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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:3215519..3217278- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_002665-T1 ID=KJC3_002665-T1|Name=KJC3_002665-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1760bp|location=Sequence derived from alignment at ch2:3215519..3217278- (Aspergillus niger KJC3)
GTTTGGAACGAGCCCGCCGGATGGCAAACTTTCCTTTCTCTCACGATCAA
AAGTTATTCAGATCGGTTCATCCACCTACAGAAGGGCGGAGTGTTCTGGG
CTTTCACGTAGATATGCAATAGTCTGGAAACGACTACGTGGACTAGCACT
ACTACTGCGGCTGTCTATTGACTTATGAGTTGTCAGCTGCATAGTCTATC
CTAATGCCGCATATCAAAGATCTGAACGCCCATGAGCGTCCCCCGGGCGG
CATCAAGCAGCGTTATAAGCAATACCAGAAGTCCACGCCTACGGAGATAG
GGTCTGACGACAGCATTATTGATCTGCAGTCCCTGGACCCCCAAAACCTC
CCAGAGGAAATCTCCTTGACGCACTGGATTTCCAGCGCAGATTTTGAGCC
TGTATTTGACCAATTCCTCGGCACGAATCAGGATCTGCAGAGTGCTCAGC
CTGCTAGGGATGTCCCCGTTTTCAGCCATCGTGCTATTTCCGGTTAGCAT
TATTGCCCCATGGCATTCCATTGTAGAAAAAGCCCTGTTGACATGCTGTA
GGTCTGCAAGTGATTCCCTCGTTGCTTCCACCCGCAGTTCAGGTCGAACT
GTTATCTCGTCTGTTCCACCGGGACTTGTCTAATCCACGGCATCAAACCA
ATCTTCACCTGCACTATGATATCACTTATCCTAGTGCGGTGAACGATGGT
GAAGCGGTCTCGGCCGATAATAGTCCAGTAGGCGCTTATCCACCGTCTTT
CTTTGGAGATGACCCAGCCCGTGTCATAGAGCCTAAAGATCCAAATGTGC
ATAAACCACTTACAGTCCAAAGCATACTGAACAGAAAGTTACGCTGGGTT
ACTCTAGGTGGTCAATATGACTGGACTGCCAAGGTGTATCCGTCGGAGCG
CCCTCCCGAATTCCCCAGGGATATTGCGAAGCTCTTGCATGCCATGTTCC
CAGCCACTGAAGCTCAGGCGGCTATTCTCAATGTCTATTCTGCTGGTGAC
CACCTCAGTCCCCATCGCGACGTCAGCGAGGATTGTGATGTAGGCCTAAT
CAGTGTCAGCTTTGGTTGCGATGGCCTGTTCTTAATCAGTCATGACGATG
GGGAACACTGTGAGATTATTCGCCTTCGCTCCGGAGATGCGGTGTACATG
GATGGCACCTCACGTTTTGCTTGGCATGCAGTACCGAAGATTGTGCCGAA
TACTTGTCCTAAGTGGCTTGCTAATTGGCCATCAAGTCCGCATGATGGTG
CAGCTTCACAGTATGATGCTTGGCGAGGGTGGATGTCGGGCAAGAGAGTC
AACCTCAATGTTCGGCAAATGGAACTCGCGAAACCTCACGAATGATTCGG
GGCGAACCCTTATGGAGCGCAAGCATGCCGGGACCGACCAGGCAGAAAAT
ACCTCTCGAGCGACCTATGGTAGCTAATCAAGCTGCGCAGTGCCTCTGTG
CCATTGAAGGGATTAACGGCACTATCCCATACCGGAGCAGCAAGAAACTA
GTGCATTCACACCCTCTGTGGTTTATCTTCTACGACTCTCGTGGATTTCG
AGTCTGAGAAGTATGCCAATGCTTTTTGTATAGAAGAAGAGCCTTCTCCC
CAAGACATGTGGGTTGGGAGTTGTGTGTCCTGCCGTCAGCAGGGGGATAT
AGCTGGTGAGATAGAACCTTGGTCCAGCTGGCTGGCTTGGGTATTCACTG
TTCACAGTAGCATATAGGAAGGTCGTATATAGTCATACCAGAATTGTTAT
TATATGGATG back to topCoding sequence (CDS) from alignment at ch2:3215519..3217278- >KJC3_002665-T1 ID=KJC3_002665-T1|Name=KJC3_002665-T1|organism=Aspergillus niger KJC3|type=CDS|length=2166bp|location=Sequence derived from alignment at ch2:3215519..3217278- (Aspergillus niger KJC3)
GTCTGCAAGTGATTCCCTCGTTGCTTCCACCCGCAGTTCAGGTCGAACTG
TTATCTCGTCTGTTCCACCGGGACTTGTCTAATCCACGGCATCAAACCAA
TCTTCACCTGCACTATGATATCACTTATCCTAGTGCGGTGAACGATGGTG
AAGCGGTCTCGGCCGATAATAGTCCAGTAGGCGCTTATCCACCGTCTTTC
