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KJC3_002680-T1, KJC3_002680-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_002680-T1
Unique NameKJC3_002680-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:3265303..3267736+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_002680-T1 ID=KJC3_002680-T1|Name=KJC3_002680-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2434bp|location=Sequence derived from alignment at ch2:3265303..3267736+ (Aspergillus niger KJC3)
GGAGCCATTACAGAAGCATTCACATATTCCACCAGCTCTTTTGTGCCTGC
TTTGTTTCATTCCCAGTGTTTACTAGTCCAGCCACACCTGGTAAGAAACC
CGACCGGCTGGAACCTGAGGCCGCAAGAACGGCACAGCCACCGCCGAAAC
CCCGACGATCAGCGTGGTTCCCAGCCGACCGAGTCCTTAGTGACATCGCG
TTTCGATTGGCCTGGACTTCAATCTGTTTGACTTTGATATTAACAAAGGC
TTCTCGAAGCATGTCCCAATAATTTGGATAAGGCGTCATCAGTCGCCTTG
AATTCCCAGACCCGCAAATGGCTACAGGTTCGATATGTTTACGTTGAGCT
GCTCAATCATTTACTTACTAACCGCATCTCAGTGCGAATCTGCGTTTGTG
GTGATGAGGGCACTGGCAAGTCCAGTCTCATCACCTCCCTTGTGAAGGGG
GTGTTCGTCACAAACAAAATCCAGCCTATCCTACCTCAAATTACCATCCC
TCCCACGATCGGTACCCCCGAGAATGTCACGACAACGACGGTGGTGGACA
CCTCCGCTCTTCCGCAGGAGCGCAATAATCTGGCCAGAGAGATCCGGAAG
TCCAATGTAATCCTACTCGTATATTCGGACCATTACAGCTATGAGAGAGT
CGCTCTATTCTGGTTACCATACTTTCGTTCTCTAGGGGTCAATGTCCCCG
TGGTACTATGTGCGAACAAGTCCGATCTCGCCGCAGATCATACCGAGGCC
CAGGTCATTGAGGAGGAAATGCTACCATTGATGGCGGAGTTCAAAGAAAT
CGACTCTTGCATCCGCACCAGCGCTCGTGAACATCGAAATGTCAACGAAG
CCTTCTTTCTCTGTCAGAAAGCAGTGACTCATCCGATTGCGCCGTTGTTT
GACTCCAAGGAATCCTCCCTAAAGCCGGCAGCCATTGCAGCGTTGCAGCG
AATATTCTACCTCTGTGATAAGGATAGGGATGGTTATCTGTCTGATAAAG
AGATCAAGGATTTTCAAATGAGATGCTTTGAGAAGCCATTGAGTGAGGAG
GATTTGGTTCACATTAAGGAGACCATTCAGAGAACGCACCCTCATTCAGT
GACACCCTCAGGCATCGATTGCCGCGGATTTTTGCAGCTGAACAAAATGT
ATGCGGAAAAGGGTCGACATGAGACTGTTTGGATTATCCTACGAGCCTTC
CAATACACAGACAACCTATCGCTACAGGAGAACTTCCTTCACCCGAGGTT
TGACGTACCCCCTTATGCGTCGGCTGAGCTTTCGCCAGAGGGATATCGAT
TCTTTGTGAACCTCTTCCTGCTTTCAGACAAGGATAACGATGGAGGCCTG
AACGATGCTGAGCTAGCATCGTTGTTCGCGCCCACCCCGGGATTGCCTGC
TTCATGGGCGGACGGTTCCTTCCCATCCTCTACCGTCCGCAACGAAGCTG
GCCATGTCACGCTTCAAGGATGGCTTGCACAATGGAGTATGACTACTTTT
ACGTCGCCTAAAACAACATTGGAGTATCTGGCCTACCTGGGATTCGAGTC
GTCCGACCGAAGCAATCCTTCTACAACAGCAGCCCTTAAAGTTACGCGAC
CGCGAAAGCGACGCAAGCGTCCTGGCCGTGTGGGCCGCAATGTTGTTCTT
