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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:3437142..3439341+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_002740-T1 ID=KJC3_002740-T1|Name=KJC3_002740-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2200bp|location=Sequence derived from alignment at ch2:3437142..3439341+ (Aspergillus niger KJC3)
CCACAGACCGAAAGCTTGGCGGTTCTTGCTCGATCGTCACGTTCCTCTCC
TCACTTTTCCCTCGTGTAATTCTTTCCCCTCCCCTTCTTCCTTGCCTGTC
AATCTGCAGCTCTTACTGCGTCCCCGACGCCATTCCACACCACTGTGTCC
TCCCTCTCGATTGACGCAGCTTCTCCAACCCTCTATGGTCATGCATTGAG
CTGCAGCAACCCAGTGATAGCTCTTTCTACTCTCTCCATAGAACGCGTCC
CTCCAAGTGTTACCATCTTCACAACGTCTCTCTCCCTGGCTTGACCCCCG
CGTCCTCGTGAAACATGGAAGAAGGCGCGTCTTCTCGTCCGACAGAAACC
CCCGAAGGCTCTGCCGGCGGTGATGATCACAATGCCGTCTCGAGTGCCGC
GAAGAATCCGGCCTTGAAGGATCGGAAATGCCAGTATTGCCATCAAGCGT
TCACCTCTTCGTCCCTCGGTCGCCATCTGGATCAATTCCTTTTCAAGAAA
AAACCGGACGGTATTCATGATGTTGAGGAAATCCGGCGCATTCGGAGCGG
TATCACTCGCCGACAGGCCCGTACCTCCTCTGGTAGACGCGATACTCCCG
AGAGAACAACAGGCAAAGGCCAGCAGGACTCCTACACTCCGGGCGATTCG
GGCTCAAAGTCACGCGATGGTGCGTATAGGATGATGTTCAACACGCCTAC
GTGGCATGCGACCGGTGTGATCAACGATATTCCCAATCCTAGCCAGTCAC
AGGATAATAGCTCGTCTCACTCGCGCATTGCGCCCTCGCAATCACGCACT
GGGCCGCTTTCATTTCCGGATAGAGGTGGCTCAAATAATCCGGATACCAT
GAGGGCATTGGAGCTGGCTCTGCGCGAAGTACTAGATAATATCAAAGCTG
CAACGTATGTACATCACCTGGCATTGCTAACTGCGCTTTCATTCGACGGC
ATTGTTAGTACATGATCGACTGGAGGGCTAATTTAAATATGCTCTATAGT
TCCAGGATGCGCCCCAGACTCTCCCCGTTCGATTTCGACATTCAGGCGCA
AACGTTCCCTTCCCTCTGCCTGCAGTTGCTGCCTCCCCCTCCCAGTCTAT
TCGCAACAAGTCCATTCCCGTCTCCGTCATCATTCCCTCTCCAGCCGCCG
GGAGTGGAGCATCTGGACATTGTCCGGCAAGCACTTCGCGCGAAGATCGA
TCAATGGCAGTCGGATCAGCGCACCGCCGAGTCCAACAACAACTCCCAGT
CAGGGAGGCCAAGCCTAGGCCTAGATTCGAATATGATCAGCCGGAGCGCG
CAGCAGCACGAAGACTTAAGTCTGCGGCACTTGGAGTTGGCATTCAAACA
CTGGGCCTCACTGCCGACAGATGCAAGGAGAGACGCATGGCAGCTCGAGA
TCACGCGCGCATTCGCAAGAGAAATGGAAAAGCGAAAGTCGCTGGATGAC
CAGCTCGCGCGCGTCCAACAGGAGGCAAACCAACTTCGTGCCCAGGTAGA
AAGACTAGGCTCCTGCCAATGGCCAAGGGAATTCGCAATCTTTCCTCCCG
ACACGCTCCCACTACCACGAGACGTCGCCCGAGAACTCGATGCCAAGGAG
AGCCAAATCAGCCCTACCGCCTCTCGCTGGGACTACGACAATGTCGTCGC
GAAATGGAAACGAGTCGTTATGCACGACAGAGGCATGGGCCGCGTCGGCA
TCGGTTACGCAAACAGCATACAGGATGAATATCGCAGCGCAGAACCCAGA
CACCCCCCAACTACCACCGCACCCGCAACCACCAGCGACGACCCAACCCG
TTCCAGGATGTTGAATCCCCCGTCGGCCCTGAGCCCCGGCCCATCCCCCT
