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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:3103526..3105034+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_002624-T1 ID=KJC3_002624-T1|Name=KJC3_002624-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1509bp|location=Sequence derived from alignment at ch2:3103526..3105034+ (Aspergillus niger KJC3)
CTACACTCCTTATCTGCGCAGATAACGCCGCCCACCTGCCCCCAGACAAT
TATCAAACTCAGCATCCAAGATGTCCTGGGCAGAAGTCTCCCCAAGCCGA
TACGAGCGTCCGTTCGACTCAATCGAAACTTTTTATCGTGCTGTTGCTGC
CGCCGGTGCCCCACTGAACAAAGAACACTACCTGATTACCTGCACTCTCC
AACTATCGCCTCTGCCTCCCGCCACTGCAGTTGAACAAGCCTGGAAAGCC
CTCCGCCATGTCTACCCCCAATTGGCCGCTGAACCAGAAACAGACAGCAA
CGGCAGCGATCGCTTTGTCTATGAGGCAATCACCACCACCACCCAGCTCG
ACAGCTGGGCCAAAGAGACTTTCCATGTCGACACCGATCGAACTGCCAAT
GACCTCTACGAGCAGCTGACACCATCACCGCGCGTCCACCTCTACTACCT
CCCCAGTACCTCCGAGGTGGTCTTCCGCACCCCCCACTGGCGCATCGACG
GCATCGGCCTGCATCACATGCAATCCGCCTTCCTGCAACTCCTCGCAGAC
GGAACCGTTCATCCCATCGACGGGACCGAACCCTCGCGTCTCTGTCCCGC
TGTGGACCAAGCCGTCGCGGACTCCGATCTCCCCAAGGCAATCCCTCTAG
ACGAAGCCACCGCCACAGCTGCCTCCAACAAAGAACTCCAACCATGCCTC
ACCCAAACTGAGAATGGCAATCTCATGCTTCCAACTCTCCCCAACGTCCT
CCCCACCACCCCCAAACGCATCCTCCGCCACATCGACAGCGCTACTACCG
CCCGTCTCCTGGATGCATGCTCCGCCCACAACATCACAATCACAGCCGCC
ACCCACGCTGCCCTCGCCCTAACAGGCCTCCAATTCGCCCTCCACCTGGA
AAAGAAACCAGACTACGTCGGGTTCAATCCCATCGACCTGCGTCGCTACC
TCCCCCAACCGTGGAACGGCTCTGCAGCGGCCGTCTCGCTCTACCATACT
GGCCTGCCGTTCCGCATCCCACTCTACCCAGCGCAGGTCGAGAAACGGGA
AGAATTTATTCGCCTTGCCCAGGAATTTACATCACTCTACAAGAGAAATC
TGGCTAAAGAGGCGCCACAGAACTTGTTCGATTTTTTGCCTACATATGTG
GGTCGTGTTATGCAGGTGTTGGGCGCTGCGCCGCCGGATCCGCTGCTCGC
TCCAGCACACCCGGAGTTGAGTTCTATGGGGAGGGTGAATCAGTTGCTCA
AGACGGAGGTGGAGGGAAAGGAGTGGACGGTGAAGGTGGAGGAGTGGTGG
GTGGCTATTGAGGTTATTAATCGTTTGTTGTTGACCCAGGTATGGACGTT
TAATGGGGAGTTGGTGCTGTCAGTGCATTGGAATGAGGCGTTTTATGAGA
GAATTTTCGTAGAGGGTGTGTTTGAGAGGTGGAGAGAGGAGTTGATTGGG
GGGTTGTTGGAGTAGATTAATTCTTATATCAGTAAACAGAGTGCAGCAGA
TTACAGAAG back to topCoding sequence (CDS) from alignment at ch2:3103526..3105034+ >KJC3_002624-T1 ID=KJC3_002624-T1|Name=KJC3_002624-T1|organism=Aspergillus niger KJC3|type=CDS|length=1395bp|location=Sequence derived from alignment at ch2:3103526..3105034+ (Aspergillus niger KJC3)
ATGTCCTGGGCAGAAGTCTCCCCAAGCCGATACGAGCGTCCGTTCGACTC
AATCGAAACTTTTTATCGTGCTGTTGCTGCCGCCGGTGCCCCACTGAACA
AAGAACACTACCTGATTACCTGCACTCTCCAACTATCGCCTCTGCCTCCC
GCCACTGCAGTTGAACAAGCCTGGAAAGCCCTCCGCCATGTCTACCCCCA
ATTGGCCGCTGAACCAGAAACAGACAGCAACGGCAGCGATCGCTTTGTCT
ATGAGGCAATCACCACCACCACCCAGCTCGACAGCTGGGCCAAAGAGACT
TTCCATGTCGACACCGATCGAACTGCCAATGACCTCTACGAGCAGCTGAC
ACCATCACCGCGCGTCCACCTCTACTACCTCCCCAGTACCTCCGAGGTGG
TCTTCCGCACCCCCCACTGGCGCATCGACGGCATCGGCCTGCATCACATG
CAATCCGCCTTCCTGCAACTCCTCGCAGACGGAACCGTTCATCCCATCGA
CGGGACCGAACCCTCGCGTCTCTGTCCCGCTGTGGACCAAGCCGTCGCGG
ACTCCGATCTCCCCAAGGCAATCCCTCTAGACGAAGCCACCGCCACAGCT
GCCTCCAACAAAGAACTCCAACCATGCCTCACCCAAACTGAGAATGGCAA
TCTCATGCTTCCAACTCTCCCCAACGTCCTCCCCACCACCCCCAAACGCA
TCCTCCGCCACATCGACAGCGCTACTACCGCCCGTCTCCTGGATGCATGC
TCCGCCCACAACATCACAATCACAGCCGCCACCCACGCTGCCCTCGCCCT
AACAGGCCTCCAATTCGCCCTCCACCTGGAAAAGAAACCAGACTACGTCG
GGTTCAATCCCATCGACCTGCGTCGCTACCTCCCCCAACCGTGGAACGGC
TCTGCAGCGGCCGTCTCGCTCTACCATACTGGCCTGCCGTTCCGCATCCC
ACTCTACCCAGCGCAGGTCGAGAAACGGGAAGAATTTATTCGCCTTGCCC
AGGAATTTACATCACTCTACAAGAGAAATCTGGCTAAAGAGGCGCCACAG
AACTTGTTCGATTTTTTGCCTACATATGTGGGTCGTGTTATGCAGGTGTT
GGGCGCTGCGCCGCCGGATCCGCTGCTCGCTCCAGCACACCCGGAGTTGA
GTTCTATGGGGAGGGTGAATCAGTTGCTCAAGACGGAGGTGGAGGGAAAG
GAGTGGACGGTGAAGGTGGAGGAGTGGTGGGTGGCTATTGAGGTTATTAA
TCGTTTGTTGTTGACCCAGGTATGGACGTTTAATGGGGAGTTGGTGCTGT
CAGTGCATTGGAATGAGGCGTTTTATGAGAGAATTTTCGTAGAGGGTGTG
TTTGAGAGGTGGAGAGAGGAGTTGATTGGGGGGTTGTTGGAGTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002624-T1.utr5p1 | KJC3_002624-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002624-T1.utr3p1 | KJC3_002624-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR023213 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:3103526..3105034 + |
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