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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:3240940..3243680- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_002675-T1 ID=KJC3_002675-T1|Name=KJC3_002675-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2741bp|location=Sequence derived from alignment at ch2:3240940..3243680- (Aspergillus niger KJC3)
ATAGTCGATGCACACACGGGCCAACTCATCATCTGCGATCAATCGACCGG
AAAGGATGGCGAACTTCTCCCCAATGGAACCATTTTCACGATGATCCCTT
GCCGGAATCGGAGGGCATCTGAGGGATGAACAAATCGTGGGTGATCCTGA
TTTGCGCCATTGAGGGGTAAACTGCTTTGGGCGGTGACTTCATCGGTCGA
TCCTTTTCCTTTACAGCAACAACATTATTCTACCTTTGCTTTCTTCTCGT
TGCTTTTGGCGCTTAGAGATTTATTCTCATTGCTCGACGTCAATCACATT
TATCAGATCCCGATTTCTTCCCTCTATTTGATATACATATATACACATAT
ATATTTACCGCCTCTTTCCTACCTCCTGGTGGCACACTCCCCTCCTCCTC
CTTCTCATCCTCCGAGCGTCTCGCCGGCATCTGCTTGTCCACGCCCCACT
TCCTCCGCTTCAACAAAGGCCAACAAGCCCCTATCCGTTTGCCGATTCGA
CCGTCTCGACTAGTCGGAGATCGTGCTTCCGGTGTCCTCCACCTCTACCG
CTCCGACTGCAGTTTTTATTCCTCGTGGGCGCCGTTCGACCTTCTTTCCC
CTTGAACAGCTGTGTCCCTGAGAGGCTGCACGCCGTATCTTTTCCTTCCC
CGCAGCAGCAACCATGTCGACTCCTACCAGTCCCGTGGAGCACAAGCTCC
CTCAGCGTTCGGGGACCGTCACTAGCGCCATGACTCGTCGGACTTCCATG
AGTGATGACGAGGCCATTCCCGGCTCCGATAGCAACGAGGTATGCGATGG
GAATAGATTCTCTGCAATTCTAAGGTAGATGGCTGATGATCTTGCGACTA
TTCAGACCACGAACCTCCTCCTCGAGCGTCTCCGTGCTTGGAAGCACATG
TGTGGATATTTGGAAGATTATGTGTCTGCGACGGCCAAGGTGTCCAAGTC
GCAAGCCAAGGATTTCGAGAAGGTTTTGAAGGTGCGCTTGGCTACACTGG
GCTCCTCTCAAAGGGTTGAGCGCCTGTTATACTGATACAATGGATTCCTT
GCGTGCAGACTGTGAACGAACCTCTGCGGGAGAGTCATCATTTCTCCCAG
AGCGCCGGCGGCGTTTCTTCTTGGTTTGAGAACATCCGCGCCAACACTCA
GGTAATATTCCCAGTTACACACACAATGACGACATCGGCTCACAGCTGGC
TCTAGGGCATGGTGAACCTGTACCTGGACTCTGAGAGGAACCTCAAGGGT
TCCGTGCTTCCGACCTTGGAGCGTCTTCACAAGGAAATCAAGGCCAAGTC
GAAGGAATTGCAGAATGGCGCTGCAAAGGGTGCTAAGGCTGTCGACAAGG
CTCGTGGCGTCACTCAGAAGCACATTGAGCTCCTCGCCCAGCACACGGCT
ACACTTGACGCTGCGTCCCATAACAAGATCGACACCGCCCATGATCCTTA
CATTCTCCGTCGAGGTGTCACCCACCGCCTGAACAAGCAGGTTATCGAGG
AGAACAACAACCGTCAGGACCTCATCGCCGTGCAGAACAACTTCCAGCAG
TTCGAGGCTCATGTCCTGCAGACCGTTCAGGGCGCTATGGAGCAGTTCGT
