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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:3446383..3447453+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_002742-T1 ID=KJC3_002742-T1|Name=KJC3_002742-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1071bp|location=Sequence derived from alignment at ch2:3446383..3447453+ (Aspergillus niger KJC3)
ATGCATCCTCACGTCCTCTGCCTAGGGCTGCTGCTTGCTAGTAGTAATGC
AGCTGCAGTTTCCAGCACTGCCAGTTCTACAGCTGCATCCCCTCTGGTGA
CCACTCTGAACATCACTGTAGAAGGTGGAAACTATCCACTGCACATCTTC
CTATTGAATACAAGTACACCTAACAAATACTCCAGATTTATGGAACCTAT
ATATTGGCCCCGTTGAGACTGCCTCGATCAACACCACCGTTGAACCTACT
CCAATTCCATCTGCCGAACTGATCCCCCCTCCCCCACTCTACTACCCCTC
CTACTTACCAGGAGCCCAGATCCCAGGACTACGAAGAAACGAAAGCTGGT
CATTCCCCAAAGGGTTCTGGTGGGGCGTATCAAGCGCCTCATATCAAGTC
GAAGGGGCCGTCAAAGCAGATGGCCGGGGCCCTAGCTTATGGGATGCATT
TACCCACCGAGCCATGAGCGTAGCCGACAACCAGACAGGAGATGTCGCGA
TTAACCAGTATTACATGTACAAGCAAGGTACTCCTCCTATCAAGCCCGAA
AAGCTTTATCTCTCTAATATGTCAATACCGTAGACATCCAACGCATCGCC
GCGATGGGCGTACCAGCATACTCCTTCTCTGTCTCCTGGTCCAGAATCTT
CCCCTTCGGCAACGGCCCCATCAACGAAGCAGGTCTGCAGTACTATGACG
ACGTAATCAACACCTGCCTAGAATACGGCGTCAAACCCCAAGTGACACTG
TACCATTGGGACCTGCCCTTATACCTCCAGCTCTCCTACGGAGGCTGGAC
AAGCGAAAAGATCGTCGACGACTTCGTCGCCTATGCCAAGGTCCTCCTAG
AGCGATGGGGCGACAAAGTCTGGCAATGGTACACATTCAACGAACCGCAC
TCCTTCTGCGGCGAATACCCAGTACCAGATGGATATTTCCCGCGCACCAC
GTCCATCCCAGACGTCCAGCAACCCTACTGGTGCGGACACTACATGCTCA
TCGCCGCGGGAAAAACATACCAACTCGCACGCTCAATGAACATCACAGCC
CCCATCAGCATCAAAGAATAA back to topCoding sequence (CDS) from alignment at ch2:3446383..3447453+ >KJC3_002742-T1 ID=KJC3_002742-T1|Name=KJC3_002742-T1|organism=Aspergillus niger KJC3|type=CDS|length=2862bp|location=Sequence derived from alignment at ch2:3446383..3447453+ (Aspergillus niger KJC3)
ATGCATCCTCACGTCCTCTGCCTAGGGCTGCTGCTTGCTAGTAGTAATGC
AGCTGCAGTTTCCAGCACTGCCAGTTCTACAGCTGCATCCCCTCTGGTGA
CCACTCTGAACATCACTGTAGAAGATTTATGGAACCTATATATTGGCCCC
GTTGAGACTGCCTCGATCAACACCACCGTTGAACCTACTCCAATTCCATC
TGCCGAACTGATCCCCCCTCCCCCACTCTACTACCCCTCCTACTTACCAG
GAGCCCAGATCCCAGGACTACGAAGAAACGAAAGCTGGTCATTCCCCAAA
GGGTTCTGGTGGGGCGTATCAAGCGCCTCATATCAAGTCGAAGGGGCCGT
CAAAGCAGATGGCCGGGGCCCTAGCTTATGGGATGCATTTACCCACCGAG
CCATGAGCGTAGCCGACAACCAGACAGGAGATGTCGCGATTAACCAGTAT
TACATGTACAAGCAAGACATCCAACGCATCGCCGCGATGGGCGTACCAGC
ATACTCCTTCTCTGTCTCCTGGTCCAGAATCTTCCCCTTCGGCAACGGCC
CCATCAACGAAGCAGGTCTGCAGTACTATGACGACGTAATCAACACCTGC
CTAGAATACGGCGTCAAACCCCAAGTGACACTGTACCATTGGGACCTGCC
CTTATACCTCCAGCTCTCCTACGGAGGCTGGACAAGCGAAAAGATCGTCG
ACGACTTCGTCGCCTATGCCAAGGTCCTCCTAGAGCGATGGGGCGACAAA
GTCTGGCAATGGTACACATTCAACGAACCGCACTCCTTCTGCGGCGAATA
