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KJC3_002720-T1, KJC3_002720-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_002720-T1
Unique NameKJC3_002720-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:3381325..3382708-

Legend: polypeptideCDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_002720-T1 ID=KJC3_002720-T1|Name=KJC3_002720-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1384bp|location=Sequence derived from alignment at ch2:3381325..3382708- (Aspergillus niger KJC3)
ATGGGCGCTATAAGAACCATTGCACTTGTGATCCTCGGGATCTCTGGATT
TGTTTTCGTGGCGCTATTTGGGAGACTCCCTGCGTTTCGGTAGGCTGCAG
CATTTCGTTGTAAGGGCCGTGACTGATAGATGATTCCTGTAGCAAAACTC
CCATTGGTTGGCTGTATAGAGCTCTTTGGATACACATACCTAACGGCCTT
GTTTACCTTGACAGCTGGCTACTAAATGGCTGGCTGTCTCACTGCTGGAC
TTGTTCTGGCAGTTACATTCTGCACGAAAATCACCCGTTGATTCTTGTTA
GTTCATGTGCCTAATATTCAACGGTCTCCTCTAATTATAGATGTTAGATA
TTCTTCTCTTCCCTTATGATTGCAGGGCAGTGTATGTTCATCCCAACTGC
TTGGCCTAGGATTTCCACAGTCCACCATATCTGGATCCCGATCCTTGCCA
CAATGCCCTACGTTTTGCTGTATGCAAGCGTTACCACCAAGTCATTCATC
ACCACAAAAAATCATGCAGTGGAAATGGAACGCTATCCATACGATAAGGT
CATCTTCCACCCGGGGCAGCGTTGTCGCACATGTCATATTGTCAAGCCGG
CACGAAGTAAACATTGCAGCATCTGCAAAGCATGTGTCGCACGGCATGAC
CATCACTGCGTTTGGCTCATGAACTGTGTCGGACTTCACAACTACCACTA
CTTTCTTTCCATGATCTTGTCACTATGTCTCATGCTGCTCTACGGCTCAT
ACCTGGGATACACTCTCTTGTATCAAACATACAACAGGCTGATACCATCG
GACTCACCCTTGCGGACGACCCGGCAAACCTGGACTGGCTTTTGCAATAT
ATGGGCTGTAGTTATTGCTGCTGATATTCGCATTGGTGCTATTACCTTGC
TGATGACCATGACAGCACCACTGGCGGCCGCCTTTCTCGTGTACCACACC
TACTTGATTTGGGCTGGTATGACGACCAACGAAAGCTCAAAGTGGTCAGA
CTGGAAAGAAGAGGTTGCAGATGGTATGGCTTACAAATCTAGCAAGGCTG
AAATCTATAGCAGCTCACCCTTGTTGGCCGAGTATCAGAGTGCTCAGTCA
TTCTGGCCAGTGAGTAGTGATCAGGTACTCATTCTGACAGATGGTGAGCC
GCCCAAGGAAGGGTGCTTGCTATCGCAACACTCCAATGAGATCACTCAGC
CGAGCAACAAGGACGCTCCGATAGACCGGAGGTGGATTCAGGTGCAAAGT
ATGAAGGAGATTGACAACATCTATGACCTGGGATTTTGGGACAATCTGCG
TCATGTCTTGGGCTTACCCATTCGACCAAAGGTGATCTAAGTAGATAGTT
TGCTAGCTTCACTTGAATGCATATAAATCATGAC
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Coding sequence (CDS) from alignment at ch2:3381325..3382708-

>KJC3_002720-T1 ID=KJC3_002720-T1|Name=KJC3_002720-T1|organism=Aspergillus niger KJC3|type=CDS|length=3708bp|location=Sequence derived from alignment at ch2:3381325..3382708- (Aspergillus niger KJC3)
ATATTCTTCTCTTCCCTTATGATTGCAGGGCAGTGTATGTTCATCCCAAC
