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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:3314492..3317006+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_002693-T2 ID=KJC3_002693-T2|Name=KJC3_002693-T2|organism=Aspergillus niger KJC3|type=mRNA|length=2515bp|location=Sequence derived from alignment at ch2:3314492..3317006+ (Aspergillus niger KJC3)
CCCTAGATTCCTGTTTCTTCCCCTGTCCTTTCCACTGATCTTCTACTCTC
ACTCCTCTGATATATAGGCGTAATCGCCGTTTAATTATTCCTCTTTCGGT
GTCTTCCGAGTCCCTCATCTTGACAGGGTTACACTTGTTTTTTAAAGAGA
CAATTGCCCTTTGTATACACACAGAGTGGGCCAATTTCTCCTCTTTTGCG
ACAATCCAGGGCTGTGAACCTAAATTGACCTGCAAAAGCAGTCAGCATGG
AACCAAAACCGGACGTTGAGTCCAAGGTCGATGTTCCTCCGGAAAAGGCC
CCCGCTTCTCTCGACGCAATTCCTTTGGAGGAAACTGCGGTAGGCAAGAG
CCGTTGGGAGCGCAGTTGGCCCACAATTGCTTGCGGCGCTGGTCTCTTCT
CTGATGGCTACCTCAATGGGGTTCGTACACTCAAAATAGACTGGATTTGT
GGCATTTGTTGGTCTTGCTAATCTGGGTTGTTTACAGATCATTGGACCTG
TAAATACGATCCTGAAGAGGCTCTACCCTGATGAATACGCCAACTCGCCC
GCCAGCCAGAATGTATCTTCGATTACTTTCGCAGGTACTGTGGTCGGTAT
GCTTATCTTTGGATACACAAGTGACCACTGGTCGAGAAAATGGTCTTTAA
TGATCTCTACGATCATTTTGTTCCTCTTTGCCGCTTTGTGTGCTGGATCC
TATGGATACCATAACAGCCATTATGGCTTATTTGCTGCCCTTACCGCATA
CCGTTTCTTCCTAGGAATTGGAATTGGCGGCGAGTACCCTGCAGGGTCTG
TCGCAGCCGCGGAGAACACTGGTGAACTCAAGCAAGGCCATCGCAACCGA
TGGTTCGTGATGTTCACCAATTTCCAGATCGATTTTGCCTATGTTGTCTC
CGCCTTGGTTTCGATGATTTTGGTTTTGATCTTCACCGAAAACCATCTGC
GTGCGGTCTGGCGTATCGGATTGGGTCTTGGTGTCATTCCACCTCTTAGT
CTGATCTATCTCCGGTTGAAGTTGGAGGAGCCCGAGGAGTTTAACCGCGA
GCGCATGCACAAGTTCCCTCTTTGGTTGATTATCAAGTAAGCTGCCTGGC
TATTATCACTTATTGTATTCCACGACTAATCGCACATTCATAGGTTCTAT
TGGAAGCGTCTGGTTTGTGTGCCCCGTTCTAGCCAGTGGGCAGAGCATTA
CTGACCATGGACAGTTTATATGCTCATTGATCTGGTTCCTCTATGACTTT
TCTTCTTATTCCTTCAGCATCTACTCGTCTGACTGGATCGCAATCATCTT
GGGGGACAGTGCTCCACTCTGGAAGAGCTTCGGTTGGACTACACTGACAT
ATTCCTTCTACATCCCCGGATCTTTTCTAGGAGCATTGGCGAGTGATTGG
TTGGGGCCCCGCAATACCCTGGCCCTCGGTGTCTTGCTGCAAGGCATTGT
TGGTTTTATCATGTCCGGCTGCTATGAGTATCTCTCAACGCCCAAGAATG
TCGCAGCATTCGTCGTGGTTTTCGGGTAAGCCCTGGCCTTGCATCATAAT
GATGTCTCATCTGCTAACTTATGAACCTAGCATTTTCTCGAGTCTTGGTG
AGTTTGGCCCGGGCGACAACATTGGATTGTGCTGTGCCAAGAGCAGTGCA
ACCGCTGTACGGGGCCAGTTCTACGCCATCGCTGCTGCTGCTGGAAAGAT
AGGCGCGTTTGTTGGGACATATGTGATCCCGATCATTCAAGACAACGCGC
CTAACAAGGTCCGGTCCGGCCAGGACCCCTTCTTCGTCTCCAGTTCACTC
