATCAGCACTACAAGCCAAG
ATGCGCAGATCTGGTTTGACCGCGGCCTCATTTGGTGCTACGCCTTCAAT
CACGCTGAAGGCTATCGATGCTTTGAACAGGCAATAGCCCACGACCGCAA
CCTCGCCATCGCCTACTGGGGCCTAGCTTACGCGATGGGACCGAACTATA
ACAAAGCCTGGCGTCTGTTTGATCCAGTGGACCTCAAGCATAGCATGAAG
CTATGCCATGAGACTGCACAGAAAGCTTTAGAGCTCTGTCAGTTAGCGTC
CGTTACGCCCGTCGAGCGCGCACTTATAGAAGCTATGCAAACTCGCTTCC
CCGTTGACCATCCTGCCGAAGACTACGACCAGATCAACCACGCCTATGAT
GCAGCAATGAAGAAGGTCTATGACCAGTTCCCCACTGATCTAGACGTCAT
GGCCCTTTACGTAGACGCAAAGATGCATACAGCCCAGCGCAAGATGTTTC
ACATCAAGACTGGTCTCCCCATCGAGACGTCTCCCGTTTACGACGTGCAG
AAGCTTTTCAAAGATGGCTTGGCCCTTCCTGGCGCAGATACACATCCGGG
TCTGCTTCATTTCTGTATTCATTTCTGGGAAATGTCCGCCACTCCGGCTG
TTGCGCTTCCTCCAGCAGACGCTCTGCGCCATCTTGTCCCTGACGCTGGG
CACCTGCATCACATGCCTACTCATCTTGATGTTCTGGTTGGCGATTACCG
TCGCTCGGTCGACTCAAATACTGCCGCAGTTCAAGCAGACGAGAAGTTTC
TCGCGCGTGAAGGTGCGAAGAACATGTATAGTTTCTACCGTCTTCACAAC
TACCACTCGCTCGTCTACGCGGCAATGCTCTCCGGTCAATCCAAAATCGC
TCTAAGAGCTGTAGACCAGATGGAAGCATCGATCACAGACGATGTGCTTC
GGGTAGACTCCCCTCCGCTAGCAGACTGGCTTGAGTTCTTCAAGTCAGTA
CGCGTTCATGTCTACGTCCGCTTCGGTCTCTGGGAAGAGCTCAAGGAACT
CCCGATCCCTGAAGATCAGGACCTCTACTGCGTCACCACAGCCATGACAC
ACTACGGCAAAGCGGTCGCGTTCGCAGCTACGAACAACGTTCCGGAAGCA
CTGAAGGAACGCACTCTCTACCAAGAGGCCGCTAAACGCGTTCCTCCCAG
CCGGAAAGACTACCCGAACCTGATCATTGATATTCTAAAGGTTGCAACCG
CTATGCTAGACGGCGAGATCGAGTACCGTCGAGGGAACTTTACGCAGGCG
TTTGAGAGTCTGCGGGAAGCGATTCGTCATGACGATGCGCTGATGTATAC
CGAACCTTGGGGGTGGATGTTGCCTACGCGACATGCATATGCAGCCTTGT
CGCTGGAGCAGGGCCATGTGGAGGAAGCTGCGAGAGCGTATGCGGAGGAT
TTAGGTCTTGATGCAGAAATTACTCGAGCGCATCAGCATCCGAATAATGT
GTGGGCGCTGCATGGGTATCATGAGTGTCTGATGAGATTGGGACGCAGAG
CAGAGGCACTTATCATTAAACAGCAGCTGGATGTTGCTTTGAGTGTGGCT
GATGTGGATATTAAGTCTTCGTGCTTTTGTCGGCTGGGTGTGCAGGGATC
GCAGTGTTGTTCGTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002559-T1.utr3p1 | KJC3_002559-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002559-T1.utr5p1 | KJC3_002559-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR011990 |
| DBxref | InterPro:IPR019734 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:2918428..2920276 - |
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