CGTCTACATGGGCGGTCAGCTTGACCGTCACCGCGCCATGTACACGGACA
TTCTGTCCTCGGCGCAAAAGGTCCCTCCGGATTTCGAATGGGTCAACTTC
ATGACCAGAAACGACCACATCCTCGTCAACCCCGACGCACCGCCGCGCTC
CCTCTCCAACATCACCTTCCCTAACCAGGAGCACCGCGCCACCAAGCCCT
TGATCGAGGGTACTCTGGAGCGCAAGTCTCGCGCCATGCTCAAGGGCTAC
AGCAGCGGCTTCTACGTCGTGACACCCGCCCGCTACCTCCACGAGTTCAA
GGACAACGACGATCTCCGCCGCGACCCCGCTCCCGAACTCTCCCTCTACC
TGCCCGACTGCATCATTGGCGCCATCGACGGCTCCAAGTTCAGCGTCAAG
GGCAAGGACGTCTCCAGCGGCAAGGTTGGAAATGCCTTCCACACAAACAC
CGAGCTGAGCTTCAAGGCCGCCAACTCTAACGAGGCCGAGAAGTGGTGGA
CCGTCATCAAGGACGCCACTCGCGCTCCGACTTTCTCTTCTAGCACCGCC
ACCTCGCCAACCAGCCCTGTTGCGGCCGAGAGCTCTCAGCCGCCCGCCTA
TGTCGAGAAGGAGTCCGCTGCTGCTCAGCAGGAACCCACCGCTCAGTCGC
CGGCCACTCCGGCTGCTGTCTCTCGTACCAACACTAGCGGCTCCGGCACT
CTTCCCACCGCTTCTAGTGCCGCGGCACCTCCTGTGACCACTGCTACGGA
GGATAAGGCGTGATAACTATCTATTCTTCTTGGTGTATATGCAACTAACT
TACTTAACTACCCGTATAATACTCCCTTTGCTGTATGCAATTGCTATTCT
GAGCTTGATATTTTGGCTTCCTATTCTCTTCATCCATTCTTGCGTAATCG
ATAGTATGTATAGCACTTGGTATACCTCTTTCTACGTCTATATGGTGAGC
TCGTTTATGGAAATATGTCTGCTTCAGCTGATTGTACGTAAGATGTCGGT
TCCTGTGACAAAGTACCACCAAAAGCAGGTTATTTATCTATAGTCGCTGC
TAGTTTTGAGCTTGCGCTTCGGTGTCTATACCCTTTTCCTTACGAATCTT
CCTCATTACTTGTGATCTTGACATGGAATGTAATACAGAAT back to topCoding sequence (CDS) from alignment at ch2:3240940..3243680- >KJC3_002675-T1 ID=KJC3_002675-T1|Name=KJC3_002675-T1|organism=Aspergillus niger KJC3|type=CDS|length=6012bp|location=Sequence derived from alignment at ch2:3240940..3243680- (Aspergillus niger KJC3)
GGCATGGTGAACCTGTACCTGGACTCTGAGAGGAACCTCAAGGGTTCCGT
GCTTCCGACCTTGGAGCGTCTTCACAAGGAAATCAAGGCCAAGTCGAAGG
AATTGCAGAATGGCGCTGCAAAGGGTGCTAAGGCTGTCGACAAGGCTCGT
GGCGTCACTCAGAAGCACATTGAGCTCCTCGCCCAGCACACGGCTACACT
TGACGCTGCGTCCCATAACAAGATCGACACCGCCCATGATCCTTACATTC
TCCGTCGAGGTGTCACCCACCGCCTGAACAAGCAGGTTATCGAGGAGAAC
AACAACCGTCAGGACCTCATCGCCGTGCAGAACAACTTCCAGCAGTTCGA
GGCTCATGTCCTGCAGACCGTTCAGGGCGCTATGGAGCAGTTCGTCGTCT
ACATGGGCGGTCAGCTTGACCGTCACCGCGCCATGTACACGGACATTCTG
TCCTCGGCGCAAAAGGTCCCTCCGGATTTCGAATGGGTCAACTTCATGAC
CAGAAACGACCACATCCTCGTCAACCCCGACGCACCGCCGCGCTCCCTCT