TGCTTGGCCTAGGATTTCCACAGTCCACCATATCTGGATCCCGATCCTTG
CCACAATGCCCTACGTTTTGCTGTATGCAAGCGTTACCACCAAGTCATTC
ATCACCACAAAAAATCATGCAGTGGAAATGGAACGCTATCCATACGATAA
GGTCATCTTCCACCCGGGGCAGCGTTGTCGCACATGTCATATTGTCAAGC
CGGCACGAAGTAAACATTGCAGCATCTGCAAAGCATGTGTCGCACGGCAT
GACCATCACTGCGTTTGGCTCATGAACTGTGTCGGACTTCACAACTACCA
CTACTTTCTTTCCATGATCTTGTCACTATGTCTCATGCTGCTCTACGGCT
CATACCTGGGATACACTCTCTTGTATCAAACATACAACAGGCTGATACCA
TCGGACTCACCCTTGCGGACGACCCGGCAAACCTGGACTGGCTTTTGCAA
TATATGGGCTGTAGTTATTGCTGCTGATATTCGCATTGGTGCTATTACCT
TGCTGATGACCATGACAGCACCACTGGCGGCCGCCTTTCTCGTGTACCAC
ACCTACTTGATTTGGGCTGGTATGACGACCAACGAAAGCTCAAAGTGGTC
AGACTGGAAAGAAGAGGTTGCAGATGGTATGGCTTACAAATCTAGCAAGG
CTGAAATCTATAGCAGCTCACCCTTGTTGGCCGAGTATCAGAGTGCTCAG
TCATTCTGGCCAGTGAGTAGTGATCAGGTACTCATTCTGACAGATGGTGA
GCCGCCCAAGGAAGGGTGCTTGCTATCGCAACACTCCAATGAGATCACTC
AGCCGAGCAACAAGGACGCTCCGATAGACCGGAGGTGGATTCAGGTGCAA
AGTATGAAGGAGATTGACAACATCTATGACCTGGGATTTTGGGACAATCT
GCGTCATGTCTTGGGCTTACCCATTCGACCAAAGGTGATCTAACAAAACT
CCCATTGGTTGGCTGTATAGAGCTCTTTGGATACACATACCTAACGGCCT
TGTTTACCTTGACAGCTGGCTACTAAATGGCTGGCTGTCTCACTGCTGGA
CTTGTTCTGGCAGTTACATTCTGCACGAAAATCACCCGTTGATTCTTATG
GGCGCTATAAGAACCATTGCACTTGTGATCCTCGGGATCTCTGGATTTGT
TTTCGTGGCGCTATTTGGGAGACTCCCTGCGTTTCGATATTCTTCTCTTC
CCTTATGATTGCAGGGCAGTGTATGTTCATCCCAACTGCTTGGCCTAGGA
TTTCCACAGTCCACCATATCTGGATCCCGATCCTTGCCACAATGCCCTAC
GTTTTGCTGTATGCAAGCGTTACCACCAAGTCATTCATCACCACAAAAAA
TCATGCAGTGGAAATGGAACGCTATCCATACGATAAGGTCATCTTCCACC
CGGGGCAGCGTTGTCGCACATGTCATATTGTCAAGCCGGCACGAAGTAAA
CATTGCAGCATCTGCAAAGCATGTGTCGCACGGCATGACCATCACTGCGT
TTGGCTCATGAACTGTGTCGGACTTCACAACTACCACTACTTTCTTTCCA
TGATCTTGTCACTATGTCTCATGCTGCTCTACGGCTCATACCTGGGATAC
ACTCTCTTGTATCAAACATACAACAGGCTGATACCATCGGACTCACCCTT
GCGGACGACCCGGCAAACCTGGACTGGCTTTTGCAATATATGGGCTGTAG
TTATTGCTGCTGATATTCGCATTGGTGCTATTACCTTGCTGATGACCATG
ACAGCACCACTGGCGGCCGCCTTTCTCGTGTACCACACCTACTTGATTTG
GGCTGGTATGACGACCAACGAAAGCTCAAAGTGGTCAGACTGGAAAGAAG
AGGTTGCAGATGGTATGGCTTACAAATCTAGCAAGGCTGAAATCTATAGC
AGCTCACCCTTGTTGGCCGAGTATCAGAGTGCTCAGTCATTCTGGCCAGT
GAGTAGTGATCAGGTACTCATTCTGACAGATGGTGAGCCGCCCAAGGAAG
GGTGCTTGCTATCGCAACACTCCAATGAGATCACTCAGCCGAGCAACAAG
GACGCTCCGATAGACCGGAGGTGGATTCAGGTGCAAAGTATGAAGGAGAT
TGACAACATCTATGACCTGGGATTTTGGGACAATCTGCGTCATGTCTTGG
GCTTACCCATTCGACCAAAGGTGATCTAACAAAACTCCCATTGGTTGGCT
GTATAGAGCTCTTTGGATACACATACCTAACGGCCTTGTTTACCTTGACA
