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KJC3_002564-T1, KJC3_002564-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_002564-T1
Unique NameKJC3_002564-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:2928413..2930232+

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_002564-T1 ID=KJC3_002564-T1|Name=KJC3_002564-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1820bp|location=Sequence derived from alignment at ch2:2928413..2930232+ (Aspergillus niger KJC3)
ATGCGGATTCACGTTATCCAATATCCCGCAATCCAACCCTTAAATTTAAA
GCAGGATAAACTCGTCAGCATGAATGCTCGCCGTCGGGTGCACCTTGCCG
GAAAGGCTTGCGCACGATGTAGATCGCAGAAGAGGCGATGCGACAGGGCT
ACTCCTCAATGCGGACTATGTCGGAGGTGAGTGCTTGTTTGAAATGGTAT
TTTGATGCCGTGAAATCACTAACACAGACTCTAGACTTCGTCAAGCCTGT
CACTATGAAGGACAGGCGGTATCATCTTCAAGTTCGACACCATCGTCCCC
CCTCGATGCAGAGCTCCACCTTGGAGTGTTGAATTCTAGCCATATCAAAG
ACGCTATTGCTACGAAACTCACATCAGCCCCGAGCGATATCTTTGCGACA
TACATCCAATCCATCCATCCTTGGTTCCCTATTATCGCACTAGCATTACA
GGATCAGCTCCCGAAATCCTGGAGCGAAGCTTCCCTGGATTACACGCTCC
TCGCCCTTTGTATTAGTTTGCTTTGCACCTCCCCTCCTGCCTCTTCAGGG
GACGGGACTCTGTCTGGTCTTCAGTCCACGTACCTACATATCAAGAGCTG
GATTGCAGTGATCGAAGGACTCGGTATTACCTCGCTCAAGATCGTCCAAG
CAAGGACACTGGTCACCCTATTTGAAGTTGCACATGGCTTCTACCCGGCA
GCGTACATCTCTATTGGGACTACTGTCAGAGCTGCCGATGCACTTAAACT
TCATGATTACTCACCTCCATCATCTTCACCGTCTACTAACGAAGAGTCAG
CGAGGGAGGAGGCCGTACTAGTCGGGTGCGCAATCCGTATTTTGGACAGG
TACGGGTCCCCATTCATCCCTCAAACCTATAAGTCCCCTTCGTCCTGACA
ACATTGTAGATATATAACAGTACAATCTGGACATCGTCCACTTCTCACTT
GCTCTACCTTAAAGGGTATTTATGACCCCAACAAAGTCCTCTGGCCCACC
GGCATCGACAAAGACACGGGACATCCTCTCTGGCAACTCTCCCGTCTGTT
CGAGGCGTCCACACTTCTTGATAACATTCACAATGCGTTAAAAAACCCCA
CTTCAGAACGAACATTCAACACAGAAGAAATAAGACTTTTGGTTGAGACA
TCATATACCCTCCGCACGCTCTTAATCGAAGAGGTTGAAGATGCGGACCA
GATATACTCCGGTGGGCTAGGACTTTGTCAGACGTTAGTTGAGCCGCATT
CTACTTTTACAGATCTCCTTGAAATATTCGCATCGATACTGATGTTGCAC
AGTGGTATACTGCTAGCCTACGAGAACGGTACCAAAGTCCAGATTACCGA
TGCACAAACTCTAACTTGCCAAACACTTGCCACATCATCTATAAACCCCC
TTCTCACCACCATAACTGACATGGTCCACCCCTTTGTTAGTGGTGCACAA
GTCTTAGACTTGGATCGCTTTCCTCCCTTTATCACATTTCTTGTGTACAA
AGCGGCACGCATAGTGACAGAGAGGATATGGATGGAAACTGACACCAATG
AGGCCTTGAGAAAGTTACGAATCCTGAGAGGATTCTTACAAATGGTGAAC
GCAAGGTGGTTATGTTGCGGTACGTTGACCCAAGAGCGTCTAGGACTGGG
TTAGCTAACTGTGCGTGAATAGAGTATTACCTTGCCCTTCTCAATGAGGA
TACGGCGCCGCGAATATTAAAATCTATTGAGGGCAGGTAACATTTTATTA
GCTTAAAATTGCAGGAGATAGGCGCCGAAGCAGATTACATCTAATTGGAT