TGCATTTTTAGTGCTGCTTTGGCCTTTTTCCTCCTGCCAAACATCGGACA
GGTATGCCATACTTTTGGGTCCGTCCAGGCGAGAGAATAGGCTAATAGTC
TCATACAGGACACCATCACTTATGAGGACGCCAAATTCCGGGCCTATCTT
GAGGCCCATGGTTACGATACTTCTGCCATGGGCAACCGAGAGGAGCGGTA
ATCGATTTCCTCCTGCAACCCGCGCGCCTTACGGACCTGCTAAAGCAACG
CATCTGAACCGCTTACCCGGTCAACGCCCCAGCCTAACAGGCGTCAACCC
TCCCGTACCCCAAGCGACATCCAGCAGACGAACGGCCCATGCAACATCCA
TTAAGAAAGCCCAAGCAGCGAACCGGCGATGATCGACGATCGAAGTTGGA
GTTAAGATGCCCAAGCGACCCCAGAAGAGAATACGCCCAGAAGCGCAATT
TTGGTAACGAACAATTTGCCCGATCGGAGCCCTGGAAAGGATGCTCAGGG
TCTTAAGATAAGAGAGTATGGCTAATGACTCGATGACTATGTGCCATTGA
TGTAATGTATAGAAATACTATTATTATGCTTCATGTTATTTCGTCGAAGG
AAAAGAAGGGGAAAATTAATAATAAAAAAAGATGATTGTTGAAGACCAGC
TGGACCCGTAGTTTGCATGGCGGGGAGAGTGGATTAGGGAGGATCTTGTG
ATTGACAGCTTGGAT back to topCoding sequence (CDS) from alignment at ch2:3314492..3317006+ >KJC3_002693-T2 ID=KJC3_002693-T2|Name=KJC3_002693-T2|organism=Aspergillus niger KJC3|type=CDS|length=7065bp|location=Sequence derived from alignment at ch2:3314492..3317006+ (Aspergillus niger KJC3)
ATGGAACCAAAACCGGACGTTGAGTCCAAGGTCGATGTTCCTCCGGAAAA
GGCCCCCGCTTCTCTCGACGCAATTCCTTTGGAGGAAACTGCGGTAGGCA
AGAGCCGTTGGGAGCGCAGTTGGCCCACAATTGCTTGCGGCGCTGGTCTC
TTCTCTGATGGCTACCTCAATGGGATCATTGGACCTGTAAATACGATCCT
GAAGAGGCTCTACCCTGATGAATACGCCAACTCGCCCGCCAGCCAGAATG
TATCTTCGATTACTTTCGCAGGTACTGTGGTCGGTATGCTTATCTTTGGA
TACACAAGTGACCACTGGTCGAGAAAATGGTCTTTAATGATCTCTACGAT
CATTTTGTTCCTCTTTGCCGCTTTGTGTGCTGGATCCTATGGATACCATA
ACAGCCATTATGGCTTATTTGCTGCCCTTACCGCATACCGTTTCTTCCTA
GGAATTGGAATTGGCGGCGAGTACCCTGCAGGGTCTGTCGCAGCCGCGGA
GAACACTGGTGAACTCAAGCAAGGCCATCGCAACCGATGGTTCGTGATGT
TCACCAATTTCCAGATCGATTTTGCCTATGTTGTCTCCGCCTTGGTTTCG
ATGATTTTGGTTTTGATCTTCACCGAAAACCATCTGCGTGCGGTCTGGCG
TATCGGATTGGGTCTTGGTGTCATTCCACCTCTTAGTCTGATCTATCTCC
GGTTGAAGTTGGAGGAGCCCGAGGAGTTTAACCGCGAGCGCATGCACAAG
TTCCCTCTTTGGTTGATTATCAAGTTCTATTGGAAGCGTCTGTTTATATG
CTCATTGATCTGGTTCCTCTATGACTTTTCTTCTTATTCCTTCAGCATCT
ACTCGTCTGACTGGATCGCAATCATCTTGGGGGACAGTGCTCCACTCTGG
AAGAGCTTCGGTTGGACTACACTGACATATTCCTTCTACATCCCCGGATC
TTTTCTAGGAGCATTGGCGAGTGATTGGTTGGGGCCCCGCAATACCCTGG
CCCTCGGTGTCTTGCTGCAAGGCATTGTTGGTTTTATCATGTCCGGCTGC
TATGAGTATCTCTCAACGCCCAAGAATGTCGCAGCATTCGTCGTGGTTTT
CGGCATTTTCTCGAGTCTTGGTGAGTTTGGCCCGGGCGACAACATTGGAT
