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KJC3_002573-T1, KJC3_002573-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_002573-T1
Unique NameKJC3_002573-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:2951989..2953533-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_002573-T1 ID=KJC3_002573-T1|Name=KJC3_002573-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1545bp|location=Sequence derived from alignment at ch2:2951989..2953533- (Aspergillus niger KJC3)
ATGATCAGATGTCCCATATGCCAGAAACACGTCCCTCTATCCAAAGTCAA
CGAGCATCTCGATTCTGGCTGTCAAGCGTTCATCGCAACCACCCACCCAC
AGACTACGACATCGTCTACTCTGATCGAAAATGACTGCAATCCTCAAGAA
AAAAGGAAGAACATCAGTGAGAGAATCACAGGTCAACAGGACCGTTCGCT
AGTGTTACCGGAAGCTCAAAGAGAGCGGTCTCAACCGGAGTCCAATACCG
CACGAAAGAAGCCACATACGGGATCAGCAACGGAGCAATTACATCTTCGG
AATGCACCTTTAGCTGAGCAAGTCCGGCCACGATGCTTCGATGAAATCGT
CGGTCAGAAGTCCTTGATCGGGCCAAATGGAACACTCAGGCGGTTGATTG
AACAAGATGAGCTTCCGAACCTGATTTTATGGGGGCCCCCAGGAAGTGGT
AAAACTACAATTGCCAGGATCGTCGGGCCAATGATGAGGAGAAAGGTCTA
CGAGATCAGTAGCTTGACTACAACAACGACAGAGTACAGAGACATTGTCA
CCAAGGCTACACAGGATGTGCACGATGGTCGGAATAAATCCATCATATTC
TGTGATGAGATACATCGACTCACGCGTCCACAACAAGATATTTTTCTCGA
TGCTATGCGAAGGAATAAAATCACTCTCATCGGTGCGACGACAGAGAACC
CATCATTGAATCTTCATCATACTTTTGTCTACAAATGCAGGGTCTTCACT
GTCGCAAAGCCAACTACCAATGATTTGGCCGCTATTCTTCGTCGTTCACT
ACAATCACAAACCCACCTGAAATCATCCCCTCTCCTGGATGATGAATTTC
TTCAATACATAGCTGAATTCGCTGATGGGGACGGTAGAACCGCACTGAAC
GTTCTGGAGATAGCTACGGATCTCTGCAGACGACCAAATATGACAAAGGA
GAAGCTGAAGCATTCATTAACCAAGAGCTTACTCTACGACCGTTCGGGTG
ACCAGCACTATGACACCATTTCAGCACTTCACAAGTCAATTCGAGGCAGT
GATCCCGATGCTGCGCTATATTACCTTGTACGAATGCTCCAGCCAGGCGA
GAACCCTTTGTTCATCGCTCGCCGGCTTATCGTGGCGACGTCGGAGGACA
TTGGACTGGCGAATAATGTGTTGCAAACATATGCAACCTCAGTCTACTTG
ATGATTGAGAAGCTAGGGATTAATGAAGCACAGTCTGCTTTGGCTCAACT
GGTGATAACAATGTGTTTGTCGAAGAAGAGCACTCGATCCTATCGTGGGC
TTAATAATGCCCTTGCTGCAGTGAAGGAGCCTGGGATGGGCGATCTTCCA
ATTCCTTTTCACATCTTGGATCGTAGACACGAGCTTCTGAGAGAGGCTGA
CCGGGTCGTGACTACTGACTCCCAACAAAGTCAGAAAAGGCTGCCATCTA
CCCAGGGGTTTCTTCCGCATGCTCTCGAAGGTCGGAAGTTTCTGGAAGAT
ACTGATTTTCTGTTCAAACGAGATCCCGACCTAAGTTATGGGTGA
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Coding sequence (CDS) from alignment at ch2:2951989..2953533-

>KJC3_002573-T1 ID=KJC3_002573-T1|Name=KJC3_002573-T1|organism=Aspergillus niger KJC3|type=CDS|length=1545bp|location=Sequence derived from alignment at ch2:2951989..2953533- (Aspergillus niger KJC3)
ATGATCAGATGTCCCATATGCCAGAAACACGTCCCTCTATCCAAAGTCAA
