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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:3238610..3240934+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_002674-T1 ID=KJC3_002674-T1|Name=KJC3_002674-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2325bp|location=Sequence derived from alignment at ch2:3238610..3240934+ (Aspergillus niger KJC3)
TAATTGCCAACTGCTCACTGAACCACACGATGCTCCTAGTAAACCTACGA
CTACTTCTATTAGTTGCTTTTAGAAATATTTCCTTGCCGAGATAAGCGAG
ACTAGTATACACGATCCGGTCTTTGCCAAATACTTACTCCGTTTCCATAC
TTGCAGCTAACAGGCTCCTATCAGATCTCCATGACAGTTCGGCAAGGCGG
TGAGAGGCGGGATACCCCATACTTCTTTTCTGCCGCCCAACTCAACTACT
CCGACGAGCATCTCCAACTCCCTCTTTCCCTCGCCTTGGCTAATCCTAGT
CGTTCAATTTGCAACCTTCTCGTGTCCTCAATACCCTAGCGCAGGCCGCT
CTCGCCCTCTATAAGGTTTGTGTTTTTCTTTTTTCTCCCGTATCCTTTGG
TGTCCCTCTGGCTTGGAACCCCAGGGATCGTCATCCTCCGCCCAAGCGAT
CATCGCTTTCCCCCCCAGACATCGGCCTTGTTGGCCATTGACTGCCGCCT
TTCATTTCTTTTTCCTCTCCCTTTCCTCCTTTCCCTCGCACATTATGCTA
TCTTCGTGTTTTTACTTCGTTCCATTCCTGTCATGGTCATTGGCTCCCGG
CTGTGACATTCCTCCGTGAAACATCCCCCACGCCTCGCTTCCTGTGTTCT
GGAACGTCATATGAATCACACCACGCCTCATTTGACCATGAGATTCGGAC
TTCGGGATCAGCCTTGAGCAGGAGATCCAACTTACTTAGCTGTGTCTCTC
AGTCAGAGTGACAGAAGAGGCTCCTTATAATGATTCACGTTCGTCCTTTG
TACTACCACCGTTTCGTCTTATCTTTACACTTCACTCTGCCTTCTACCCT
TCTACCAATCCCACATATCAAGCCCATTTCTTATGCCCACAACCTCCAAT
CATCATTTACTGCCCACAATATCCCATAATAAATTCACACTGAGACATTA
TGGCTGAATTTGATTACCCAGTCCGGCCAGGTATCCCCAGCCAGAACCCA
GTTCACCCCGAACCGCCCTACCGTCCTTACTGGGCACGAAGCCCCGTCCA
GTACGCGCAAGACCTTCTTGGATATTCCGAAGATCCAATCGAATACGATA
ACAACGATCGCGATTACTGGGACAACTGCTTCTTCTTCCCCGAAGACTGT
ACTTGGTCTCCGCCAAAGGGCTGGATTATCGAAAAGGAAACACTTGAACA
GGATATCGCGCTTGGAGACTGCTACGAGCAGCACAACGAAGACAACATGA
TACCCGGCCTTCCGGACATAAAAATGCTGGATGCGGAGGCACTCAGTGAC
CTCTTAGAGGATAACCTGTCACCTCCGGAAATTACCTCAATGATGTATGG
ACATTCCTGTTCCTCCGGTGGTAAACATGCTAATGAGCCATGCTTCACAG
GGTATTCGCTACCAATGGCGCTATTTTCGCATACGCATCCTCCCTCCCAT
CCCGGCAGCTGCGCAACCTGAGCGCAACCTACGGTGCCGCGTATACCTGC
TACGCGAAGAATGCATCATGTGGGAACCTTACAGGCGTGAACCCAGCCAG
CCATCCATCATCATATGTGACCACCCCATCTGTATCCCTGGGCGATGTAG
GGTCTATTGTTTTTGAACTGGACGATCTGGTGGCAGTTGTGACAAGAATA
GCCGACAAGGTCCTTCTTGCCGCAGTCGGGCCATCGAAAATAGGAGATGC
AGAAGACGCGGCGACGCCGAACGGGACACAGAGTCATCTGAACGGATCCT
CACAACCCGGAGGCGACGACGCCGCGAATGATGGGAGGACATATGCCAGC
GTTGTAGCAGCCAACGGAGGCCGTCATGGCCCTAGCTCAGACGCGCAACT
CGAAAGCCAGTACGAAATCGACCGGAGCAGTGACCTGGCTCGTCTAGCGA
CTTTGAACCTTTCCGCCTCACCATCTATCCTGCTCGCACTGGAGTCGAAA
TCCGCAGCGTTAGGGAGATTCTTGGGCCAGAAACTGGCGGATCTCGAAAG
TCCTGAAGACTTCTAAAGCATGCACCTCTTATTTCACTCACCCTCAATAC
CTTCTTTCCCGTACCTTCGTCTGTACCAGCTGCATATTACTCTATCTTAT
TTCCTTCGAACAGTGTATCTAATTCGGAACGATCTCGCACGATTCTCCCA
GACGTTTTTTACCTTTTGAGCGTTTCTATTACACCGATGCGATATATTTC
TATCTCATTCTTATCTCACCTTTCTTATTCTCCTGCAATATATTGAATTA