GGTCATGTCCTTGGAGCTGCAGGCTCAGGTAAATCTGCACTCCTCGACGC
TTTCCTGTCCCGCGGATTCAGTACTACTTATCGTCCCACTATCCAGCCCC
GAACTGCTGTGAACACGGTTGAGCTTCCGGGAGGGAAACAGTGCTACCTC
ATCCTCGATGAGCTCGGGGAACTGGAGCCTGCCCTCCTCGAGAATCAGGT
AAAACTGCTGGACCAGTGCGATGTCATCGTGTACACGTATGACTCGTCAG
ATCCCGATTCCTTTGCATATATCCCAGCGCTGCGCGCCAAATATCCTCAC
TTGGAGGAGCTGCCTAGTGTGTTCATTGCTCTCAAGGCAGACTTGGATCG
GACTACTCAGCGGGCTGAATATCAACCCCACGAATACACTGCTATGTTGA
ATATGCCGAGCCCTCCCCTTCATGTCAGTGCCACTTGGAGTTCCATCCAG
GAGGTGTTTGTCCACATTGCAGAAGCGGCCATGGAGCCAAGTACGGCCTT
CCCGCGGAGTGAGGAAGACGTGGAAGGCAAATGGATGGCATGGGGAATTG
CTCTTGGAGCAGTGGTTTGTGCCGGAGCGGCGGCCGTCATGATTTGGCGG
AGAGTTAGTGGAAGCGGAGTGTGATGGGGGAGGGACTCTCTTGTATTTCT
GTGGAGTCAAATAGATACCCTTGAGTCTGTATGTTGGGACATTAGTGTGT
GTTTGCCGGCAAATCGCCAGTTAACCGACTAGTAGTAAGAAGTAAACTAT
GCATAATGAACGGCCTAATTCCGGCTGGTGATCC
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Coding sequence (CDS) from alignment at ch2:3265303..3267736+

>KJC3_002680-T1 ID=KJC3_002680-T1|Name=KJC3_002680-T1|organism=Aspergillus niger KJC3|type=CDS|length=3804bp|location=Sequence derived from alignment at ch2:3265303..3267736+ (Aspergillus niger KJC3)
ATGGCTACAGTGCGAATCTGCGTTTGTGGTGATGAGGGCACTGGCAAGTC
CAGTCTCATCACCTCCCTTGTGAAGGGGGTGTTCGTCACAAACAAAATCC
AGCCTATCCTACCTCAAATTACCATCCCTCCCACGATCGGTACCCCCGAG
AATGTCACGACAACGACGGTGGTGGACACCTCCGCTCTTCCGCAGGAGCG
CAATAATCTGGCCAGAGAGATCCGGAAGTCCAATGTAATCCTACTCGTAT
ATTCGGACCATTACAGCTATGAGAGAGTCGCTCTATTCTGGTTACCATAC
TTTCGTTCTCTAGGGGTCAATGTCCCCGTGGTACTATGTGCGAACAAGTC
CGATCTCGCCGCAGATCATACCGAGGCCCAGGTCATTGAGGAGGAAATGC
TACCATTGATGGCGGAGTTCAAAGAAATCGACTCTTGCATCCGCACCAGC
GCTCGTGAACATCGAAATGTCAACGAAGCCTTCTTTCTCTGTCAGAAAGC
AGTGACTCATCCGATTGCGCCGTTGTTTGACTCCAAGGAATCCTCCCTAA
AGCCGGCAGCCATTGCAGCGTTGCAGCGAATATTCTACCTCTGTGATAAG
GATAGGGATGGTTATCTGTCTGATAAAGAGATCAAGGATTTTCAAATGAG
ATGCTTTGAGAAGCCATTGAGTGAGGAGGATTTGGTTCACATTAAGGAGA
CCATTCAGAGAACGCACCCTCATTCAGTGACACCCTCAGGCATCGATTGC
CGCGGATTTTTGCAGCTGAACAAAATGTATGCGGAAAAGGGTCGACATGA
GACTGTTTGGATTATCCTACGAGCCTTCCAATACACAGACAACCTATCGC
TACAGGAGAACTTCCTTCACCCGAGGTTTGACGTACCCCCTTATGCGTCG
GCTGAGCTTTCGCCAGAGGGATATCGATTCTTTGTGAACCTCTTCCTGCT
TTCAGACAAGGATAACGATGGAGGCCTGAACGATGCTGAGCTAGCATCGT
TGTTCGCGCCCACCCCGGGATTGCCTGCTTCATGGGCGGACGGTTCCTTC
