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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:3371607..3372733- Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_002715-T1 ID=KJC3_002715-T1|Name=KJC3_002715-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1127bp|location=Sequence derived from alignment at ch2:3371607..3372733- (Aspergillus niger KJC3)
CATTCGGTCCATGAGGATATCTTAACATCTATCGCGCTGCAACCATTCCG
CAGCGGATCGGCATTTCAATTCCTTATCGTCGGCTTGGATTCTCGATCTC
GTTCCACGCCCGTTAATCCCCACACTCACACCCGCCGCGATTGGGAGAAC
TACCATCCCAGCGCATCGCCAACATGCGTTCCAGAGCATCAGTCAAGCCC
TCCCAATACCCCCCGATTCCATTCCATACCATTCGCTTTTTCGGCCTGAT
TTCCACTTTCATTGTGGGCATTATCTTGGCCGTATTCGTCAACCAACTGC
ATAGCAACAACTACAAGCTCCCGTGGGCTTTCCTAATCGTAAGGCTACCA
TATTTACCTCCACCCCCCCCCCCCAATCCATGTTATACACTCCACTAACA
CCCCATCCCAACTCATCAGCTCCTCATAGCCACCGTCTTCTCCCTCCTAA
ACTTCATCCTCACCACCATAACCCACTGCTGCTATGGCCTCTCCCCGCGC
CTCAACCTCGTCACCAACAGCATTGTCCTCGTCCTCTGGCTCATCGCCCT
CGGTCTCCTAAGCTGGAGCATGTCCCACACCATCCTAACGACCTGCAACA
CAACCTACTGGGGCACCTCCACCGGTATCACCGTCTGCAGGATCTACAAG
GCCCTCTTCACCTTCACCATTGTGGCCGCGACAGCCCACATCGCCGCCGC
CGCTCTGGACATTATCGTTTACCGTCGCCAGACCCGCCTCGGTGAATACG
ATCCTATGGCCAGCAGTACAGCTCTCAACGACTACAAGATGCACAACCGA
GACAGCAGCATCATGTCCGGCGGCGTTGGCCCTTACCCGCCCGATGAGGC
CGATCACCCCTATTACGCCAATCAACCGCATCAAGAACCCCTGTACCAGC
ATGCCCCGGAGCCGTTGTACCATCCCAGCCAGCGTATGCCGCCTCCTCCT
GCGTATGGGGCTGGCTCGTTGGAGCAGCACCATGCCGATGAAGCGGAGGA
GTACTCCGATGCTGCGCCGGTGCAGGGACGTCGGAAGCCAAGGGTGAGGT
TTAGTGCTTACGGAGGTACTGCGGGTTATAGTCAGCCGTCGGAGCAGACG
AGTTATGACCCAGCTGCGTATCGGTGA back to topCoding sequence (CDS) from alignment at ch2:3371607..3372733- >KJC3_002715-T1 ID=KJC3_002715-T1|Name=KJC3_002715-T1|organism=Aspergillus niger KJC3|type=CDS|length=1746bp|location=Sequence derived from alignment at ch2:3371607..3372733- (Aspergillus niger KJC3)
CTCCTCATAGCCACCGTCTTCTCCCTCCTAAACTTCATCCTCACCACCAT
AACCCACTGCTGCTATGGCCTCTCCCCGCGCCTCAACCTCGTCACCAACA
GCATTGTCCTCGTCCTCTGGCTCATCGCCCTCGGTCTCCTAAGCTGGAGC
ATGTCCCACACCATCCTAACGACCTGCAACACAACCTACTGGGGCACCTC
CACCGGTATCACCGTCTGCAGGATCTACAAGGCCCTCTTCACCTTCACCA
TTGTGGCCGCGACAGCCCACATCGCCGCCGCCGCTCTGGACATTATCGTT
TACCGTCGCCAGACCCGCCTCGGTGAATACGATCCTATGGCCAGCAGTAC
AGCTCTCAACGACTACAAGATGCACAACCGAGACAGCAGCATCATGTCCG
GCGGCGTTGGCCCTTACCCGCCCGATGAGGCCGATCACCCCTATTACGCC
AATCAACCGCATCAAGAACCCCTGTACCAGCATGCCCCGGAGCCGTTGTA
CCATCCCAGCCAGCGTATGCCGCCTCCTCCTGCGTATGGGGCTGGCTCGT
TGGAGCAGCACCATGCCGATGAAGCGGAGGAGTACTCCGATGCTGCGCCG
GTGCAGGGACGTCGGAAGCCAAGGGTGAGGTTTAGTGCTTACGGAGGTAC
TGCGGGTTATAGTCAGCCGTCGGAGCAGACGAGTTATGACCCAGCTGCGT
ATCGGTGAATGCGTTCCAGAGCATCAGTCAAGCCCTCCCAATACCCCCCG
ATTCCATTCCATACCATTCGCTTTTTCGGCCTGATTTCCACTTTCATTGT
GGGCATTATCTTGGCCGTATTCGTCAACCAACTGCATAGCAACAACTACA
AGCTCCCGTGGGCTTTCCTAATCCTCCTCATAGCCACCGTCTTCTCCCTC
CTAAACTTCATCCTCACCACCATAACCCACTGCTGCTATGGCCTCTCCCC
GCGCCTCAACCTCGTCACCAACAGCATTGTCCTCGTCCTCTGGCTCATCG
CCCTCGGTCTCCTAAGCTGGAGCATGTCCCACACCATCCTAACGACCTGC
AACACAACCTACTGGGGCACCTCCACCGGTATCACCGTCTGCAGGATCTA
CAAGGCCCTCTTCACCTTCACCATTGTGGCCGCGACAGCCCACATCGCCG
CCGCCGCTCTGGACATTATCGTTTACCGTCGCCAGACCCGCCTCGGTGAA
TACGATCCTATGGCCAGCAGTACAGCTCTCAACGACTACAAGATGCACAA
CCGAGACAGCAGCATCATGTCCGGCGGCGTTGGCCCTTACCCGCCCGATG
AGGCCGATCACCCCTATTACGCCAATCAACCGCATCAAGAACCCCTGTAC
CAGCATGCCCCGGAGCCGTTGTACCATCCCAGCCAGCGTATGCCGCCTCC
TCCTGCGTATGGGGCTGGCTCGTTGGAGCAGCACCATGCCGATGAAGCGG
AGGAGTACTCCGATGCTGCGCCGGTGCAGGGACGTCGGAAGCCAAGGGTG
AGGTTTAGTGCTTACGGAGGTACTGCGGGTTATAGTCAGCCGTCGGAGCA
GACGAGTTATGACCCAGCTGCGTATCGGTGAATGCGTTCCAGAGCATCAG
TCAAGCCCTCCCAATACCCCCCGATTCCATTCCATACCATTCGCTTTTTC
GGCCTGATTTCCACTTTCATTGTGGGCATTATCTTGGCCGTATTCGTCAA
CCAACTGCATAGCAACAACTACAAGCTCCCGTGGGCTTTCCTAATC back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002715-T1.utr5p1 | KJC3_002715-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:3371607..3372733 - |
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