AAACATGTATCTTTGAAGACGACTTACACATACAGAAACACATGTGCGTG
GACGAATCAAGTAAAGACACTAGCT back to topCoding sequence (CDS) from alignment at ch2:3238610..3240934+ >KJC3_002674-T1 ID=KJC3_002674-T1|Name=KJC3_002674-T1|organism=Aspergillus niger KJC3|type=CDS|length=2022bp|location=Sequence derived from alignment at ch2:3238610..3240934+ (Aspergillus niger KJC3)
ATGGCTGAATTTGATTACCCAGTCCGGCCAGGTATCCCCAGCCAGAACCC
AGTTCACCCCGAACCGCCCTACCGTCCTTACTGGGCACGAAGCCCCGTCC
AGTACGCGCAAGACCTTCTTGGATATTCCGAAGATCCAATCGAATACGAT
AACAACGATCGCGATTACTGGGACAACTGCTTCTTCTTCCCCGAAGACTG
TACTTGGTCTCCGCCAAAGGGCTGGATTATCGAAAAGGAAACACTTGAAC
AGGATATCGCGCTTGGAGACTGCTACGAGCAGCACAACGAAGACAACATG
ATACCCGGCCTTCCGGACATAAAAATGCTGGATGCGGAGGCACTCAGTGA
CCTCTTAGAGGATAACCTGTCACCTCCGGAAATTACCTCAATGATGGTAT
TCGCTACCAATGGCGCTATTTTCGCATACGCATCCTCCCTCCCATCCCGG
CAGCTGCGCAACCTGAGCGCAACCTACGGTGCCGCGTATACCTGCTACGC
GAAGAATGCATCATGTGGGAACCTTACAGGCGTGAACCCAGCCAGCCATC
CATCATCATATGTGACCACCCCATCTGTATCCCTGGGCGATGTAGGGTCT
ATTGTTTTTGAACTGGACGATCTGGTGGCAGTTGTGACAAGAATAGCCGA
CAAGGTCCTTCTTGCCGCAGTCGGGCCATCGAAAATAGGAGATGCAGAAG
ACGCGGCGACGCCGAACGGGACACAGAGTCATCTGAACGGATCCTCACAA
CCCGGAGGCGACGACGCCGCGAATGATGGGAGGACATATGCCAGCGTTGT
AGCAGCCAACGGAGGCCGTCATGGCCCTAGCTCAGACGCGCAACTCGAAA
GCCAGTACGAAATCGACCGGAGCAGTGACCTGGCTCGTCTAGCGACTTTG
AACCTTTCCGCCTCACCATCTATCCTGCTCGCACTGGAGTCGAAATCCGC
AGCGTTAGGGAGATTCTTGGGCCAGAAACTGGCGGATCTCGAAAGTCCTG
AAGACTTCTAAATGGCTGAATTTGATTACCCAGTCCGGCCAGGTATCCCC
AGCCAGAACCCAGTTCACCCCGAACCGCCCTACCGTCCTTACTGGGCACG
AAGCCCCGTCCAGTACGCGCAAGACCTTCTTGGATATTCCGAAGATCCAA
TCGAATACGATAACAACGATCGCGATTACTGGGACAACTGCTTCTTCTTC
CCCGAAGACTGTACTTGGTCTCCGCCAAAGGGCTGGATTATCGAAAAGGA
AACACTTGAACAGGATATCGCGCTTGGAGACTGCTACGAGCAGCACAACG
AAGACAACATGATACCCGGCCTTCCGGACATAAAAATGCTGGATGCGGAG
GCACTCAGTGACCTCTTAGAGGATAACCTGTCACCTCCGGAAATTACCTC
AATGATGGTATTCGCTACCAATGGCGCTATTTTCGCATACGCATCCTCCC
TCCCATCCCGGCAGCTGCGCAACCTGAGCGCAACCTACGGTGCCGCGTAT
ACCTGCTACGCGAAGAATGCATCATGTGGGAACCTTACAGGCGTGAACCC
AGCCAGCCATCCATCATCATATGTGACCACCCCATCTGTATCCCTGGGCG
ATGTAGGGTCTATTGTTTTTGAACTGGACGATCTGGTGGCAGTTGTGACA
AGAATAGCCGACAAGGTCCTTCTTGCCGCAGTCGGGCCATCGAAAATAGG
AGATGCAGAAGACGCGGCGACGCCGAACGGGACACAGAGTCATCTGAACG
GATCCTCACAACCCGGAGGCGACGACGCCGCGAATGATGGGAGGACATAT
GCCAGCGTTGTAGCAGCCAACGGAGGCCGTCATGGCCCTAGCTCAGACGC
GCAACTCGAAAGCCAGTACGAAATCGACCGGAGCAGTGACCTGGCTCGTC
TAGCGACTTTGAACCTTTCCGCCTCACCATCTATCCTGCTCGCACTGGAG
TCGAAATCCGCAGCGTTAGGGAGATTCTTGGGCCAGAAACTGGCGGATCT
CGAAAGTCCTGAAGACTTCTAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002674-T1.utr3p1 | KJC3_002674-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:3238610..3240934 + |
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