CCAACATCACCTTCCCTAACCAGGAGCACCGCGCCACCAAGCCCTTGATC
GAGGGTACTCTGGAGCGCAAGTCTCGCGCCATGCTCAAGGGCTACAGCAG
CGGCTTCTACGTCGTGACACCCGCCCGCTACCTCCACGAGTTCAAGGACA
ACGACGATCTCCGCCGCGACCCCGCTCCCGAACTCTCCCTCTACCTGCCC
GACTGCATCATTGGCGCCATCGACGGCTCCAAGTTCAGCGTCAAGGGCAA
GGACGTCTCCAGCGGCAAGGTTGGAAATGCCTTCCACACAAACACCGAGC
TGAGCTTCAAGGCCGCCAACTCTAACGAGGCCGAGAAGTGGTGGACCGTC
ATCAAGGACGCCACTCGCGCTCCGACTTTCTCTTCTAGCACCGCCACCTC
GCCAACCAGCCCTGTTGCGGCCGAGAGCTCTCAGCCGCCCGCCTATGTCG
AGAAGGAGTCCGCTGCTGCTCAGCAGGAACCCACCGCTCAGTCGCCGGCC
ACTCCGGCTGCTGTCTCTCGTACCAACACTAGCGGCTCCGGCACTCTTCC
CACCGCTTCTAGTGCCGCGGCACCTCCTGTGACCACTGCTACGGAGGATA
AGGCGTGAACTGTGAACGAACCTCTGCGGGAGAGTCATCATTTCTCCCAG
AGCGCCGGCGGCGTTTCTTCTTGGTTTGAGAACATCCGCGCCAACACTCA
GACCACGAACCTCCTCCTCGAGCGTCTCCGTGCTTGGAAGCACATGTGTG
GATATTTGGAAGATTATGTGTCTGCGACGGCCAAGGTGTCCAAGTCGCAA
GCCAAGGATTTCGAGAAGGTTTTGAAGATGTCGACTCCTACCAGTCCCGT
GGAGCACAAGCTCCCTCAGCGTTCGGGGACCGTCACTAGCGCCATGACTC
GTCGGACTTCCATGAGTGATGACGAGGCCATTCCCGGCTCCGATAGCAAC
GAGGGCATGGTGAACCTGTACCTGGACTCTGAGAGGAACCTCAAGGGTTC
CGTGCTTCCGACCTTGGAGCGTCTTCACAAGGAAATCAAGGCCAAGTCGA
AGGAATTGCAGAATGGCGCTGCAAAGGGTGCTAAGGCTGTCGACAAGGCT
CGTGGCGTCACTCAGAAGCACATTGAGCTCCTCGCCCAGCACACGGCTAC
ACTTGACGCTGCGTCCCATAACAAGATCGACACCGCCCATGATCCTTACA
TTCTCCGTCGAGGTGTCACCCACCGCCTGAACAAGCAGGTTATCGAGGAG
AACAACAACCGTCAGGACCTCATCGCCGTGCAGAACAACTTCCAGCAGTT
CGAGGCTCATGTCCTGCAGACCGTTCAGGGCGCTATGGAGCAGTTCGTCG
TCTACATGGGCGGTCAGCTTGACCGTCACCGCGCCATGTACACGGACATT
CTGTCCTCGGCGCAAAAGGTCCCTCCGGATTTCGAATGGGTCAACTTCAT
GACCAGAAACGACCACATCCTCGTCAACCCCGACGCACCGCCGCGCTCCC
TCTCCAACATCACCTTCCCTAACCAGGAGCACCGCGCCACCAAGCCCTTG
ATCGAGGGTACTCTGGAGCGCAAGTCTCGCGCCATGCTCAAGGGCTACAG
CAGCGGCTTCTACGTCGTGACACCCGCCCGCTACCTCCACGAGTTCAAGG
ACAACGACGATCTCCGCCGCGACCCCGCTCCCGAACTCTCCCTCTACCTG
CCCGACTGCATCATTGGCGCCATCGACGGCTCCAAGTTCAGCGTCAAGGG
CAAGGACGTCTCCAGCGGCAAGGTTGGAAATGCCTTCCACACAAACACCG
AGCTGAGCTTCAAGGCCGCCAACTCTAACGAGGCCGAGAAGTGGTGGACC
GTCATCAAGGACGCCACTCGCGCTCCGACTTTCTCTTCTAGCACCGCCAC
CTCGCCAACCAGCCCTGTTGCGGCCGAGAGCTCTCAGCCGCCCGCCTATG