CCATCCTCTACCGTCCGCAACGAAGCTGGCCATGTCACGCTTCAAGGATG
GCTTGCACAATGGAGTATGACTACTTTTACGTCGCCTAAAACAACATTGG
AGTATCTGGCCTACCTGGGATTCGAGTCGTCCGACCGAAGCAATCCTTCT
ACAACAGCAGCCCTTAAAGTTACGCGACCGCGAAAGCGACGCAAGCGTCC
TGGCCGTGTGGGCCGCAATGTTGTTCTTGGTCATGTCCTTGGAGCTGCAG
GCTCAGGTAAATCTGCACTCCTCGACGCTTTCCTGTCCCGCGGATTCAGT
ACTACTTATCGTCCCACTATCCAGCCCCGAACTGCTGTGAACACGGTTGA
GCTTCCGGGAGGGAAACAGTGCTACCTCATCCTCGATGAGCTCGGGGAAC
TGGAGCCTGCCCTCCTCGAGAATCAGGTAAAACTGCTGGACCAGTGCGAT
GTCATCGTGTACACGTATGACTCGTCAGATCCCGATTCCTTTGCATATAT
CCCAGCGCTGCGCGCCAAATATCCTCACTTGGAGGAGCTGCCTAGTGTGT
TCATTGCTCTCAAGGCAGACTTGGATCGGACTACTCAGCGGGCTGAATAT
CAACCCCACGAATACACTGCTATGTTGAATATGCCGAGCCCTCCCCTTCA
TGTCAGTGCCACTTGGAGTTCCATCCAGGAGGTGTTTGTCCACATTGCAG
AAGCGGCCATGGAGCCAAGTACGGCCTTCCCGCGGAGTGAGGAAGACGTG
GAAGGCAAATGGATGGCATGGGGAATTGCTCTTGGAGCAGTGGTTTGTGC
CGGAGCGGCGGCCGTCATGATTTGGCGGAGAGTTAGTGGAAGCGGAGTGT
GAATGGCTACAGTGCGAATCTGCGTTTGTGGTGATGAGGGCACTGGCAAG
TCCAGTCTCATCACCTCCCTTGTGAAGGGGGTGTTCGTCACAAACAAAAT
CCAGCCTATCCTACCTCAAATTACCATCCCTCCCACGATCGGTACCCCCG
AGAATGTCACGACAACGACGGTGGTGGACACCTCCGCTCTTCCGCAGGAG
CGCAATAATCTGGCCAGAGAGATCCGGAAGTCCAATGTAATCCTACTCGT
ATATTCGGACCATTACAGCTATGAGAGAGTCGCTCTATTCTGGTTACCAT
ACTTTCGTTCTCTAGGGGTCAATGTCCCCGTGGTACTATGTGCGAACAAG
TCCGATCTCGCCGCAGATCATACCGAGGCCCAGGTCATTGAGGAGGAAAT
GCTACCATTGATGGCGGAGTTCAAAGAAATCGACTCTTGCATCCGCACCA
GCGCTCGTGAACATCGAAATGTCAACGAAGCCTTCTTTCTCTGTCAGAAA
GCAGTGACTCATCCGATTGCGCCGTTGTTTGACTCCAAGGAATCCTCCCT
AAAGCCGGCAGCCATTGCAGCGTTGCAGCGAATATTCTACCTCTGTGATA
AGGATAGGGATGGTTATCTGTCTGATAAAGAGATCAAGGATTTTCAAATG
AGATGCTTTGAGAAGCCATTGAGTGAGGAGGATTTGGTTCACATTAAGGA
GACCATTCAGAGAACGCACCCTCATTCAGTGACACCCTCAGGCATCGATT
GCCGCGGATTTTTGCAGCTGAACAAAATGTATGCGGAAAAGGGTCGACAT
GAGACTGTTTGGATTATCCTACGAGCCTTCCAATACACAGACAACCTATC
GCTACAGGAGAACTTCCTTCACCCGAGGTTTGACGTACCCCCTTATGCGT
CGGCTGAGCTTTCGCCAGAGGGATATCGATTCTTTGTGAACCTCTTCCTG
CTTTCAGACAAGGATAACGATGGAGGCCTGAACGATGCTGAGCTAGCATC
GTTGTTCGCGCCCACCCCGGGATTGCCTGCTTCATGGGCGGACGGTTCCT
TCCCATCCTCTACCGTCCGCAACGAAGCTGGCCATGTCACGCTTCAAGGA
TGGCTTGCACAATGGAGTATGACTACTTTTACGTCGCCTAAAACAACATT
GGAGTATCTGGCCTACCTGGGATTCGAGTCGTCCGACCGAAGCAATCCTT
CTACAACAGCAGCCCTTAAAGTTACGCGACCGCGAAAGCGACGCAAGCGT
CCTGGCCGTGTGGGCCGCAATGTTGTTCTTGGTCATGTCCTTGGAGCTGC