TTTGGAGATGACCCAGCCCGTGTCATAGAGCCTAAAGATCCAAATGTGCA
TAAACCACTTACAGTCCAAAGCATACTGAACAGAAAGTTACGCTGGGTTA
CTCTAGGTGGTCAATATGACTGGACTGCCAAGGTGTATCCGTCGGAGCGC
CCTCCCGAATTCCCCAGGGATATTGCGAAGCTCTTGCATGCCATGTTCCC
AGCCACTGAAGCTCAGGCGGCTATTCTCAATGTCTATTCTGCTGGTGACC
ACCTCAGTCCCCATCGCGACGTCAGCGAGGATTGTGATGTAGGCCTAATC
AGTGTCAGCTTTGGTTGCGATGGCCTGTTCTTAATCAGTCATGACGATGG
GGAACACTGTGAGATTATTCGCCTTCGCTCCGGAGATGCGGTGTACATGG
ATGGCACCTCACGTTTTGCTTGGCATGCAGTACCGAAGATTGTGCCGAAT
ACTTGTCCTAAGTGGCTTGCTAATTGGCCATCAAGTCCGCATGATGGTGC
AGCTTCACAGTATGATGCTTGGCGAGGGTGGATGTCGGGCAAGAGAGTCA
ACCTCAATGTTCGGCAAATGGAACTCGCGAAACCTCACGAATGAATGCCG
CATATCAAAGATCTGAACGCCCATGAGCGTCCCCCGGGCGGCATCAAGCA
GCGTTATAAGCAATACCAGAAGTCCACGCCTACGGAGATAGGGTCTGACG
ACAGCATTATTGATCTGCAGTCCCTGGACCCCCAAAACCTCCCAGAGGAA
ATCTCCTTGACGCACTGGATTTCCAGCGCAGATTTTGAGCCTGTATTTGA
CCAATTCCTCGGCACGAATCAGGATCTGCAGAGTGCTCAGCCTGCTAGGG
ATGTCCCCGTTTTCAGCCATCGTGCTATTTCCGGTCTGCAAGTGATTCCC
TCGTTGCTTCCACCCGCAGTTCAGGTCGAACTGTTATCTCGTCTGTTCCA
CCGGGACTTGTCTAATCCACGGCATCAAACCAATCTTCACCTGCACTATG
ATATCACTTATCCTAGTGCGGTGAACGATGGTGAAGCGGTCTCGGCCGAT
AATAGTCCAGTAGGCGCTTATCCACCGTCTTTCTTTGGAGATGACCCAGC
CCGTGTCATAGAGCCTAAAGATCCAAATGTGCATAAACCACTTACAGTCC
AAAGCATACTGAACAGAAAGTTACGCTGGGTTACTCTAGGTGGTCAATAT
GACTGGACTGCCAAGGTGTATCCGTCGGAGCGCCCTCCCGAATTCCCCAG
GGATATTGCGAAGCTCTTGCATGCCATGTTCCCAGCCACTGAAGCTCAGG
CGGCTATTCTCAATGTCTATTCTGCTGGTGACCACCTCAGTCCCCATCGC
GACGTCAGCGAGGATTGTGATGTAGGCCTAATCAGTGTCAGCTTTGGTTG
CGATGGCCTGTTCTTAATCAGTCATGACGATGGGGAACACTGTGAGATTA
TTCGCCTTCGCTCCGGAGATGCGGTGTACATGGATGGCACCTCACGTTTT
GCTTGGCATGCAGTACCGAAGATTGTGCCGAATACTTGTCCTAAGTGGCT
TGCTAATTGGCCATCAAGTCCGCATGATGGTGCAGCTTCACAGTATGATG
CTTGGCGAGGGTGGATGTCGGGCAAGAGAGTCAACCTCAATGTTCGGCAA
ATGGAACTCGCGAAACCTCACGAATGAATGCCGCATATCAAAGATCTGAA
CGCCCATGAGCGTCCCCCGGGCGGCATCAAGCAGCGTTATAAGCAATACC
AGAAGTCCACGCCTACGGAGATAGGGTCTGACGACAGCATTATTGATCTG
CAGTCCCTGGACCCCCAAAACCTCCCAGAGGAAATCTCCTTGACGCACTG
GATTTCCAGCGCAGATTTTGAGCCTGTATTTGACCAATTCCTCGGCACGA
ATCAGGATCTGCAGAGTGCTCAGCCTGCTAGGGATGTCCCCGTTTTCAGC
CATCGTGCTATTTCCG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055114 | oxidation-reduction process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0016491 | oxidoreductase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002665-T1.utr3p1 | KJC3_002665-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002665-T1.utr5p1 | KJC3_002665-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR005123 |
| DBxref | InterPro:IPR037151 |
| DBxref | InterPro:IPR027450 |
| DBxref | PFAM:PF13532 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:3215519..3217278 - |
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