TCGAGAAGGAGTCCGCTGCTGCTCAGCAGGAACCCACCGCTCAGTCGCCG
GCCACTCCGGCTGCTGTCTCTCGTACCAACACTAGCGGCTCCGGCACTCT
TCCCACCGCTTCTAGTGCCGCGGCACCTCCTGTGACCACTGCTACGGAGG
ATAAGGCGTGAACTGTGAACGAACCTCTGCGGGAGAGTCATCATTTCTCC
CAGAGCGCCGGCGGCGTTTCTTCTTGGTTTGAGAACATCCGCGCCAACAC
TCAGACCACGAACCTCCTCCTCGAGCGTCTCCGTGCTTGGAAGCACATGT
GTGGATATTTGGAAGATTATGTGTCTGCGACGGCCAAGGTGTCCAAGTCG
CAAGCCAAGGATTTCGAGAAGGTTTTGAAGATGTCGACTCCTACCAGTCC
CGTGGAGCACAAGCTCCCTCAGCGTTCGGGGACCGTCACTAGCGCCATGA
CTCGTCGGACTTCCATGAGTGATGACGAGGCCATTCCCGGCTCCGATAGC
AACGAGGGCATGGTGAACCTGTACCTGGACTCTGAGAGGAACCTCAAGGG
TTCCGTGCTTCCGACCTTGGAGCGTCTTCACAAGGAAATCAAGGCCAAGT
CGAAGGAATTGCAGAATGGCGCTGCAAAGGGTGCTAAGGCTGTCGACAAG
GCTCGTGGCGTCACTCAGAAGCACATTGAGCTCCTCGCCCAGCACACGGC
TACACTTGACGCTGCGTCCCATAACAAGATCGACACCGCCCATGATCCTT
ACATTCTCCGTCGAGGTGTCACCCACCGCCTGAACAAGCAGGTTATCGAG
GAGAACAACAACCGTCAGGACCTCATCGCCGTGCAGAACAACTTCCAGCA
GTTCGAGGCTCATGTCCTGCAGACCGTTCAGGGCGCTATGGAGCAGTTCG
TCGTCTACATGGGCGGTCAGCTTGACCGTCACCGCGCCATGTACACGGAC
ATTCTGTCCTCGGCGCAAAAGGTCCCTCCGGATTTCGAATGGGTCAACTT
CATGACCAGAAACGACCACATCCTCGTCAACCCCGACGCACCGCCGCGCT
CCCTCTCCAACATCACCTTCCCTAACCAGGAGCACCGCGCCACCAAGCCC
TTGATCGAGGGTACTCTGGAGCGCAAGTCTCGCGCCATGCTCAAGGGCTA
CAGCAGCGGCTTCTACGTCGTGACACCCGCCCGCTACCTCCACGAGTTCA
AGGACAACGACGATCTCCGCCGCGACCCCGCTCCCGAACTCTCCCTCTAC
CTGCCCGACTGCATCATTGGCGCCATCGACGGCTCCAAGTTCAGCGTCAA
GGGCAAGGACGTCTCCAGCGGCAAGGTTGGAAATGCCTTCCACACAAACA
CCGAGCTGAGCTTCAAGGCCGCCAACTCTAACGAGGCCGAGAAGTGGTGG
ACCGTCATCAAGGACGCCACTCGCGCTCCGACTTTCTCTTCTAGCACCGC
CACCTCGCCAACCAGCCCTGTTGCGGCCGAGAGCTCTCAGCCGCCCGCCT
ATGTCGAGAAGGAGTCCGCTGCTGCTCAGCAGGAACCCACCGCTCAGTCG
CCGGCCACTCCGGCTGCTGTCTCTCGTACCAACACTAGCGGCTCCGGCAC
TCTTCCCACCGCTTCTAGTGCCGCGGCACCTCCTGTGACCACTGCTACGG
AGGATAAGGCGTGAACTGTGAACGAACCTCTGCGGGAGAGTCATCATTTC
TCCCAGAGCGCCGGCGGCGTTTCTTCTTGGTTTGAGAACATCCGCGCCAA
CACTCAGACCACGAACCTCCTCCTCGAGCGTCTCCGTGCTTGGAAGCACA
TGTGTGGATATTTGGAAGATTATGTGTCTGCGACGGCCAAGGTGTCCAAG
TCGCAAGCCAAGGATTTCGAGAAGGTTTTGAAGATGTCGACTCCTACCAG
TCCCGTGGAGCACAAGCTCCCTCAGCGTTCGGGGACCGTCACTAGCGCCA
TGACTCGTCGGACTTCCATGAGTGATGACGAGGCCATTCCCGGCTCCGAT