AGGCTCAGGTAAATCTGCACTCCTCGACGCTTTCCTGTCCCGCGGATTCA
GTACTACTTATCGTCCCACTATCCAGCCCCGAACTGCTGTGAACACGGTT
GAGCTTCCGGGAGGGAAACAGTGCTACCTCATCCTCGATGAGCTCGGGGA
ACTGGAGCCTGCCCTCCTCGAGAATCAGGTAAAACTGCTGGACCAGTGCG
ATGTCATCGTGTACACGTATGACTCGTCAGATCCCGATTCCTTTGCATAT
ATCCCAGCGCTGCGCGCCAAATATCCTCACTTGGAGGAGCTGCCTAGTGT
GTTCATTGCTCTCAAGGCAGACTTGGATCGGACTACTCAGCGGGCTGAAT
ATCAACCCCACGAATACACTGCTATGTTGAATATGCCGAGCCCTCCCCTT
CATGTCAGTGCCACTTGGAGTTCCATCCAGGAGGTGTTTGTCCACATTGC
AGAAGCGGCCATGGAGCCAAGTACGGCCTTCCCGCGGAGTGAGGAAGACG
TGGAAGGCAAATGGATGGCATGGGGAATTGCTCTTGGAGCAGTGGTTTGT
GCCGGAGCGGCGGCCGTCATGATTTGGCGGAGAGTTAGTGGAAGCGGAGT
GTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0031307integral component of mitochondrial outer membrane
Vocabulary: Biological Process
TermDefinition
GO:0007005mitochondrion organization
Vocabulary: Molecular Function
TermDefinition
GO:0005509calcium ion binding
GO:0005525GTP binding
GO:0003924GTPase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
GEM1KJC3_002680Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002680-T1KJC3_002680-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002680-T1.utr5p1KJC3_002680-T1.utr5p1Aspergillus niger KJC3five_prime_UTR
KJC3_002680-T1.utr5p2KJC3_002680-T1.utr5p2Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002680-T1.exon1KJC3_002680-T1.exon1Aspergillus niger KJC3exon
KJC3_002680-T1.exon2KJC3_002680-T1.exon2Aspergillus niger KJC3exon
KJC3_002680-T1.exon3KJC3_002680-T1.exon3Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002680-T1.cdsKJC3_002680-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002680-T1.utr3p1KJC3_002680-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG0926133I
DBxrefInterPro:IPR011992
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR002048
DBxrefInterPro:IPR020860
DBxrefInterPro:IPR018247
DBxrefInterPro:IPR013566
DBxrefInterPro:IPR021181
DBxrefInterPro:IPR001806
DBxrefInterPro:IPR013567
DBxrefPFAM:PF08477
DBxrefPFAM:PF00071
DBxrefPFAM:PF08356
DBxrefPFAM:PF08355
ProductERMES complex Ca(2 )-binding regulatory GTPase gem1
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:3265303..3267736 +
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