CATAAATAGGCCGAACAAAC
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Coding sequence (CDS) from alignment at ch2:2928413..2930232+

>KJC3_002564-T1 ID=KJC3_002564-T1|Name=KJC3_002564-T1|organism=Aspergillus niger KJC3|type=CDS|length=7500bp|location=Sequence derived from alignment at ch2:2928413..2930232+ (Aspergillus niger KJC3)
ATGCGGATTCACGTTATCCAATATCCCGCAATCCAACCCTTAAATTTAAA
GCAGGATAAACTCGTCAGCATGAATGCTCGCCGTCGGGTGCACCTTGCCG
GAAAGGCTTGCGCACGATGTAGATCGCAGAAGAGGCGATGCGACAGGGCT
ACTCCTCAATGCGGACTATGTCGGAGACTTCGTCAAGCCTGTCACTATGA
AGGACAGGCGGTATCATCTTCAAGTTCGACACCATCGTCCCCCCTCGATG
CAGAGCTCCACCTTGGAGTGTTGAATTCTAGCCATATCAAAGACGCTATT
GCTACGAAACTCACATCAGCCCCGAGCGATATCTTTGCGACATACATCCA
ATCCATCCATCCTTGGTTCCCTATTATCGCACTAGCATTACAGGATCAGC
TCCCGAAATCCTGGAGCGAAGCTTCCCTGGATTACACGCTCCTCGCCCTT
TGTATTAGTTTGCTTTGCACCTCCCCTCCTGCCTCTTCAGGGGACGGGAC
TCTGTCTGGTCTTCAGTCCACGTACCTACATATCAAGAGCTGGATTGCAG
TGATCGAAGGACTCGGTATTACCTCGCTCAAGATCGTCCAAGCAAGGACA
CTGGTCACCCTATTTGAAGTTGCACATGGCTTCTACCCGGCAGCGTACAT
CTCTATTGGGACTACTGTCAGAGCTGCCGATGCACTTAAACTTCATGATT
ACTCACCTCCATCATCTTCACCGTCTACTAACGAAGAGTCAGCGAGGGAG
GAGGCCGTACTAGTCGGGTGCGCAATCCGTATTTTGGACAGATATATAAC
AGTACAATCTGGACATCGTCCACTTCTCACTTGCTCTACCTTAAAGGGTA
TTTATGACCCCAACAAAGTCCTCTGGCCCACCGGCATCGACAAAGACACG
GGACATCCTCTCTGGCAACTCTCCCGTCTGTTCGAGGCGTCCACACTTCT
TGATAACATTCACAATGCGTTAAAAAACCCCACTTCAGAACGAACATTCA
ACACAGAAGAAATAAGACTTTTGGTTGAGACATCATATACCCTCCGCACG
CTCTTAATCGAAGAGGTTGAAGATGCGGACCAGATATACTCCGGTGGGCT
AGGACTTTGTCAGACTGGTATACTGCTAGCCTACGAGAACGGTACCAAAG
TCCAGATTACCGATGCACAAACTCTAACTTGCCAAACACTTGCCACATCA
TCTATAAACCCCCTTCTCACCACCATAACTGACATGGTCCACCCCTTTGT
TAGTGGTGCACAAGTCTTAGACTTGGATCGCTTTCCTCCCTTTATCACAT
TTCTTGTGTACAAAGCGGCACGCATAGTGACAGAGAGGATATGGATGGAA
ACTGACACCAATGAGGCCTTGAGAAAGTTACGAATCCTGAGAGGATTCTT
ACAAATGGTGAACGCAAGGTGGTTATGTTGCGAGTATTACCTTGCCCTTC
TCAATGAGGATACGGCGCCGCGAATATTAAAATCTATTGAGGGCAGGTAA
ATGCGGATTCACGTTATCCAATATCCCGCAATCCAACCCTTAAATTTAAA
GCAGGATAAACTCGTCAGCATGAATGCTCGCCGTCGGGTGCACCTTGCCG
GAAAGGCTTGCGCACGATGTAGATCGCAGAAGAGGCGATGCGACAGGGCT
ACTCCTCAATGCGGACTATGTCGGAGACTTCGTCAAGCCTGTCACTATGA
AGGACAGGCGGTATCATCTTCAAGTTCGACACCATCGTCCCCCCTCGATG
CAGAGCTCCACCTTGGAGTGTTGAATTCTAGCCATATCAAAGACGCTATT
GCTACGAAACTCACATCAGCCCCGAGCGATATCTTTGCGACATACATCCA
ATCCATCCATCCTTGGTTCCCTATTATCGCACTAGCATTACAGGATCAGC