CAAACACGAGCGGTGGTGGACCCTCCGCGCCTCCTAGCCAGCAGACCTCG
CCCTATATGCACCAACACGACAGCACCCGGAGTCCCGACGACGGTCCGCA
AGCTAAACGGCCTCGCCTGATGAACGGTCACCACATCGAGAACCCTCCGC
ACGCTCCTGACGGTGCCCCTGCTCCTACTGGGCCCCCTCCTCCTACATCT
ACAACCACGACTACGGCTACGAACCAGGGACCCGCTGCCGCTCCCCCCTC
CACTACTTCCTGGACTACAACTAGTGCCCAACCATCCGGGATAGCTTCAA
ACCCGGCCAACCCTGCAGGTCCCACGCCCCCGCCATCCTGCTCCGGGTAA
back to topCoding sequence (CDS) from alignment at ch2:3437142..3439341+ >KJC3_002740-T1 ID=KJC3_002740-T1|Name=KJC3_002740-T1|organism=Aspergillus niger KJC3|type=CDS|length=3582bp|location=Sequence derived from alignment at ch2:3437142..3439341+ (Aspergillus niger KJC3)
ATGGAAGAAGGCGCGTCTTCTCGTCCGACAGAAACCCCCGAAGGCTCTGC
CGGCGGTGATGATCACAATGCCGTCTCGAGTGCCGCGAAGAATCCGGCCT
TGAAGGATCGGAAATGCCAGTATTGCCATCAAGCGTTCACCTCTTCGTCC
CTCGGTCGCCATCTGGATCAATTCCTTTTCAAGAAAAAACCGGACGGTAT
TCATGATGTTGAGGAAATCCGGCGCATTCGGAGCGGTATCACTCGCCGAC
AGGCCCGTACCTCCTCTGGTAGACGCGATACTCCCGAGAGAACAACAGGC
AAAGGCCAGCAGGACTCCTACACTCCGGGCGATTCGGGCTCAAAGTCACG
CGATGGTGCGTATAGGATGATGTTCAACACGCCTACGTGGCATGCGACCG
GTGTGATCAACGATATTCCCAATCCTAGCCAGTCACAGGATAATAGCTCG
TCTCACTCGCGCATTGCGCCCTCGCAATCACGCACTGGGCCGCTTTCATT
TCCGGATAGAGGTGGCTCAAATAATCCGGATACCATGAGGGCATTGGAGC
TGGCTCTGCGCGAAGTACTAGATAATATCAAAGCTGCAACTTCCAGGATG
CGCCCCAGACTCTCCCCGTTCGATTTCGACATTCAGGCGCAAACGTTCCC
TTCCCTCTGCCTGCAGTTGCTGCCTCCCCCTCCCAGTCTATTCGCAACAA
GTCCATTCCCGTCTCCGTCATCATTCCCTCTCCAGCCGCCGGGAGTGGAG
CATCTGGACATTGTCCGGCAAGCACTTCGCGCGAAGATCGATCAATGGCA
GTCGGATCAGCGCACCGCCGAGTCCAACAACAACTCCCAGTCAGGGAGGC
CAAGCCTAGGCCTAGATTCGAATATGATCAGCCGGAGCGCGCAGCAGCAC
GAAGACTTAAGTCTGCGGCACTTGGAGTTGGCATTCAAACACTGGGCCTC
ACTGCCGACAGATGCAAGGAGAGACGCATGGCAGCTCGAGATCACGCGCG
CATTCGCAAGAGAAATGGAAAAGCGAAAGTCGCTGGATGACCAGCTCGCG
CGCGTCCAACAGGAGGCAAACCAACTTCGTGCCCAGGTAGAAAGACTAGG
CTCCTGCCAATGGCCAAGGGAATTCGCAATCTTTCCTCCCGACACGCTCC
CACTACCACGAGACGTCGCCCGAGAACTCGATGCCAAGGAGAGCCAAATC
AGCCCTACCGCCTCTCGCTGGGACTACGACAATGTCGTCGCGAAATGGAA
ACGAGTCGTTATGCACGACAGAGGCATGGGCCGCGTCGGCATCGGTTACG
CAAACAGCATACAGGATGAATATCGCAGCGCAGAACCCAGACACCCCCCA
ACTACCACCGCACCCGCAACCACCAGCGACGACCCAACCCGTTCCAGGAT
GTTGAATCCCCCGTCGGCCCTGAGCCCCGGCCCATCCCCCTCAAACACGA
GCGGTGGTGGACCCTCCGCGCCTCCTAGCCAGCAGACCTCGCCCTATATG
CACCAACACGACAGCACCCGGAGTCCCGACGACGGTCCGCAAGCTAAACG
GCCTCGCCTGATGAACGGTCACCACATCGAGAACCCTCCGCACGCTCCTG