TGTGCTGTGCCAAGAGCAGTGCAACCGCTGTACGGGGCCAGTTCTACGCC
ATCGCTGCTGCTGCTGGAAAGATAGGCGCGTTTGTTGGGACATATGTGAT
CCCGATCATTCAAGACAACGCGCCTAACAAGGTCCGGTCCGGCCAGGACC
CCTTCTTCGTCTCCAGTTCACTCTGCATTTTTAGTGCTGCTTTGGCCTTT
TTCCTCCTGCCAAACATCGGACAGGTATGCCATACTTTTGGGTCCGTCCA
GGCGAGAGAATAGATGGAACCAAAACCGGACGTTGAGTCCAAGGTCGATG
TTCCTCCGGAAAAGGCCCCCGCTTCTCTCGACGCAATTCCTTTGGAGGAA
ACTGCGGTAGGCAAGAGCCGTTGGGAGCGCAGTTGGCCCACAATTGCTTG
CGGCGCTGGTCTCTTCTCTGATGGCTACCTCAATGGGATCATTGGACCTG
TAAATACGATCCTGAAGAGGCTCTACCCTGATGAATACGCCAACTCGCCC
GCCAGCCAGAATGTATCTTCGATTACTTTCGCAGGTACTGTGGTCGGTAT
GCTTATCTTTGGATACACAAGTGACCACTGGTCGAGAAAATGGTCTTTAA
TGATCTCTACGATCATTTTGTTCCTCTTTGCCGCTTTGTGTGCTGGATCC
TATGGATACCATAACAGCCATTATGGCTTATTTGCTGCCCTTACCGCATA
CCGTTTCTTCCTAGGAATTGGAATTGGCGGCGAGTACCCTGCAGGGTCTG
TCGCAGCCGCGGAGAACACTGGTGAACTCAAGCAAGGCCATCGCAACCGA
TGGTTCGTGATGTTCACCAATTTCCAGATCGATTTTGCCTATGTTGTCTC
CGCCTTGGTTTCGATGATTTTGGTTTTGATCTTCACCGAAAACCATCTGC
GTGCGGTCTGGCGTATCGGATTGGGTCTTGGTGTCATTCCACCTCTTAGT
CTGATCTATCTCCGGTTGAAGTTGGAGGAGCCCGAGGAGTTTAACCGCGA
GCGCATGCACAAGTTCCCTCTTTGGTTGATTATCAAGTTCTATTGGAAGC
GTCTGTTTATATGCTCATTGATCTGGTTCCTCTATGACTTTTCTTCTTAT
TCCTTCAGCATCTACTCGTCTGACTGGATCGCAATCATCTTGGGGGACAG
TGCTCCACTCTGGAAGAGCTTCGGTTGGACTACACTGACATATTCCTTCT
ACATCCCCGGATCTTTTCTAGGAGCATTGGCGAGTGATTGGTTGGGGCCC
CGCAATACCCTGGCCCTCGGTGTCTTGCTGCAAGGCATTGTTGGTTTTAT
CATGTCCGGCTGCTATGAGTATCTCTCAACGCCCAAGAATGTCGCAGCAT
TCGTCGTGGTTTTCGGCATTTTCTCGAGTCTTGGTGAGTTTGGCCCGGGC
GACAACATTGGATTGTGCTGTGCCAAGAGCAGTGCAACCGCTGTACGGGG
CCAGTTCTACGCCATCGCTGCTGCTGCTGGAAAGATAGGCGCGTTTGTTG
GGACATATGTGATCCCGATCATTCAAGACAACGCGCCTAACAAGGTCCGG
TCCGGCCAGGACCCCTTCTTCGTCTCCAGTTCACTCTGCATTTTTAGTGC
TGCTTTGGCCTTTTTCCTCCTGCCAAACATCGGACAGGTATGCCATACTT
TTGGGTCCGTCCAGGCGAGAGAATAGATGGAACCAAAACCGGACGTTGAG
TCCAAGGTCGATGTTCCTCCGGAAAAGGCCCCCGCTTCTCTCGACGCAAT
TCCTTTGGAGGAAACTGCGGTAGGCAAGAGCCGTTGGGAGCGCAGTTGGC
CCACAATTGCTTGCGGCGCTGGTCTCTTCTCTGATGGCTACCTCAATGGG
ATCATTGGACCTGTAAATACGATCCTGAAGAGGCTCTACCCTGATGAATA
CGCCAACTCGCCCGCCAGCCAGAATGTATCTTCGATTACTTTCGCAGGTA
CTGTGGTCGGTATGCTTATCTTTGGATACACAAGTGACCACTGGTCGAGA
AAATGGTCTTTAATGATCTCTACGATCATTTTGTTCCTCTTTGCCGCTTT
GTGTGCTGGATCCTATGGATACCATAACAGCCATTATGGCTTATTTGCTG
CCCTTACCGCATACCGTTTCTTCCTAGGAATTGGAATTGGCGGCGAGTAC