TCCCGAAATCCTGGAGCGAAGCTTCCCTGGATTACACGCTCCTCGCCCTT
TGTATTAGTTTGCTTTGCACCTCCCCTCCTGCCTCTTCAGGGGACGGGAC
TCTGTCTGGTCTTCAGTCCACGTACCTACATATCAAGAGCTGGATTGCAG
TGATCGAAGGACTCGGTATTACCTCGCTCAAGATCGTCCAAGCAAGGACA
CTGGTCACCCTATTTGAAGTTGCACATGGCTTCTACCCGGCAGCGTACAT
CTCTATTGGGACTACTGTCAGAGCTGCCGATGCACTTAAACTTCATGATT
ACTCACCTCCATCATCTTCACCGTCTACTAACGAAGAGTCAGCGAGGGAG
GAGGCCGTACTAGTCGGGTGCGCAATCCGTATTTTGGACAGATATATAAC
AGTACAATCTGGACATCGTCCACTTCTCACTTGCTCTACCTTAAAGGGTA
TTTATGACCCCAACAAAGTCCTCTGGCCCACCGGCATCGACAAAGACACG
GGACATCCTCTCTGGCAACTCTCCCGTCTGTTCGAGGCGTCCACACTTCT
TGATAACATTCACAATGCGTTAAAAAACCCCACTTCAGAACGAACATTCA
ACACAGAAGAAATAAGACTTTTGGTTGAGACATCATATACCCTCCGCACG
CTCTTAATCGAAGAGGTTGAAGATGCGGACCAGATATACTCCGGTGGGCT
AGGACTTTGTCAGACTGGTATACTGCTAGCCTACGAGAACGGTACCAAAG
TCCAGATTACCGATGCACAAACTCTAACTTGCCAAACACTTGCCACATCA
TCTATAAACCCCCTTCTCACCACCATAACTGACATGGTCCACCCCTTTGT
TAGTGGTGCACAAGTCTTAGACTTGGATCGCTTTCCTCCCTTTATCACAT
TTCTTGTGTACAAAGCGGCACGCATAGTGACAGAGAGGATATGGATGGAA
ACTGACACCAATGAGGCCTTGAGAAAGTTACGAATCCTGAGAGGATTCTT
ACAAATGGTGAACGCAAGGTGGTTATGTTGCGAGTATTACCTTGCCCTTC
TCAATGAGGATACGGCGCCGCGAATATTAAAATCTATTGAGGGCAGGTAA
ATGCGGATTCACGTTATCCAATATCCCGCAATCCAACCCTTAAATTTAAA
GCAGGATAAACTCGTCAGCATGAATGCTCGCCGTCGGGTGCACCTTGCCG
GAAAGGCTTGCGCACGATGTAGATCGCAGAAGAGGCGATGCGACAGGGCT
ACTCCTCAATGCGGACTATGTCGGAGACTTCGTCAAGCCTGTCACTATGA
AGGACAGGCGGTATCATCTTCAAGTTCGACACCATCGTCCCCCCTCGATG
CAGAGCTCCACCTTGGAGTGTTGAATTCTAGCCATATCAAAGACGCTATT
GCTACGAAACTCACATCAGCCCCGAGCGATATCTTTGCGACATACATCCA
ATCCATCCATCCTTGGTTCCCTATTATCGCACTAGCATTACAGGATCAGC
TCCCGAAATCCTGGAGCGAAGCTTCCCTGGATTACACGCTCCTCGCCCTT
TGTATTAGTTTGCTTTGCACCTCCCCTCCTGCCTCTTCAGGGGACGGGAC
TCTGTCTGGTCTTCAGTCCACGTACCTACATATCAAGAGCTGGATTGCAG
TGATCGAAGGACTCGGTATTACCTCGCTCAAGATCGTCCAAGCAAGGACA
CTGGTCACCCTATTTGAAGTTGCACATGGCTTCTACCCGGCAGCGTACAT
CTCTATTGGGACTACTGTCAGAGCTGCCGATGCACTTAAACTTCATGATT
ACTCACCTCCATCATCTTCACCGTCTACTAACGAAGAGTCAGCGAGGGAG
GAGGCCGTACTAGTCGGGTGCGCAATCCGTATTTTGGACAGATATATAAC
AGTACAATCTGGACATCGTCCACTTCTCACTTGCTCTACCTTAAAGGGTA
TTTATGACCCCAACAAAGTCCTCTGGCCCACCGGCATCGACAAAGACACG
GGACATCCTCTCTGGCAACTCTCCCGTCTGTTCGAGGCGTCCACACTTCT
TGATAACATTCACAATGCGTTAAAAAACCCCACTTCAGAACGAACATTCA
ACACAGAAGAAATAAGACTTTTGGTTGAGACATCATATACCCTCCGCACG
CTCTTAATCGAAGAGGTTGAAGATGCGGACCAGATATACTCCGGTGGGCT
AGGACTTTGTCAGACTGGTATACTGCTAGCCTACGAGAACGGTACCAAAG