ACGGTGCCCCTGCTCCTACTGGGCCCCCTCCTCCTACATCTACAACCACG
ACTACGGCTACGAACCAGGGACCCGCTGCCGCTCCCCCCTCCACTACTTC
CTGGACTACAACTAGTGCCCAACCATCCGGGATAGCTTCAAACCCGGCCA
ACCCTGCAGGTCCCACGCCCCCGCCATCCTGCTCCGGGTAAATGGAAGAA
GGCGCGTCTTCTCGTCCGACAGAAACCCCCGAAGGCTCTGCCGGCGGTGA
TGATCACAATGCCGTCTCGAGTGCCGCGAAGAATCCGGCCTTGAAGGATC
GGAAATGCCAGTATTGCCATCAAGCGTTCACCTCTTCGTCCCTCGGTCGC
CATCTGGATCAATTCCTTTTCAAGAAAAAACCGGACGGTATTCATGATGT
TGAGGAAATCCGGCGCATTCGGAGCGGTATCACTCGCCGACAGGCCCGTA
CCTCCTCTGGTAGACGCGATACTCCCGAGAGAACAACAGGCAAAGGCCAG
CAGGACTCCTACACTCCGGGCGATTCGGGCTCAAAGTCACGCGATGGTGC
GTATAGGATGATGTTCAACACGCCTACGTGGCATGCGACCGGTGTGATCA
ACGATATTCCCAATCCTAGCCAGTCACAGGATAATAGCTCGTCTCACTCG
CGCATTGCGCCCTCGCAATCACGCACTGGGCCGCTTTCATTTCCGGATAG
AGGTGGCTCAAATAATCCGGATACCATGAGGGCATTGGAGCTGGCTCTGC
GCGAAGTACTAGATAATATCAAAGCTGCAACTTCCAGGATGCGCCCCAGA
CTCTCCCCGTTCGATTTCGACATTCAGGCGCAAACGTTCCCTTCCCTCTG
CCTGCAGTTGCTGCCTCCCCCTCCCAGTCTATTCGCAACAAGTCCATTCC
CGTCTCCGTCATCATTCCCTCTCCAGCCGCCGGGAGTGGAGCATCTGGAC
ATTGTCCGGCAAGCACTTCGCGCGAAGATCGATCAATGGCAGTCGGATCA
GCGCACCGCCGAGTCCAACAACAACTCCCAGTCAGGGAGGCCAAGCCTAG
GCCTAGATTCGAATATGATCAGCCGGAGCGCGCAGCAGCACGAAGACTTA
AGTCTGCGGCACTTGGAGTTGGCATTCAAACACTGGGCCTCACTGCCGAC
AGATGCAAGGAGAGACGCATGGCAGCTCGAGATCACGCGCGCATTCGCAA
GAGAAATGGAAAAGCGAAAGTCGCTGGATGACCAGCTCGCGCGCGTCCAA
CAGGAGGCAAACCAACTTCGTGCCCAGGTAGAAAGACTAGGCTCCTGCCA
ATGGCCAAGGGAATTCGCAATCTTTCCTCCCGACACGCTCCCACTACCAC
GAGACGTCGCCCGAGAACTCGATGCCAAGGAGAGCCAAATCAGCCCTACC
GCCTCTCGCTGGGACTACGACAATGTCGTCGCGAAATGGAAACGAGTCGT
TATGCACGACAGAGGCATGGGCCGCGTCGGCATCGGTTACGCAAACAGCA
TACAGGATGAATATCGCAGCGCAGAACCCAGACACCCCCCAACTACCACC
GCACCCGCAACCACCAGCGACGACCCAACCCGTTCCAGGATGTTGAATCC
CCCGTCGGCCCTGAGCCCCGGCCCATCCCCCTCAAACACGAGCGGTGGTG
GACCCTCCGCGCCTCCTAGCCAGCAGACCTCGCCCTATATGCACCAACAC
GACAGCACCCGGAGTCCCGACGACGGTCCGCAAGCTAAACGGCCTCGCCT
GATGAACGGTCACCACATCGAGAACCCTCCGCACGCTCCTGACGGTGCCC
CTGCTCCTACTGGGCCCCCTCCTCCTACATCTACAACCACGACTACGGCT
ACGAACCAGGGACCCGCTGCCGCTCCCCCCTCCACTACTTCCTGGACTAC
AACTAGTGCCCAACCATCCGGGATAGCTTCAAACCCGGCCAACCCTGCAG
GTCCCACGCCCCCGCCATCCTGCTCCGGGTAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002740-T1.utr5p1 | KJC3_002740-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:3437142..3439341 + |
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