CCTGCAGGGTCTGTCGCAGCCGCGGAGAACACTGGTGAACTCAAGCAAGG
CCATCGCAACCGATGGTTCGTGATGTTCACCAATTTCCAGATCGATTTTG
CCTATGTTGTCTCCGCCTTGGTTTCGATGATTTTGGTTTTGATCTTCACC
GAAAACCATCTGCGTGCGGTCTGGCGTATCGGATTGGGTCTTGGTGTCAT
TCCACCTCTTAGTCTGATCTATCTCCGGTTGAAGTTGGAGGAGCCCGAGG
AGTTTAACCGCGAGCGCATGCACAAGTTCCCTCTTTGGTTGATTATCAAG
TTCTATTGGAAGCGTCTGTTTATATGCTCATTGATCTGGTTCCTCTATGA
CTTTTCTTCTTATTCCTTCAGCATCTACTCGTCTGACTGGATCGCAATCA
TCTTGGGGGACAGTGCTCCACTCTGGAAGAGCTTCGGTTGGACTACACTG
ACATATTCCTTCTACATCCCCGGATCTTTTCTAGGAGCATTGGCGAGTGA
TTGGTTGGGGCCCCGCAATACCCTGGCCCTCGGTGTCTTGCTGCAAGGCA
TTGTTGGTTTTATCATGTCCGGCTGCTATGAGTATCTCTCAACGCCCAAG
AATGTCGCAGCATTCGTCGTGGTTTTCGGCATTTTCTCGAGTCTTGGTGA
GTTTGGCCCGGGCGACAACATTGGATTGTGCTGTGCCAAGAGCAGTGCAA
CCGCTGTACGGGGCCAGTTCTACGCCATCGCTGCTGCTGCTGGAAAGATA
GGCGCGTTTGTTGGGACATATGTGATCCCGATCATTCAAGACAACGCGCC
TAACAAGGTCCGGTCCGGCCAGGACCCCTTCTTCGTCTCCAGTTCACTCT
GCATTTTTAGTGCTGCTTTGGCCTTTTTCCTCCTGCCAAACATCGGACAG
GTATGCCATACTTTTGGGTCCGTCCAGGCGAGAGAATAGATGGAACCAAA
ACCGGACGTTGAGTCCAAGGTCGATGTTCCTCCGGAAAAGGCCCCCGCTT
CTCTCGACGCAATTCCTTTGGAGGAAACTGCGGTAGGCAAGAGCCGTTGG
GAGCGCAGTTGGCCCACAATTGCTTGCGGCGCTGGTCTCTTCTCTGATGG
CTACCTCAATGGGATCATTGGACCTGTAAATACGATCCTGAAGAGGCTCT
ACCCTGATGAATACGCCAACTCGCCCGCCAGCCAGAATGTATCTTCGATT
ACTTTCGCAGGTACTGTGGTCGGTATGCTTATCTTTGGATACACAAGTGA
CCACTGGTCGAGAAAATGGTCTTTAATGATCTCTACGATCATTTTGTTCC
TCTTTGCCGCTTTGTGTGCTGGATCCTATGGATACCATAACAGCCATTAT
GGCTTATTTGCTGCCCTTACCGCATACCGTTTCTTCCTAGGAATTGGAAT
TGGCGGCGAGTACCCTGCAGGGTCTGTCGCAGCCGCGGAGAACACTGGTG
AACTCAAGCAAGGCCATCGCAACCGATGGTTCGTGATGTTCACCAATTTC
CAGATCGATTTTGCCTATGTTGTCTCCGCCTTGGTTTCGATGATTTTGGT
TTTGATCTTCACCGAAAACCATCTGCGTGCGGTCTGGCGTATCGGATTGG
GTCTTGGTGTCATTCCACCTCTTAGTCTGATCTATCTCCGGTTGAAGTTG
GAGGAGCCCGAGGAGTTTAACCGCGAGCGCATGCACAAGTTCCCTCTTTG
GTTGATTATCAAGTTCTATTGGAAGCGTCTGTTTATATGCTCATTGATCT
GGTTCCTCTATGACTTTTCTTCTTATTCCTTCAGCATCTACTCGTCTGAC
TGGATCGCAATCATCTTGGGGGACAGTGCTCCACTCTGGAAGAGCTTCGG
TTGGACTACACTGACATATTCCTTCTACATCCCCGGATCTTTTCTAGGAG
CATTGGCGAGTGATTGGTTGGGGCCCCGCAATACCCTGGCCCTCGGTGTC
TTGCTGCAAGGCATTGTTGGTTTTATCATGTCCGGCTGCTATGAGTATCT
CTCAACGCCCAAGAATGTCGCAGCATTCGTCGTGGTTTTCGGCATTTTCT
CGAGTCTTGGTGAGTTTGGCCCGGGCGACAACATTGGATTGTGCTGTGCC
AAGAGCAGTGCAACCGCTGTACGGGGCCAGTTCTACGCCATCGCTGCTGC