TCCAGATTACCGATGCACAAACTCTAACTTGCCAAACACTTGCCACATCA
TCTATAAACCCCCTTCTCACCACCATAACTGACATGGTCCACCCCTTTGT
TAGTGGTGCACAAGTCTTAGACTTGGATCGCTTTCCTCCCTTTATCACAT
TTCTTGTGTACAAAGCGGCACGCATAGTGACAGAGAGGATATGGATGGAA
ACTGACACCAATGAGGCCTTGAGAAAGTTACGAATCCTGAGAGGATTCTT
ACAAATGGTGAACGCAAGGTGGTTATGTTGCGAGTATTACCTTGCCCTTC
TCAATGAGGATACGGCGCCGCGAATATTAAAATCTATTGAGGGCAGGTAA
ATGCGGATTCACGTTATCCAATATCCCGCAATCCAACCCTTAAATTTAAA
GCAGGATAAACTCGTCAGCATGAATGCTCGCCGTCGGGTGCACCTTGCCG
GAAAGGCTTGCGCACGATGTAGATCGCAGAAGAGGCGATGCGACAGGGCT
ACTCCTCAATGCGGACTATGTCGGAGACTTCGTCAAGCCTGTCACTATGA
AGGACAGGCGGTATCATCTTCAAGTTCGACACCATCGTCCCCCCTCGATG
CAGAGCTCCACCTTGGAGTGTTGAATTCTAGCCATATCAAAGACGCTATT
GCTACGAAACTCACATCAGCCCCGAGCGATATCTTTGCGACATACATCCA
ATCCATCCATCCTTGGTTCCCTATTATCGCACTAGCATTACAGGATCAGC
TCCCGAAATCCTGGAGCGAAGCTTCCCTGGATTACACGCTCCTCGCCCTT
TGTATTAGTTTGCTTTGCACCTCCCCTCCTGCCTCTTCAGGGGACGGGAC
TCTGTCTGGTCTTCAGTCCACGTACCTACATATCAAGAGCTGGATTGCAG
TGATCGAAGGACTCGGTATTACCTCGCTCAAGATCGTCCAAGCAAGGACA
CTGGTCACCCTATTTGAAGTTGCACATGGCTTCTACCCGGCAGCGTACAT
CTCTATTGGGACTACTGTCAGAGCTGCCGATGCACTTAAACTTCATGATT
ACTCACCTCCATCATCTTCACCGTCTACTAACGAAGAGTCAGCGAGGGAG
GAGGCCGTACTAGTCGGGTGCGCAATCCGTATTTTGGACAGATATATAAC
AGTACAATCTGGACATCGTCCACTTCTCACTTGCTCTACCTTAAAGGGTA
TTTATGACCCCAACAAAGTCCTCTGGCCCACCGGCATCGACAAAGACACG
GGACATCCTCTCTGGCAACTCTCCCGTCTGTTCGAGGCGTCCACACTTCT
TGATAACATTCACAATGCGTTAAAAAACCCCACTTCAGAACGAACATTCA
ACACAGAAGAAATAAGACTTTTGGTTGAGACATCATATACCCTCCGCACG
CTCTTAATCGAAGAGGTTGAAGATGCGGACCAGATATACTCCGGTGGGCT
AGGACTTTGTCAGACTGGTATACTGCTAGCCTACGAGAACGGTACCAAAG
TCCAGATTACCGATGCACAAACTCTAACTTGCCAAACACTTGCCACATCA
TCTATAAACCCCCTTCTCACCACCATAACTGACATGGTCCACCCCTTTGT
TAGTGGTGCACAAGTCTTAGACTTGGATCGCTTTCCTCCCTTTATCACAT
TTCTTGTGTACAAAGCGGCACGCATAGTGACAGAGAGGATATGGATGGAA
ACTGACACCAATGAGGCCTTGAGAAAGTTACGAATCCTGAGAGGATTCTT
ACAAATGGTGAACGCAAGGTGGTTATGTTGCGAGTATTACCTTGCCCTTC
TCAATGAGGATACGGCGCCGCGAATATTAAAATCTATTGAGGGCAGGTAA
ATGCGGATTCACGTTATCCAATATCCCGCAATCCAACCCTTAAATTTAAA
GCAGGATAAACTCGTCAGCATGAATGCTCGCCGTCGGGTGCACCTTGCCG
GAAAGGCTTGCGCACGATGTAGATCGCAGAAGAGGCGATGCGACAGGGCT
ACTCCTCAATGCGGACTATGTCGGAGACTTCGTCAAGCCTGTCACTATGA
AGGACAGGCGGTATCATCTTCAAGTTCGACACCATCGTCCCCCCTCGATG
CAGAGCTCCACCTTGGAGTGTTGAATTCTAGCCATATCAAAGACGCTATT
GCTACGAAACTCACATCAGCCCCGAGCGATATCTTTGCGACATACATCCA
ATCCATCCATCCTTGGTTCCCTATTATCGCACTAGCATTACAGGATCAGC