AGCAACGAGGGCATGGTGAACCTGTACCTGGACTCTGAGAGGAACCTCAA
GGGTTCCGTGCTTCCGACCTTGGAGCGTCTTCACAAGGAAATCAAGGCCA
AGTCGAAGGAATTGCAGAATGGCGCTGCAAAGGGTGCTAAGGCTGTCGAC
AAGGCTCGTGGCGTCACTCAGAAGCACATTGAGCTCCTCGCCCAGCACAC
GGCTACACTTGACGCTGCGTCCCATAACAAGATCGACACCGCCCATGATC
CTTACATTCTCCGTCGAGGTGTCACCCACCGCCTGAACAAGCAGGTTATC
GAGGAGAACAACAACCGTCAGGACCTCATCGCCGTGCAGAACAACTTCCA
GCAGTTCGAGGCTCATGTCCTGCAGACCGTTCAGGGCGCTATGGAGCAGT
TCGTCGTCTACATGGGCGGTCAGCTTGACCGTCACCGCGCCATGTACACG
GACATTCTGTCCTCGGCGCAAAAGGTCCCTCCGGATTTCGAATGGGTCAA
CTTCATGACCAGAAACGACCACATCCTCGTCAACCCCGACGCACCGCCGC
GCTCCCTCTCCAACATCACCTTCCCTAACCAGGAGCACCGCGCCACCAAG
CCCTTGATCGAGGGTACTCTGGAGCGCAAGTCTCGCGCCATGCTCAAGGG
CTACAGCAGCGGCTTCTACGTCGTGACACCCGCCCGCTACCTCCACGAGT
TCAAGGACAACGACGATCTCCGCCGCGACCCCGCTCCCGAACTCTCCCTC
TACCTGCCCGACTGCATCATTGGCGCCATCGACGGCTCCAAGTTCAGCGT
CAAGGGCAAGGACGTCTCCAGCGGCAAGGTTGGAAATGCCTTCCACACAA
ACACCGAGCTGAGCTTCAAGGCCGCCAACTCTAACGAGGCCGAGAAGTGG
TGGACCGTCATCAAGGACGCCACTCGCGCTCCGACTTTCTCTTCTAGCAC
CGCCACCTCGCCAACCAGCCCTGTTGCGGCCGAGAGCTCTCAGCCGCCCG
CCTATGTCGAGAAGGAGTCCGCTGCTGCTCAGCAGGAACCCACCGCTCAG
TCGCCGGCCACTCCGGCTGCTGTCTCTCGTACCAACACTAGCGGCTCCGG
CACTCTTCCCACCGCTTCTAGTGCCGCGGCACCTCCTGTGACCACTGCTA
CGGAGGATAAGGCGTGAACTGTGAACGAACCTCTGCGGGAGAGTCATCAT
TTCTCCCAGAGCGCCGGCGGCGTTTCTTCTTGGTTTGAGAACATCCGCGC
CAACACTCAGACCACGAACCTCCTCCTCGAGCGTCTCCGTGCTTGGAAGC
ACATGTGTGGATATTTGGAAGATTATGTGTCTGCGACGGCCAAGGTGTCC
AAGTCGCAAGCCAAGGATTTCGAGAAGGTTTTGAAGATGTCGACTCCTAC
CAGTCCCGTGGAGCACAAGCTCCCTCAGCGTTCGGGGACCGTCACTAGCG
CCATGACTCGTCGGACTTCCATGAGTGATGACGAGGCCATTCCCGGCTCC
GATAGCAACGAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002675-T1.utr3p1 | KJC3_002675-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002675-T1.utr5p1 | KJC3_002675-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR043453 |
| DBxref | InterPro:IPR027267 |
| DBxref | InterPro:IPR011993 |
| DBxref | InterPro:IPR001849 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:3240940..3243680 - |
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