You are here

Home

KJC3_002736-T1, KJC3_002736-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_002736-T1
Unique NameKJC3_002736-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:3429414..3430100-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_002736-T1 ID=KJC3_002736-T1|Name=KJC3_002736-T1|organism=Aspergillus niger KJC3|type=mRNA|length=687bp|location=Sequence derived from alignment at ch2:3429414..3430100- (Aspergillus niger KJC3)
ATGTCCGAACAAACCATAACCCTGCACACCTACTTCCGCTCCTCCTGCTC
CGCGCGCCTCCGCATCGCCCTCAACCTAAAATCCCTCCCCTACACCTCCA
TCCCCATCAACCTACTCAAAAACGAGCACCACCAGAGCCAAAACACATCC
CTAAACCCCTCCGCCAGCGTGCCCACCCTCATCATCGAAAACCCCGATGG
AAAATCAATCATAATCCCCCAATCCCTTGCCGCGCTCGAATACCTCGAAG
AAACCCACCCCCAAGCGCACCCCCTCCTCCCACCACTCTCCGACCCCACC
GCGCGCGCAACAGTCCGCACCCTCTCCAGCATCATCGCCTGCGACGTGCA
GCCGGTCACGAACATGCGGATCCTGAAGCGGGTGGCGCCGCTCGGTGTGG
ACAGGGAAACATGGTCGAAGGATTTAGTGGAGGATGGGTTCCGGGCGTAC
GAGGCTATTGCGGAGAAAACAGCAGGAAAATATAGTGTTGGAGATGAGAT
TACCTTGGCGGACGTATGTCTTTTGCCTGCTGTTTGGGGGGCGGAGAGGG
TAGGTGTGGATTTGGGGGATTTTCCGGTTATTAAGGGGGTTAGGGAGAGG
CTGGAAGAGGTGGAGGCTGTGAAGAGGGCGCATTGGAGATGTCAGGGCGA
TACGCCGGAGGAGTTTAGGGTTGGTGATAGGCAGTAA
back to top

Coding sequence (CDS) from alignment at ch2:3429414..3430100-

>KJC3_002736-T1 ID=KJC3_002736-T1|Name=KJC3_002736-T1|organism=Aspergillus niger KJC3|type=CDS|length=687bp|location=Sequence derived from alignment at ch2:3429414..3430100- (Aspergillus niger KJC3)
ATGTCCGAACAAACCATAACCCTGCACACCTACTTCCGCTCCTCCTGCTC
CGCGCGCCTCCGCATCGCCCTCAACCTAAAATCCCTCCCCTACACCTCCA
TCCCCATCAACCTACTCAAAAACGAGCACCACCAGAGCCAAAACACATCC
CTAAACCCCTCCGCCAGCGTGCCCACCCTCATCATCGAAAACCCCGATGG
AAAATCAATCATAATCCCCCAATCCCTTGCCGCGCTCGAATACCTCGAAG
AAACCCACCCCCAAGCGCACCCCCTCCTCCCACCACTCTCCGACCCCACC
GCGCGCGCAACAGTCCGCACCCTCTCCAGCATCATCGCCTGCGACGTGCA
GCCGGTCACGAACATGCGGATCCTGAAGCGGGTGGCGCCGCTCGGTGTGG
ACAGGGAAACATGGTCGAAGGATTTAGTGGAGGATGGGTTCCGGGCGTAC
GAGGCTATTGCGGAGAAAACAGCAGGAAAATATAGTGTTGGAGATGAGAT
TACCTTGGCGGACGTATGTCTTTTGCCTGCTGTTTGGGGGGCGGAGAGGG
TAGGTGTGGATTTGGGGGATTTTCCGGTTATTAAGGGGGTTAGGGAGAGG
CTGGAAGAGGTGGAGGCTGTGAAGAGGGCGCATTGGAGATGTCAGGGCGA
TACGCCGGAGGAGTTTAGGGTTGGTGATAGGCAGTAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Vocabulary: Biological Process
TermDefinition
GO:0009072aromatic amino acid family metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0003824catalytic activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_002736KJC3_002736Aspergillus niger KJC3gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002736-T1.cdsKJC3_002736-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002736-T1.exon1KJC3_002736-T1.exon1Aspergillus niger KJC3exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002736-T1KJC3_002736-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036282
DBxrefInterPro:IPR034330
DBxrefInterPro:IPR034333
DBxrefInterPro:IPR010987
DBxrefInterPro:IPR040079
DBxrefInterPro:IPR036249
DBxrefInterPro:IPR004045
DBxrefInterPro:IPR004046
DBxrefInterPro:IPR005955
DBxrefPFAM:PF13417
DBxrefPFAM:PF13409
DBxrefPFAM:PF02798
DBxrefPFAM:PF14497
DBxrefPFAM:PF00043
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:3429414..3430100 -
Powered by Drupal