TGCTGGAAAGATAGGCGCGTTTGTTGGGACATATGTGATCCCGATCATTC
AAGACAACGCGCCTAACAAGGTCCGGTCCGGCCAGGACCCCTTCTTCGTC
TCCAGTTCACTCTGCATTTTTAGTGCTGCTTTGGCCTTTTTCCTCCTGCC
AAACATCGGACAGGTATGCCATACTTTTGGGTCCGTCCAGGCGAGAGAAT
AGATGGAACCAAAACCGGACGTTGAGTCCAAGGTCGATGTTCCTCCGGAA
AAGGCCCCCGCTTCTCTCGACGCAATTCCTTTGGAGGAAACTGCGGTAGG
CAAGAGCCGTTGGGAGCGCAGTTGGCCCACAATTGCTTGCGGCGCTGGTC
TCTTCTCTGATGGCTACCTCAATGGGATCATTGGACCTGTAAATACGATC
CTGAAGAGGCTCTACCCTGATGAATACGCCAACTCGCCCGCCAGCCAGAA
TGTATCTTCGATTACTTTCGCAGGTACTGTGGTCGGTATGCTTATCTTTG
GATACACAAGTGACCACTGGTCGAGAAAATGGTCTTTAATGATCTCTACG
ATCATTTTGTTCCTCTTTGCCGCTTTGTGTGCTGGATCCTATGGATACCA
TAACAGCCATTATGGCTTATTTGCTGCCCTTACCGCATACCGTTTCTTCC
TAGGAATTGGAATTGGCGGCGAGTACCCTGCAGGGTCTGTCGCAGCCGCG
GAGAACACTGGTGAACTCAAGCAAGGCCATCGCAACCGATGGTTCGTGAT
GTTCACCAATTTCCAGATCGATTTTGCCTATGTTGTCTCCGCCTTGGTTT
CGATGATTTTGGTTTTGATCTTCACCGAAAACCATCTGCGTGCGGTCTGG
CGTATCGGATTGGGTCTTGGTGTCATTCCACCTCTTAGTCTGATCTATCT
CCGGTTGAAGTTGGAGGAGCCCGAGGAGTTTAACCGCGAGCGCATGCACA
AGTTCCCTCTTTGGTTGATTATCAAGTTCTATTGGAAGCGTCTGTTTATA
TGCTCATTGATCTGGTTCCTCTATGACTTTTCTTCTTATTCCTTCAGCAT
CTACTCGTCTGACTGGATCGCAATCATCTTGGGGGACAGTGCTCCACTCT
GGAAGAGCTTCGGTTGGACTACACTGACATATTCCTTCTACATCCCCGGA
TCTTTTCTAGGAGCATTGGCGAGTGATTGGTTGGGGCCCCGCAATACCCT
GGCCCTCGGTGTCTTGCTGCAAGGCATTGTTGGTTTTATCATGTCCGGCT
GCTATGAGTATCTCTCAACGCCCAAGAATGTCGCAGCATTCGTCGTGGTT
TTCGGCATTTTCTCGAGTCTTGGTGAGTTTGGCCCGGGCGACAACATTGG
ATTGTGCTGTGCCAAGAGCAGTGCAACCGCTGTACGGGGCCAGTTCTACG
CCATCGCTGCTGCTGCTGGAAAGATAGGCGCGTTTGTTGGGACATATGTG
ATCCCGATCATTCAAGACAACGCGCCTAACAAGGTCCGGTCCGGCCAGGA
CCCCTTCTTCGTCTCCAGTTCACTCTGCATTTTTAGTGCTGCTTTGGCCT
TTTTCCTCCTGCCAAACATCGGACAGGTATGCCATACTTTTGGGTCCGTC
CAGGCGAGAGAATAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0022857 | transmembrane transporter activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002693-T2.utr5p1 | KJC3_002693-T2.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002693-T2.utr3p1 | KJC3_002693-T2.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036259 |
| DBxref | InterPro:IPR020846 |
| DBxref | InterPro:IPR005828 |
| DBxref | PFAM:PF07690 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:3314492..3317006 + |
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