TCCCGAAATCCTGGAGCGAAGCTTCCCTGGATTACACGCTCCTCGCCCTT
TGTATTAGTTTGCTTTGCACCTCCCCTCCTGCCTCTTCAGGGGACGGGAC
TCTGTCTGGTCTTCAGTCCACGTACCTACATATCAAGAGCTGGATTGCAG
TGATCGAAGGACTCGGTATTACCTCGCTCAAGATCGTCCAAGCAAGGACA
CTGGTCACCCTATTTGAAGTTGCACATGGCTTCTACCCGGCAGCGTACAT
CTCTATTGGGACTACTGTCAGAGCTGCCGATGCACTTAAACTTCATGATT
ACTCACCTCCATCATCTTCACCGTCTACTAACGAAGAGTCAGCGAGGGAG
GAGGCCGTACTAGTCGGGTGCGCAATCCGTATTTTGGACAGATATATAAC
AGTACAATCTGGACATCGTCCACTTCTCACTTGCTCTACCTTAAAGGGTA
TTTATGACCCCAACAAAGTCCTCTGGCCCACCGGCATCGACAAAGACACG
GGACATCCTCTCTGGCAACTCTCCCGTCTGTTCGAGGCGTCCACACTTCT
TGATAACATTCACAATGCGTTAAAAAACCCCACTTCAGAACGAACATTCA
ACACAGAAGAAATAAGACTTTTGGTTGAGACATCATATACCCTCCGCACG
CTCTTAATCGAAGAGGTTGAAGATGCGGACCAGATATACTCCGGTGGGCT
AGGACTTTGTCAGACTGGTATACTGCTAGCCTACGAGAACGGTACCAAAG
TCCAGATTACCGATGCACAAACTCTAACTTGCCAAACACTTGCCACATCA
TCTATAAACCCCCTTCTCACCACCATAACTGACATGGTCCACCCCTTTGT
TAGTGGTGCACAAGTCTTAGACTTGGATCGCTTTCCTCCCTTTATCACAT
TTCTTGTGTACAAAGCGGCACGCATAGTGACAGAGAGGATATGGATGGAA
ACTGACACCAATGAGGCCTTGAGAAAGTTACGAATCCTGAGAGGATTCTT
ACAAATGGTGAACGCAAGGTGGTTATGTTGCGAGTATTACCTTGCCCTTC
TCAATGAGGATACGGCGCCGCGAATATTAAAATCTATTGAGGGCAGGTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
GO:0042025host cell nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006351transcription, DNA-templated
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0008270zinc ion binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_002564KJC3_002564Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002564-T1KJC3_002564-T1-proteinAspergillus niger KJC3polypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002564-T1.exon1KJC3_002564-T1.exon1Aspergillus niger KJC3exon
KJC3_002564-T1.exon2KJC3_002564-T1.exon2Aspergillus niger KJC3exon
KJC3_002564-T1.exon3KJC3_002564-T1.exon3Aspergillus niger KJC3exon
KJC3_002564-T1.exon4KJC3_002564-T1.exon4Aspergillus niger KJC3exon
KJC3_002564-T1.exon5KJC3_002564-T1.exon5Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002564-T1.cdsKJC3_002564-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002564-T1.utr3p1KJC3_002564-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR007219
DBxrefInterPro:IPR036864
DBxrefInterPro:IPR001138
DBxrefPFAM:PF00172
DBxrefPFAM:PF04082
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:2928413..2930232 +
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