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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:3113687..3114361- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_002627-T1 ID=KJC3_002627-T1|Name=KJC3_002627-T1|organism=Aspergillus niger KJC3|type=mRNA|length=675bp|location=Sequence derived from alignment at ch2:3113687..3114361- (Aspergillus niger KJC3)
ATCTCATTCGAGTTTCTATTCAAAACTAGCCAAGCAAACATCCAGCATGA
TGAAGTCTATCCTCTCTCTCGCACTCTATACAGCTACCGCCCTAGCCCAG
GGCATCTACATCAACTCCCCCGCCGCCGGCACGGAGCTCCAAGCCGGAGA
AACAGTAACAGTGCAGCTTGTCCGTCCGGTACGTCCATCCCACTCTCCAC
CTGTATATTCTTTTGGATCTACCCCACGACTACACCAGATTCACTCTCAC
ACTAACCCCTTTCGCGAAATAGGTCTTCAGCGAAAATGTCGCCGAAATCG
GCATCGCCATCGGCATCGAATCCTGCTCTGGTTCCTCAGGGTGCCCCAAA
CCCGACTCCGAGATCGGAAACCTCCTCTACAGCGGTCCCTATGACCCGCA
GTCCAACGGACCTCCTGACCCGTATGAGAACTTCACTATCACGGTGCCGG
ATGTGACGGGGCCTGCGCAGATTGGTGTTGTCAGGCCGTTTTTGGTTGGG
GTGAGTTCAATTCCTGTTAGATGGATTGGTAGTGTTTGATGGTGGTTTGC
TGATGCGTGTAGCTATCGTATGAGTTTGTGGTGGGGACTGCAGTGACGAA
TGTTACGATTGTTTGAGGTTGGAGTAGTGGGGATAGGTATGTTAGCGTGG
AGGTACATGGGATGGAAGAAAATAG back to topCoding sequence (CDS) from alignment at ch2:3113687..3114361- >KJC3_002627-T1 ID=KJC3_002627-T1|Name=KJC3_002627-T1|organism=Aspergillus niger KJC3|type=CDS|length=1242bp|location=Sequence derived from alignment at ch2:3113687..3114361- (Aspergillus niger KJC3)
CTATCGTATGAGTTTGTGGTGGGGACTGCAGTGACGAATGTTACGATTGT
TTGAGTCTTCAGCGAAAATGTCGCCGAAATCGGCATCGCCATCGGCATCG
AATCCTGCTCTGGTTCCTCAGGGTGCCCCAAACCCGACTCCGAGATCGGA
AACCTCCTCTACAGCGGTCCCTATGACCCGCAGTCCAACGGACCTCCTGA
CCCGTATGAGAACTTCACTATCACGGTGCCGGATGTGACGGGGCCTGCGC
AGATTGGTGTTGTCAGGCCGTTTTTGGTTGGGATGATGAAGTCTATCCTC
TCTCTCGCACTCTATACAGCTACCGCCCTAGCCCAGGGCATCTACATCAA
CTCCCCCGCCGCCGGCACGGAGCTCCAAGCCGGAGAAACAGTAACAGTGC
AGCTTGTCCGTCCGCTATCGTATGAGTTTGTGGTGGGGACTGCAGTGACG
AATGTTACGATTGTTTGAGTCTTCAGCGAAAATGTCGCCGAAATCGGCAT
CGCCATCGGCATCGAATCCTGCTCTGGTTCCTCAGGGTGCCCCAAACCCG
ACTCCGAGATCGGAAACCTCCTCTACAGCGGTCCCTATGACCCGCAGTCC
AACGGACCTCCTGACCCGTATGAGAACTTCACTATCACGGTGCCGGATGT
GACGGGGCCTGCGCAGATTGGTGTTGTCAGGCCGTTTTTGGTTGGGATGA
TGAAGTCTATCCTCTCTCTCGCACTCTATACAGCTACCGCCCTAGCCCAG
GGCATCTACATCAACTCCCCCGCCGCCGGCACGGAGCTCCAAGCCGGAGA
AACAGTAACAGTGCAGCTTGTCCGTCCGCTATCGTATGAGTTTGTGGTGG
GGACTGCAGTGACGAATGTTACGATTGTTTGAGTCTTCAGCGAAAATGTC
GCCGAAATCGGCATCGCCATCGGCATCGAATCCTGCTCTGGTTCCTCAGG
GTGCCCCAAACCCGACTCCGAGATCGGAAACCTCCTCTACAGCGGTCCCT
ATGACCCGCAGTCCAACGGACCTCCTGACCCGTATGAGAACTTCACTATC
ACGGTGCCGGATGTGACGGGGCCTGCGCAGATTGGTGTTGTCAGGCCGTT
TTTGGTTGGGATGATGAAGTCTATCCTCTCTCTCGCACTCTATACAGCTA
CCGCCCTAGCCCAGGGCATCTACATCAACTCCCCCGCCGCCGGCACGGAG
CTCCAAGCCGGAGAAACAGTAACAGTGCAGCTTGTCCGTCCG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002627-T1.utr3p1 | KJC3_002627-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002627-T1.utr5p1 | KJC3_002627-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | SECRETED:SignalP(1-17) |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:3113687..3114361 - |
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