CGAGCATCTCGATTCTGGCTGTCAAGCGTTCATCGCAACCACCCACCCAC
AGACTACGACATCGTCTACTCTGATCGAAAATGACTGCAATCCTCAAGAA
AAAAGGAAGAACATCAGTGAGAGAATCACAGGTCAACAGGACCGTTCGCT
AGTGTTACCGGAAGCTCAAAGAGAGCGGTCTCAACCGGAGTCCAATACCG
CACGAAAGAAGCCACATACGGGATCAGCAACGGAGCAATTACATCTTCGG
AATGCACCTTTAGCTGAGCAAGTCCGGCCACGATGCTTCGATGAAATCGT
CGGTCAGAAGTCCTTGATCGGGCCAAATGGAACACTCAGGCGGTTGATTG
AACAAGATGAGCTTCCGAACCTGATTTTATGGGGGCCCCCAGGAAGTGGT
AAAACTACAATTGCCAGGATCGTCGGGCCAATGATGAGGAGAAAGGTCTA
CGAGATCAGTAGCTTGACTACAACAACGACAGAGTACAGAGACATTGTCA
CCAAGGCTACACAGGATGTGCACGATGGTCGGAATAAATCCATCATATTC
TGTGATGAGATACATCGACTCACGCGTCCACAACAAGATATTTTTCTCGA
TGCTATGCGAAGGAATAAAATCACTCTCATCGGTGCGACGACAGAGAACC
CATCATTGAATCTTCATCATACTTTTGTCTACAAATGCAGGGTCTTCACT
GTCGCAAAGCCAACTACCAATGATTTGGCCGCTATTCTTCGTCGTTCACT
ACAATCACAAACCCACCTGAAATCATCCCCTCTCCTGGATGATGAATTTC
TTCAATACATAGCTGAATTCGCTGATGGGGACGGTAGAACCGCACTGAAC
GTTCTGGAGATAGCTACGGATCTCTGCAGACGACCAAATATGACAAAGGA
GAAGCTGAAGCATTCATTAACCAAGAGCTTACTCTACGACCGTTCGGGTG
ACCAGCACTATGACACCATTTCAGCACTTCACAAGTCAATTCGAGGCAGT
GATCCCGATGCTGCGCTATATTACCTTGTACGAATGCTCCAGCCAGGCGA
GAACCCTTTGTTCATCGCTCGCCGGCTTATCGTGGCGACGTCGGAGGACA
TTGGACTGGCGAATAATGTGTTGCAAACATATGCAACCTCAGTCTACTTG
ATGATTGAGAAGCTAGGGATTAATGAAGCACAGTCTGCTTTGGCTCAACT
GGTGATAACAATGTGTTTGTCGAAGAAGAGCACTCGATCCTATCGTGGGC
TTAATAATGCCCTTGCTGCAGTGAAGGAGCCTGGGATGGGCGATCTTCCA
ATTCCTTTTCACATCTTGGATCGTAGACACGAGCTTCTGAGAGAGGCTGA
CCGGGTCGTGACTACTGACTCCCAACAAAGTCAGAAAAGGCTGCCATCTA
CCCAGGGGTTTCTTCCGCATGCTCTCGAAGGTCGGAAGTTTCTGGAAGAT
ACTGATTTTCTGTTCAAACGAGATCCCGACCTAAGTTATGGGTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006260DNA replication
GO:0006281DNA repair
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO:0003677DNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_002573KJC3_002573Aspergillus niger KJC3gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002573-T1.cdsKJC3_002573-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002573-T1.exon1KJC3_002573-T1.exon1Aspergillus niger KJC3exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002573-T1KJC3_002573-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR008921
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR003959
DBxrefInterPro:IPR032423
DBxrefInterPro:IPR021886
DBxrefInterPro:IPR003593
DBxrefInterPro:IPR006642
DBxrefPFAM:PF05496
DBxrefPFAM:PF12002
DBxrefPFAM:PF16193
DBxrefPFAM:PF07728
DBxrefPFAM:PF00004
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:2951989..2953533 -
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