CCCAGTACCAGATGGATATTTCCCGCGCACCACGTCCATCCCAGACGTCC
AGCAACCCTACTGGTGCGGACACTACATGCTCATCGCCGCGGGAAAAACA
TACCAACTCGCACGCTCAATGAACATCACAGCCCCCATCAGCATCAAAGA
ATAAATGCATCCTCACGTCCTCTGCCTAGGGCTGCTGCTTGCTAGTAGTA
ATGCAGCTGCAGTTTCCAGCACTGCCAGTTCTACAGCTGCATCCCCTCTG
GTGACCACTCTGAACATCACTGTAGAAGATTTATGGAACCTATATATTGG
CCCCGTTGAGACTGCCTCGATCAACACCACCGTTGAACCTACTCCAATTC
CATCTGCCGAACTGATCCCCCCTCCCCCACTCTACTACCCCTCCTACTTA
CCAGGAGCCCAGATCCCAGGACTACGAAGAAACGAAAGCTGGTCATTCCC
CAAAGGGTTCTGGTGGGGCGTATCAAGCGCCTCATATCAAGTCGAAGGGG
CCGTCAAAGCAGATGGCCGGGGCCCTAGCTTATGGGATGCATTTACCCAC
CGAGCCATGAGCGTAGCCGACAACCAGACAGGAGATGTCGCGATTAACCA
GTATTACATGTACAAGCAAGACATCCAACGCATCGCCGCGATGGGCGTAC
CAGCATACTCCTTCTCTGTCTCCTGGTCCAGAATCTTCCCCTTCGGCAAC
GGCCCCATCAACGAAGCAGGTCTGCAGTACTATGACGACGTAATCAACAC
CTGCCTAGAATACGGCGTCAAACCCCAAGTGACACTGTACCATTGGGACC
TGCCCTTATACCTCCAGCTCTCCTACGGAGGCTGGACAAGCGAAAAGATC
GTCGACGACTTCGTCGCCTATGCCAAGGTCCTCCTAGAGCGATGGGGCGA
CAAAGTCTGGCAATGGTACACATTCAACGAACCGCACTCCTTCTGCGGCG
AATACCCAGTACCAGATGGATATTTCCCGCGCACCACGTCCATCCCAGAC
GTCCAGCAACCCTACTGGTGCGGACACTACATGCTCATCGCCGCGGGAAA
AACATACCAACTCGCACGCTCAATGAACATCACAGCCCCCATCAGCATCA
AAGAATAAATGCATCCTCACGTCCTCTGCCTAGGGCTGCTGCTTGCTAGT
AGTAATGCAGCTGCAGTTTCCAGCACTGCCAGTTCTACAGCTGCATCCCC
TCTGGTGACCACTCTGAACATCACTGTAGAAGATTTATGGAACCTATATA
TTGGCCCCGTTGAGACTGCCTCGATCAACACCACCGTTGAACCTACTCCA
ATTCCATCTGCCGAACTGATCCCCCCTCCCCCACTCTACTACCCCTCCTA
CTTACCAGGAGCCCAGATCCCAGGACTACGAAGAAACGAAAGCTGGTCAT
TCCCCAAAGGGTTCTGGTGGGGCGTATCAAGCGCCTCATATCAAGTCGAA
GGGGCCGTCAAAGCAGATGGCCGGGGCCCTAGCTTATGGGATGCATTTAC
CCACCGAGCCATGAGCGTAGCCGACAACCAGACAGGAGATGTCGCGATTA
ACCAGTATTACATGTACAAGCAAGACATCCAACGCATCGCCGCGATGGGC
GTACCAGCATACTCCTTCTCTGTCTCCTGGTCCAGAATCTTCCCCTTCGG
CAACGGCCCCATCAACGAAGCAGGTCTGCAGTACTATGACGACGTAATCA
ACACCTGCCTAGAATACGGCGTCAAACCCCAAGTGACACTGTACCATTGG
GACCTGCCCTTATACCTCCAGCTCTCCTACGGAGGCTGGACAAGCGAAAA
GATCGTCGACGACTTCGTCGCCTATGCCAAGGTCCTCCTAGAGCGATGGG
GCGACAAAGTCTGGCAATGGTACACATTCAACGAACCGCACTCCTTCTGC
GGCGAATACCCAGTACCAGATGGATATTTCCCGCGCACCACGTCCATCCC
AGACGTCCAGCAACCCTACTGGTGCGGACACTACATGCTCATCGCCGCGG
GAAAAACATACCAACTCGCACGCTCAATGAACATCACAGCCCCCATCAGC
ATCAAAGAATAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0005975 | carbohydrate metabolic process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | SECRETED:SignalP(1-19) |
| Note | CAZy:GH5_19 |
| Note | CAZy:GH1 |
| DBxref | InterPro:IPR017853 |
| DBxref | InterPro:IPR033132 |
| DBxref | InterPro:IPR001360 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:3446383..3447453 + |
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