GCTGGCTACTAAATGGCTGGCTGTCTCACTGCTGGACTTGTTCTGGCAGT
TACATTCTGCACGAAAATCACCCGTTGATTCTTATGGGCGCTATAAGAAC
CATTGCACTTGTGATCCTCGGGATCTCTGGATTTGTTTTCGTGGCGCTAT
TTGGGAGACTCCCTGCGTTTCGATATTCTTCTCTTCCCTTATGATTGCAG
GGCAGTGTATGTTCATCCCAACTGCTTGGCCTAGGATTTCCACAGTCCAC
CATATCTGGATCCCGATCCTTGCCACAATGCCCTACGTTTTGCTGTATGC
AAGCGTTACCACCAAGTCATTCATCACCACAAAAAATCATGCAGTGGAAA
TGGAACGCTATCCATACGATAAGGTCATCTTCCACCCGGGGCAGCGTTGT
CGCACATGTCATATTGTCAAGCCGGCACGAAGTAAACATTGCAGCATCTG
CAAAGCATGTGTCGCACGGCATGACCATCACTGCGTTTGGCTCATGAACT
GTGTCGGACTTCACAACTACCACTACTTTCTTTCCATGATCTTGTCACTA
TGTCTCATGCTGCTCTACGGCTCATACCTGGGATACACTCTCTTGTATCA
AACATACAACAGGCTGATACCATCGGACTCACCCTTGCGGACGACCCGGC
AAACCTGGACTGGCTTTTGCAATATATGGGCTGTAGTTATTGCTGCTGAT
ATTCGCATTGGTGCTATTACCTTGCTGATGACCATGACAGCACCACTGGC
GGCCGCCTTTCTCGTGTACCACACCTACTTGATTTGGGCTGGTATGACGA
CCAACGAAAGCTCAAAGTGGTCAGACTGGAAAGAAGAGGTTGCAGATGGT
ATGGCTTACAAATCTAGCAAGGCTGAAATCTATAGCAGCTCACCCTTGTT
GGCCGAGTATCAGAGTGCTCAGTCATTCTGGCCAGTGAGTAGTGATCAGG
TACTCATTCTGACAGATGGTGAGCCGCCCAAGGAAGGGTGCTTGCTATCG
CAACACTCCAATGAGATCACTCAGCCGAGCAACAAGGACGCTCCGATAGA
CCGGAGGTGGATTCAGGTGCAAAGTATGAAGGAGATTGACAACATCTATG
ACCTGGGATTTTGGGACAATCTGCGTCATGTCTTGGGCTTACCCATTCGA
CCAAAGGTGATCTAACAAAACTCCCATTGGTTGGCTGTATAGAGCTCTTT
GGATACACATACCTAACGGCCTTGTTTACCTTGACAGCTGGCTACTAAAT
GGCTGGCTGTCTCACTGCTGGACTTGTTCTGGCAGTTACATTCTGCACGA
AAATCACCCGTTGATTCTTATGGGCGCTATAAGAACCATTGCACTTGTGA
TCCTCGGGATCTCTGGATTTGTTTTCGTGGCGCTATTTGGGAGACTCCCT
GCGTTTCG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0016409palmitoyltransferase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
SWF1KJC3_002720Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002720-T1KJC3_002720-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002720-T1.cdsKJC3_002720-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002720-T1.utr3p1KJC3_002720-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002720-T1.exon3KJC3_002720-T1.exon3Aspergillus niger KJC3exon
KJC3_002720-T1.exon2KJC3_002720-T1.exon2Aspergillus niger KJC3exon
KJC3_002720-T1.exon1KJC3_002720-T1.exon1Aspergillus niger KJC3exon


Properties
Property NameValue
DBxrefInterPro:IPR001594
DBxrefPFAM:PF01529
Productpalmitoyltransferase swf1
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:3381325..3382708 -
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